Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p050319 Quercus lobata HOM05D005279 ORTHO05D006757 6.6e-190 667.2 325 100.0
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 3.0e-49 199.9 117 85.5
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 1.4e-43 181.0 139 71.2
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 2.1e-42 177.2 159 64.2
MD04G1241700 Malus domestica HOM05D005279 ORTHO05D006757 2.7e-42 176.8 161 61.5
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 1.8e-41 174.1 131 67.9
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 2.3e-41 173.7 141 65.2
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 5.1e-41 172.6 156 57.1
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 1.5e-40 171.0 147 60.5
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 2.8e-39 166.8 172 56.4
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.1e-38 164.9 140 62.9
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 2.4e-38 163.7 122 72.1
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 3.1e-38 163.3 159 56.0
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 3.1e-38 163.3 129 66.7
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 5.3e-38 162.5 149 61.1
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 6.9e-38 162.2 153 58.2
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 9.0e-38 161.8 136 62.5
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 9.0e-38 161.8 136 62.5
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 2.0e-37 160.6 144 63.2
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 2.6e-37 160.2 151 54.3
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 2.6e-37 160.2 150 58.0
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 5.9e-37 159.1 138 60.9
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 7.6e-37 158.7 120 67.5
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 1.3e-36 157.9 158 55.7
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 3.8e-36 156.4 145 54.5
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 3.8e-36 156.4 224 44.6
Lju5221A0T19 Lonicera japonica HOM05D005279 ORTHO05D006757 6.5e-36 155.6 145 54.5
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 1.1e-35 154.8 158 54.4
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 1.1e-35 154.8 125 67.2
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 2.5e-35 153.7 162 53.1
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 1.2e-34 151.4 99 75.8
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 1.6e-34 151.0 225 44.4
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 1.6e-34 151.0 157 54.8
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 1.6e-34 151.0 120 64.2
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 1.6e-34 151.0 124 62.9
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 2.1e-34 150.6 122 63.9
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 2.1e-34 150.6 125 64.8
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 2.7e-34 150.2 134 59.0
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 2.7e-34 150.2 121 62.8
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 4.6e-34 149.4 125 64.8
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 1.0e-33 148.3 122 61.5
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 1.0e-33 148.3 122 63.1
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 1.8e-33 147.5 120 61.7
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 5.1e-33 146.0 120 65.8
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 8.7e-33 145.2 119 62.2
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 1.1e-32 144.8 122 62.3
Haze_04527 Corylus avellana HOM05D005279 ORTHO05D006757 1.5e-32 144.4 97 74.2
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 3.3e-32 143.3 116 64.7
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 4.3e-32 142.9 141 55.3
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 5.7e-32 142.5 117 62.4
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 7.4e-32 142.1 143 53.1
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.3e-31 141.4 124 61.3
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 4.8e-31 139.4 130 58.5
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 8.2e-31 138.7 124 58.1
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 1.1e-30 138.3 135 56.3
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 5.3e-30 136.0 124 56.5
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 5.3e-30 136.0 124 56.5
PGSC0003DMG401016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.2e-29 134.8 124 55.6
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 1.5e-29 134.4 132 59.8
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 7.7e-29 132.1 129 60.5
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 1.0e-28 131.7 129 60.5
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 1.0e-28 131.7 126 54.8
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 1.3e-28 131.3 175 53.7
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 1.3e-28 131.3 139 52.5
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 1.3e-28 131.3 139 52.5
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 2.2e-28 130.6 119 58.8
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 2.2e-28 130.6 120 59.2
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 2.9e-28 130.2 119 57.1
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 8.5e-28 128.6 140 52.9
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 1.1e-27 128.3 132 58.3
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 1.9e-27 127.5 132 53.8
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 3.2e-27 126.7 176 47.2
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 4.2e-27 126.3 113 61.9
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 4.2e-27 126.3 134 56.0
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 4.2e-27 126.3 161 48.4
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 4.2e-27 126.3 130 56.9
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 4.6e-26 122.9 116 56.9
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 6.1e-26 122.5 122 55.7
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 7.9e-26 122.1 145 49.7
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 1.4e-25 121.3 118 55.9
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 1.8e-25 120.9 144 48.6
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 3.0e-25 120.2 149 49.7
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 3.9e-25 119.8 98 64.3
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 5.1e-25 119.4 119 56.3
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 5.1e-25 119.4 122 52.5
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 1.5e-24 117.9 245 38.4
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 9.7e-24 115.2 113 55.8
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 9.7e-24 115.2 126 54.8
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 9.7e-24 115.2 126 54.8
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 9.7e-24 115.2 99 56.6
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 1.3e-23 114.8 168 45.8
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 1.7e-23 114.4 168 45.2
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 1.7e-23 114.4 168 45.2
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 3.7e-23 113.2 118 50.8
CSS0049023 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 4.1e-22 109.8 134 49.3
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 6.9e-22 109.0 117 52.1
SEGI_28852 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 1.7e-20 104.4 111 50.5
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 2.2e-20 104.0 100 58.0
Oeu010148.1 Olea europaea HOM05D005279 ORTHO05D006757 8.5e-20 102.1 138 46.4
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 3.2e-19 100.1 55 87.3
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 1.6e-18 97.8 91 53.8
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 3.6e-18 96.7 57 82.5
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 3.9e-17 93.2 136 39.0
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 4.4e-16 89.7 117 47.0
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 1.3e-15 88.2 56 76.8
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.2e-15 87.4 125 41.6
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 1.8e-14 84.3 100 49.0
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 3.1e-14 83.6 140 40.7
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 5.3e-14 82.8 122 44.3
HPP92_025241 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.3e-12 78.2 74 51.4
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 2.2e-12 77.4 96 45.8
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.0e-12 76.3 70 55.7
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 8.5e-12 75.5 99 44.4
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.6e-10 71.2 90 44.4
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 1.8e-09 67.8 107 36.4


User provided reference genes

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