Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p051611 Quercus lobata HOM05D003580 ORTHO05D004441 4.5e-112 407.9 203 100.0
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 8.1e-61 237.7 119 98.3
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 1.1e-57 227.3 120 93.3
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 1.9e-57 226.5 119 93.3
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 1.2e-56 223.8 119 92.4
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.6e-56 223.4 149 77.2
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.3e-55 220.3 149 75.8
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.7e-55 219.9 149 76.5
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 8.7e-55 217.6 139 79.1
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 7.3e-54 214.5 119 87.4
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 9.6e-54 214.2 119 86.6
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 2.1e-53 213.0 119 86.6
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 6.2e-53 211.5 120 84.2
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 8.1e-53 211.1 119 88.2
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 8.1e-53 211.1 119 88.2
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 8.1e-53 211.1 119 84.9
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 1.1e-52 210.7 119 84.9
Cpa.g.sc272.6 Carica papaya HOM05D003580 ORTHO05D004441 4.0e-52 208.8 119 84.0
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 6.9e-52 208.0 119 85.7
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 9.0e-52 207.6 122 81.1
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 1.2e-51 207.2 119 82.4
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 2.0e-51 206.5 119 84.0
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 2.6e-51 206.1 122 80.3
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 2.6e-51 206.1 122 80.3
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 4.4e-51 205.3 119 83.2
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 4.4e-51 205.3 122 78.7
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 4.4e-51 205.3 119 84.9
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 5.8e-51 204.9 126 80.2
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 7.6e-51 204.5 119 83.2
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 1.3e-50 203.8 119 80.7
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.7e-50 203.4 119 82.4
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 1.7e-50 203.4 119 82.4
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 2.2e-50 203.0 122 81.1
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 2.2e-50 203.0 119 82.4
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.9e-50 202.6 119 82.4
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 2.9e-50 202.6 119 82.4
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 3.8e-50 202.2 147 68.7
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 3.8e-50 202.2 119 80.7
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 4.9e-50 201.8 119 82.4
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 6.4e-50 201.4 119 80.7
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 6.4e-50 201.4 119 82.4
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 6.4e-50 201.4 119 79.8
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 1.4e-49 200.3 120 79.2
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 1.9e-49 199.9 119 80.7
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 3.2e-49 199.1 119 79.8
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 4.2e-49 198.7 119 82.4
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 4.2e-49 198.7 119 79.8
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 5.4e-49 198.4 119 79.0
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 7.1e-49 198.0 119 78.2
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 7.1e-49 198.0 111 88.3
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 7.1e-49 198.0 120 81.7
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 9.3e-49 197.6 119 79.0
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 1.2e-48 197.2 119 79.0
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 1.6e-48 196.8 119 82.4
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 1.6e-48 196.8 119 80.7
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 2.1e-48 196.4 119 81.5
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 2.7e-48 196.1 119 79.8
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 2.7e-48 196.1 122 77.9
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 2.7e-48 196.1 119 81.5
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 3.5e-48 195.7 119 79.8
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 6.0e-48 194.9 119 80.7
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 6.0e-48 194.9 165 63.0
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 7.9e-48 194.5 165 63.0
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 1.3e-47 193.7 118 78.0
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 1.3e-47 193.7 119 77.3
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 3.0e-47 192.6 122 74.6
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 3.0e-47 192.6 119 76.5
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 3.9e-47 192.2 119 79.8
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 3.9e-47 192.2 119 79.0
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 3.9e-47 192.2 119 79.0
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 3.9e-47 192.2 119 79.8
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 5.1e-47 191.8 119 79.8
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 8.7e-47 191.0 122 77.0
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 1.1e-46 190.7 119 78.2
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 1.1e-46 190.7 119 77.3
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 1.1e-46 190.7 110 84.5
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 1.1e-46 190.7 122 73.8
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 1.5e-46 190.3 138 69.6
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 1.5e-46 190.3 119 79.0
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 1.9e-46 189.9 119 77.3
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 2.5e-46 189.5 119 77.3
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 2.5e-46 189.5 121 77.7
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 2.5e-46 189.5 110 82.7
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 3.3e-46 189.1 119 79.0
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 4.3e-46 188.7 119 73.1
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 4.3e-46 188.7 119 77.3
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 4.3e-46 188.7 119 77.3
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 4.3e-46 188.7 122 73.8
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 5.6e-46 188.3 122 76.2
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 7.3e-46 188.0 119 78.2
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 1.3e-45 187.2 121 76.9
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 1.6e-45 186.8 121 77.7
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 2.8e-45 186.0 119 73.1
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 3.6e-45 185.7 122 72.1
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 3.1e-44 182.6 119 71.4
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 6.9e-44 181.4 119 72.3
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 6.9e-44 181.4 119 73.1
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 1.2e-43 180.6 119 76.5
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 1.2e-43 180.6 119 73.1
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 1.5e-43 180.3 119 73.1
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 2.0e-43 179.9 119 75.6
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 7.6e-43 177.9 164 56.1
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 1.3e-42 177.2 119 74.8
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 2.9e-42 176.0 119 73.9
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 8.4e-42 174.5 119 69.7
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 1.4e-41 173.7 119 69.7
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 1.4e-41 173.7 147 60.5
CDE02G3888 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 5.5e-41 171.8 147 60.5
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 5.5e-41 171.8 119 70.6
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 1.8e-39 166.8 119 67.2
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 1.8e-39 166.8 120 67.5
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 5.6e-38 161.8 110 68.2
SEGI_02361 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.4e-38 161.4 171 53.8
SGA_v2.0_scaffold1489G53965 Striga asiatica HOM05D003580 ORTHO05D004441 3.7e-37 159.1 110 67.3
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 1.4e-36 157.1 123 68.3
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 9.0e-36 154.5 120 66.7
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 1.2e-35 154.1 120 65.0
QL11p053868 Quercus lobata HOM05D034895 ORTHO05D026091 2.6e-35 152.9 84 89.3
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 1.0e-34 151.0 120 64.2
BcaB04g17891 Brassica carinata HOM05D003580 ORTHO05D004441 9.3e-33 144.4 99 71.7
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 2.3e-31 139.8 174 47.7
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 5.3e-28 128.6 122 59.0
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 2.2e-26 123.2 65 87.7
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 3.8e-26 122.5 59 91.5
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 3.8e-26 122.5 59 93.2
BcaNung02234 Brassica carinata HOM05D003580 ORTHO05D004441 3.7e-21 105.9 119 51.3
arahy.Tifrunner.gnm1.ann1.0G6L2R Arachis hypogaea HOM05D003580 ORTHO05D004441 1.1e-20 104.4 52 88.5
arahy.Tifrunner.gnm1.ann1.G7UC7Z Arachis hypogaea HOM05D003580 ORTHO05D004441 1.1e-20 104.4 52 88.5
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 1.4e-20 104.0 123 49.6
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 9.0e-20 101.3 106 51.9
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.4e-17 94.0 60 75.0
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 2.1e-16 90.1 120 41.7
Medtr1g492720 Medicago truncatula HOM05D003580 ORTHO05D004441 1.8e-12 77.0 61 67.2
CBR_g38824 Chara braunii HOM05D003580 ORTHO05D000002 9.1e-12 74.7 100 44.0
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 7.7e-11 71.6 107 38.3
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 8.5e-10 68.2 64 54.7
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.9e-09 67.0 60 55.0
Pp3c22_14630 Physcomitrium patens HOM05D003580 ORTHO05D004441 2.1e-08 63.5 108 42.6


User provided reference genes

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