Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p047330 Quercus lobata HOM05D000095 ORTHO05D010257 5.6e-33 143.7 71 100.0
QL12p034532 Quercus lobata HOM05D000095 ORTHO05D010257 1.4e-20 102.4 56 85.7
CiPaw.07G124600 Carya illinoinensis HOM05D000095 ORTHO05D010257 2.1e-19 98.6 56 82.1
Cfa004895 Carpinus fangiana HOM05D000095 ORTHO05D010257 2.7e-19 98.2 56 80.4
CiPaw.08G083600 Carya illinoinensis HOM05D000095 ORTHO05D010257 1.3e-18 95.9 56 78.6
Haze_05133 Corylus avellana HOM05D000095 ORTHO05D010257 2.3e-18 95.1 56 78.6
COL.COLO4_23143 Corchorus olitorius HOM05D000095 ORTHO05D010257 6.6e-18 93.6 56 76.8
Dinv12088 Davidia involucrata HOM05D000095 ORTHO05D010257 6.6e-18 93.6 56 76.8
Duzib133G0937 Durio zibethinus HOM05D000095 ORTHO05D010257 6.6e-18 93.6 56 76.8
Ciclev10022996m.g Citrus clementina HOM05D000095 ORTHO05D010257 2.5e-17 91.7 56 75.0
Potri.014G113900 Populus trichocarpa HOM05D000095 ORTHO05D010257 2.5e-17 91.7 56 75.0
Prupe.3G003600 Prunus persica HOM05D000095 ORTHO05D010257 3.3e-17 91.3 56 75.0
TWI14G1365 Tripterygium wilfordii HOM05D000095 ORTHO05D010257 3.3e-17 91.3 56 75.0
TWI23G0214 Tripterygium wilfordii HOM05D000095 ORTHO05D010257 3.3e-17 91.3 56 73.2
FAN26G0022 Fragaria x ananassa HOM05D000095 ORTHO05D010257 5.6e-17 90.5 56 75.0
RcHm_v2.0_Chr3g0486111 Rosa chinensis HOM05D000095 ORTHO05D010257 7.3e-17 90.1 56 75.0
Thecc.01G324000 Theobroma cacao HOM05D000095 ORTHO05D010257 9.5e-17 89.7 78 56.4
FvH4_1g26340 Fragaria vesca HOM05D000095 ORTHO05D010257 1.6e-16 89.0 56 73.2
FAN19G1585 Fragaria x ananassa HOM05D000095 ORTHO05D010257 1.6e-16 89.0 56 73.2
FAN28G0815 Fragaria x ananassa HOM05D000095 ORTHO05D010257 1.6e-16 89.0 56 73.2
Potri.002G188100 Populus trichocarpa HOM05D000095 ORTHO05D010257 1.6e-16 89.0 56 73.2
MD17G1283900 Malus domestica HOM05D000095 ORTHO05D010257 2.1e-16 88.6 53 75.5
Manes.01G234000 Manihot esculenta HOM05D000095 ORTHO05D010257 2.1e-16 88.6 56 71.4
Sabra02G0130200 Salix brachista HOM05D000095 ORTHO05D010257 2.1e-16 88.6 56 71.4
Gohir.A08G121300 Gossypium hirsutum HOM05D000095 ORTHO05D010257 2.8e-16 88.2 73 58.9
Duzib138G0855 Durio zibethinus HOM05D000095 ORTHO05D010257 3.6e-16 87.8 56 71.4
Gohir.A11G104000 Gossypium hirsutum HOM05D000095 ORTHO05D010257 6.2e-16 87.0 56 71.4
Cpa.g.sc41.89 Carica papaya HOM05D000095 ORTHO05D010257 1.1e-15 86.3 56 67.9
Gohir.D11G108801 Gossypium hirsutum HOM05D000095 ORTHO05D010257 1.4e-15 85.9 56 69.6
Gorai.007G116400 Gossypium raimondii HOM05D000095 ORTHO05D010257 1.4e-15 85.9 56 69.6
Sabra14G0084000 Salix brachista HOM05D000095 ORTHO05D010257 1.4e-15 85.9 56 71.4
VMungo0720G1149 Vigna mungo HOM05D000095 ORTHO05D010257 5.2e-15 84.0 64 60.9
Glyma.19G220800 Glycine max HOM05D000095 ORTHO05D010257 1.2e-14 82.8 56 67.9
MD09G1288900 Malus domestica HOM05D000095 ORTHO05D010257 1.2e-14 82.8 53 67.9
MD09G1292300 Malus domestica HOM05D000095 ORTHO05D010257 1.2e-14 82.8 53 67.9
TPR.G3091 Trifolium pratense HOM05D000095 ORTHO05D010257 2.0e-14 82.0 55 67.3
TAR633G1466 Trochodendron aralioides HOM05D000095 ORTHO05D010257 2.0e-14 82.0 56 69.6
Ca_10244_v3 Cicer arietinum L. HOM05D000095 ORTHO05D010257 2.6e-14 81.6 56 66.1
Phvul.001G217600 Phaseolus vulgaris HOM05D000095 ORTHO05D010257 4.4e-14 80.9 56 66.1
GSVIVG01028262001 Vitis vinifera HOM05D000095 ORTHO05D010257 4.4e-14 80.9 56 69.6
TAR362G1292 Trochodendron aralioides HOM05D000095 ORTHO05D010257 7.5e-14 80.1 64 59.4
Glyma.02G008200 Glycine max HOM05D000095 ORTHO05D010257 1.3e-13 79.3 64 59.4
VMungo1383G2455 Vigna mungo HOM05D000095 ORTHO05D010257 1.3e-13 79.3 56 64.3
Glyma.03G223600 Glycine max HOM05D000095 ORTHO05D010257 1.7e-13 79.0 56 66.1
Glyma.10G137200 Glycine max HOM05D000095 ORTHO05D010257 1.7e-13 79.0 67 58.2
Medtr1g086180 Medicago truncatula HOM05D000095 ORTHO05D010257 1.7e-13 79.0 56 66.1
Phvul.007G210000 Phaseolus vulgaris HOM05D000095 ORTHO05D010257 2.2e-13 78.6 56 64.3
Psat6g159120 Pisum sativum HOM05D000095 ORTHO05D010257 2.9e-13 78.2 55 63.6
Eucgr.A01014 Eucalyptus grandis HOM05D000095 ORTHO05D010257 3.7e-13 77.8 56 66.1
Atru.chr5.880 Acer truncatum HOM05D000095 ORTHO05D010257 1.4e-12 75.9 53 67.9
Lalb_Chr02g0147091 Lupinus albus HOM05D000095 ORTHO05D010257 1.9e-12 75.5 65 56.9
TAR636G1372 Trochodendron aralioides HOM05D000095 ORTHO05D010257 2.4e-12 75.1 56 66.1
Dinv33164 Davidia involucrata HOM05D000095 ORTHO05D010257 7.1e-12 73.6 58 62.1
Cpa.g.sc57.4 Carica papaya HOM05D000095 ORTHO05D010257 9.2e-12 73.2 56 58.9
Nn4g22005 Nelumbo nucifera HOM05D000095 ORTHO05D010257 1.2e-11 72.8 64 57.8
Nn4g25374 Nelumbo nucifera HOM05D000095 ORTHO05D010257 1.2e-11 72.8 64 57.8
PGR042G3968 Punica granatum HOM05D000095 ORTHO05D010257 2.1e-11 72.0 50 62.0
Lj5g0023851 Lotus japonicus HOM05D000095 ORTHO05D010257 2.7e-11 71.6 56 58.9
Nn3g21921 Nelumbo nucifera HOM05D000095 ORTHO05D010257 1.7e-10 68.9 62 58.1
Medtr7g110580 Medicago truncatula HOM05D000095 ORTHO05D010257 2.3e-10 68.6 48 64.6
MBI19_g30277_MAGBIO Magnolia biondii HOM05D000095 ORTHO05D010257 8.6e-10 66.6 56 53.6
CANSAT25G0880 Cannabis sativa HOM05D000095 ORTHO05D010257 1.1e-09 66.2 54 59.3
TPR.G2458 Trifolium pratense HOM05D000095 ORTHO05D010257 1.5e-09 65.9 55 54.5
Aqoxy2G02511 Aquilegia oxysepala HOM05D000095 ORTHO05D010257 7.3e-09 63.5 64 46.9
PSO761G0246 Papaver somniferum HOM05D000095 ORTHO05D010257 6.2e-08 60.5 58 53.4
PSO210G7029 Papaver somniferum HOM05D000095 ORTHO05D010257 8.1e-08 60.1 58 51.7
DCAR_012304 Daucus carota HOM05D000095 ORTHO05D010257 2.4e-07 58.5 44 61.4
ATR0796G172 Amborella trichopoda HOM05D000095 ORTHO05D000534 2.6e-06 55.1 54 51.9


User provided reference genes

Program Settings