Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p051673 Quercus lobata HOM05D000108 ORTHO05D006029 3.5e-83 311.6 162 100.0
QL03p004313 Quercus lobata HOM05D000108 ORTHO05D006029 6.5e-61 237.7 141 89.4
CiPaw.07G014600 Carya illinoinensis HOM05D000108 ORTHO05D006029 1.9e-44 183.0 144 70.8
Manes.08G123200 Manihot esculenta HOM05D000108 ORTHO05D006029 1.1e-39 167.2 144 63.2
Cfa006545 Carpinus fangiana HOM05D000108 ORTHO05D006029 4.1e-39 165.2 144 65.3
CSS0044833 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D006029 9.1e-39 164.1 144 66.7
CSS0038768 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D006029 6.5e-37 157.9 144 64.6
Haze_04247 Corylus avellana HOM05D000108 ORTHO05D006029 6.5e-37 157.9 155 60.6
Haze_04248 Corylus avellana HOM05D000108 ORTHO05D006029 4.2e-36 155.2 161 60.2
Dinv40258 Davidia involucrata HOM05D000108 ORTHO05D006029 3.6e-35 152.1 144 63.2
Lj9A682T48 Lonicera japonica HOM05D000108 ORTHO05D006029 2.3e-34 149.4 123 68.3
Potri.005G038900 Populus trichocarpa HOM05D000108 ORTHO05D006029 3.9e-34 148.7 144 59.7
Actinidia19806 Actinidia chinensis HOM05D000273 ORTHO05D006029 3.3e-33 145.6 124 65.3
Atru.chr11.1582 Acer truncatum HOM05D000108 ORTHO05D006029 3.7e-32 142.1 143 59.4
Sabra05G0037700 Salix brachista HOM05D000108 ORTHO05D006029 1.8e-31 139.8 135 57.8
Prupe.6G330200 Prunus persica HOM05D000108 ORTHO05D006029 2.4e-31 139.4 153 56.2
CANSAT25G0558 Cannabis sativa HOM05D000108 ORTHO05D006029 4.1e-31 138.7 151 56.3
Rhsim05G0144600 Rhododendron simsii HOM05D000108 ORTHO05D006029 7.2e-28 127.9 145 55.9
Nn4g26164 Nelumbo nucifera HOM05D000108 ORTHO05D006029 5.2e-26 121.7 144 52.1
RcHm_v2.0_Chr3g0454101 Rosa chinensis HOM05D000108 ORTHO05D006029 1.1e-25 120.6 145 49.0
Cpa.g.sc48.12 Carica papaya HOM05D000108 ORTHO05D006029 2.6e-25 119.4 134 51.5
vmacro19645 Vaccinium macrocarpon HOM05D000108 ORTHO05D006029 9.7e-25 117.5 151 50.3
Cc02_g32690 Coffea canephora HOM05D000108 ORTHO05D006029 1.3e-24 117.1 120 57.5
MBI05_g33287_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D006029 1.3e-24 117.1 144 48.6
GSVIVG01000008001 Vitis vinifera HOM05D000108 ORTHO05D006029 2.8e-24 115.9 93 68.8
FAN05G0886 Fragaria x ananassa HOM05D000108 ORTHO05D006029 6.3e-24 114.8 145 47.6
Sed0006246 Sechium edule HOM05D000108 ORTHO05D006029 6.3e-24 114.8 148 50.0
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 8.2e-24 114.4 116 57.8
FAN14G1533 Fragaria x ananassa HOM05D000108 ORTHO05D006029 1.4e-23 113.6 145 46.9
FAN14G3015 Fragaria x ananassa HOM05D000108 ORTHO05D006029 1.4e-23 113.6 145 46.9
FAN05G0788 Fragaria x ananassa HOM05D000108 ORTHO05D006029 1.8e-23 113.2 145 46.9
FAN02G0002 Fragaria x ananassa HOM05D000108 ORTHO05D006029 2.4e-23 112.8 145 46.9
Oeu015682.1 Olea europaea HOM05D000108 ORTHO05D006029 3.1e-23 112.5 111 56.8
MELO3C010147.2 Cucumis melo HOM05D000108 ORTHO05D006029 5.3e-23 111.7 147 49.0
Glyma.15G256400 Glycine max HOM05D000108 ORTHO05D006029 9.1e-23 110.9 144 48.6
Gohir.D11G273200 Gossypium hirsutum HOM05D000108 ORTHO05D006029 1.2e-22 110.5 141 48.2
Duzib128G2000 Durio zibethinus HOM05D000108 ORTHO05D006029 2.0e-22 109.8 136 50.0
Gorai.007G294600 Gossypium raimondii HOM05D000108 ORTHO05D006029 7.7e-22 107.8 138 47.1
Nitab4.5_0004940g0140 Nicotiana tabacum HOM05D000108 ORTHO05D006029 7.7e-22 107.8 115 53.0
Glyma.08G170500 Glycine max HOM05D000108 ORTHO05D006029 3.8e-21 105.5 146 47.3
CsaV3_1G045180 Cucumis sativus L. HOM05D000108 ORTHO05D006029 6.5e-21 104.8 148 49.3
FAN09G1914 Fragaria x ananassa HOM05D000273 ORTHO05D006029 6.5e-21 104.8 118 52.5
SHI18209 Sapria himalayana HOM05D000108 ORTHO05D006029 1.1e-20 104.0 149 44.3
Phvul.006G094111 Phaseolus vulgaris HOM05D000108 ORTHO05D006029 1.5e-20 103.6 145 46.2
PGSC0003DMG400028602 Solanum tuberosum HOM05D000108 ORTHO05D006029 3.2e-20 102.4 115 50.4
Migut.B01216 Erythranthe guttata HOM05D000108 ORTHO05D006029 5.5e-20 101.7 111 52.3
Gohir.A11G263066 Gossypium hirsutum HOM05D000108 ORTHO05D006029 5.5e-20 101.7 139 46.0
Sopen01g042210 Solanum pennellii HOM05D000108 ORTHO05D006029 5.5e-20 101.7 115 50.4
TWI56G0698 Tripterygium wilfordii HOM05D000108 ORTHO05D006029 5.5e-20 101.7 101 57.4
SalBow5G0045 Salvia bowleyana HOM05D000108 ORTHO05D006029 7.2e-20 101.3 113 54.9
Hund07044 Selenicereus undatus HOM05D000108 ORTHO05D006029 9.4e-20 100.9 107 52.3
Lj1g0019134 Lotus japonicus HOM05D000108 ORTHO05D006029 1.2e-19 100.5 160 46.2
CAN.G1134.20 Capsicum annuum HOM05D000108 ORTHO05D006029 1.8e-18 96.7 102 52.9
COL.COLO4_13517 Corchorus olitorius HOM05D000273 ORTHO05D006029 3.0e-18 95.9 121 49.6
Peaxi162Scf00434g00333 Petunia axillaris HOM05D000108 ORTHO05D006029 7.5e-17 91.3 99 53.5
FvH4_6g05340 Fragaria vesca HOM05D000108 ORTHO05D006029 9.8e-17 90.9 102 51.0
MD12G1223800 Malus domestica HOM05D000108 ORTHO05D006029 1.3e-16 90.5 133 44.4
PSO407G0355 Papaver somniferum HOM05D000108 ORTHO05D006029 1.3e-16 90.5 152 42.8
PSO210G1121 Papaver somniferum HOM05D000108 ORTHO05D006029 3.7e-16 89.0 152 43.4
VMungo0540G0498 Vigna mungo HOM05D000273 ORTHO05D000198 4.8e-16 88.6 114 48.2
Ah.06g190120 Amaranthus hybridus HOM05D000273 ORTHO05D006029 6.3e-16 88.2 124 43.5
PSO170G2040 Papaver somniferum HOM05D000108 ORTHO05D006029 1.4e-15 87.0 152 42.1
EL10Ac4g09307 Beta vulgaris HOM05D000108 ORTHO05D006029 2.4e-15 86.3 104 46.2
Solyc01g098670.3 Solanum lycopersicum HOM05D000108 ORTHO05D006029 3.1e-15 85.9 99 49.5
Thecc.05G308300 Theobroma cacao HOM05D000108 ORTHO05D006029 5.4e-15 85.1 98 54.1
CARHR291490 Cardamine hirsuta HOM05D000108 ORTHO05D006029 9.1e-15 84.3 109 47.7
SalBow5G4695 Salvia bowleyana HOM05D000108 ORTHO05D006029 9.1e-15 84.3 74 64.9
Sp1g24030 Schrenkiella parvula HOM05D000108 ORTHO05D006029 9.1e-15 84.3 125 44.8
ClCG03G010060 Citrullus lanatus HOM05D000108 ORTHO05D006029 1.2e-14 84.0 101 52.5
MBI04_g27235_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D006029 1.2e-14 84.0 142 39.4
AL5G46340 Arabidopsis lyrata HOM05D000108 ORTHO05D006029 1.6e-14 83.6 111 45.9
arahy.Tifrunner.gnm1.ann1.JIGP3F Arachis hypogaea HOM05D000108 ORTHO05D006029 3.5e-14 82.4 100 49.0
DCAR_003313 Daucus carota HOM05D000108 ORTHO05D006029 4.5e-14 82.0 101 50.5
AT3G63480 Arabidopsis thaliana HOM05D000108 ORTHO05D006029 1.0e-13 80.9 109 45.9
arahy.Tifrunner.gnm1.ann1.G0F2H7 Arachis hypogaea HOM05D000108 ORTHO05D006029 1.0e-13 80.9 100 49.0
Nitab4.5_0007238g0020 Nicotiana tabacum HOM05D000108 ORTHO05D006029 1.7e-13 80.1 76 56.6
EL10Ac4g09306 Beta vulgaris HOM05D000108 ORTHO05D006029 3.8e-13 79.0 98 45.9
AUR62005109 Chenopodium quinoa HOM05D000108 ORTHO05D006029 1.1e-12 77.4 124 44.4
Carub.0005s3009 Capsella rubella HOM05D000108 ORTHO05D006029 1.9e-12 76.6 109 44.0
ATR1155G012 Amborella trichopoda HOM05D000108 ORTHO05D006029 2.5e-12 76.3 117 41.9
Eucgr.K01889 Eucalyptus grandis HOM05D000108 ORTHO05D006029 9.5e-12 74.3 104 42.3
COL.COLO4_16159 Corchorus olitorius HOM05D000108 ORTHO05D006029 1.2e-11 73.9 82 50.0
PGR102G1168 Punica granatum HOM05D000108 ORTHO05D006029 1.2e-11 73.9 147 36.1
Zm00001eb260930 Zea mays HOM05D000108 ORTHO05D006029 1.2e-11 73.9 117 41.9
TAR633G1062 Trochodendron aralioides HOM05D000108 ORTHO05D006029 1.6e-11 73.6 63 61.9
ECA246G1564 Erigeron canadensis HOM05D000108 ORTHO05D006029 1.0e-10 70.9 115 40.9
Thhalv10005951m.g Eutrema salsugineum HOM05D000108 ORTHO05D006029 6.8e-10 68.2 125 39.2
Aqoxy2G02776 Aquilegia oxysepala HOM05D000108 ORTHO05D006029 2.0e-09 66.6 162 33.3
AUR62000867 Chenopodium quinoa HOM05D000108 ORTHO05D006029 2.6e-09 66.2 99 47.5
Aa31LG10G17350 Aethionema arabicum HOM05D000108 ORTHO05D006029 7.5e-09 64.7 125 39.2
Glyma.19G237300 Glycine max HOM05D000273 ORTHO05D000198 2.2e-08 63.2 64 59.4
THA.LOC104823031 Tarenaya hassleriana HOM05D000108 ORTHO05D006029 1.4e-07 60.5 87 47.1
AUR62006355 Chenopodium quinoa HOM05D043579 ORTHO05D006029 4.5e-06 55.5 77 45.5


User provided reference genes

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