Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p045598 Quercus lobata HOM05D005982 ORTHO05D007891 2.2e-54 215.3 106 100.0
THA.LOC104821984 Tarenaya hassleriana HOM05D005982 ORTHO05D007891 8.3e-49 196.8 99 96.0
CiPaw.07G078800 Carya illinoinensis HOM05D005982 ORTHO05D007891 1.1e-48 196.4 99 96.0
Cfa006274 Carpinus fangiana HOM05D005982 ORTHO05D007891 5.4e-48 194.1 99 93.9
CAN.G217.3 Capsicum annuum HOM05D005982 ORTHO05D007891 7.0e-48 193.7 99 92.9
Oeu062057.1 Olea europaea HOM05D005982 ORTHO05D007891 7.0e-48 193.7 99 92.9
CSS0009322 Camellia sinensis var. sinensis HOM05D005982 ORTHO05D007891 9.1e-48 193.4 97 95.9
ATR0824G061 Amborella trichopoda HOM05D005982 ORTHO05D007891 2.0e-47 192.2 99 89.9
Migut.F01882 Erythranthe guttata HOM05D005982 ORTHO05D007891 2.0e-47 192.2 99 91.9
Solyc04g056650.4 Solanum lycopersicum HOM05D005982 ORTHO05D007891 2.0e-47 192.2 99 91.9
Sopen04g025570 Solanum pennellii HOM05D005982 ORTHO05D007891 2.0e-47 192.2 99 91.9
Zm00001eb306900 Zea mays HOM05D005982 ORTHO05D007891 2.0e-47 192.2 99 92.9
Dinv04347 Davidia involucrata HOM05D005982 ORTHO05D007891 2.7e-47 191.8 99 92.9
SalBow6G2130 Salvia bowleyana HOM05D005982 ORTHO05D007891 2.7e-47 191.8 99 92.9
TAR362G0600 Trochodendron aralioides HOM05D005982 ORTHO05D007891 2.7e-47 191.8 99 91.9
MSTRG.321 Avicennia marina HOM05D005982 ORTHO05D007891 4.5e-47 191.0 99 91.9
Peaxi162Scf00976g00029 Petunia axillaris HOM05D005982 ORTHO05D007891 7.7e-47 190.3 99 91.9
MELO3C010074.2 Cucumis melo HOM05D005982 ORTHO05D007891 1.0e-46 189.9 99 91.9
ECA240G3075 Erigeron canadensis HOM05D005982 ORTHO05D007891 1.0e-46 189.9 99 90.9
Nn4g26684 Nelumbo nucifera HOM05D005982 ORTHO05D007891 1.0e-46 189.9 99 90.9
Sp7g05710 Schrenkiella parvula HOM05D005982 ORTHO05D007891 1.0e-46 189.9 99 90.9
CANSAT54G1987 Cannabis sativa HOM05D005982 ORTHO05D007891 1.3e-46 189.5 99 88.9
MD04G1243700 Malus domestica HOM05D005982 ORTHO05D007891 1.3e-46 189.5 99 90.9
Glyma.09G251900 Glycine max HOM05D005982 ORTHO05D007891 1.7e-46 189.1 99 88.9
Manes.08G104700 Manihot esculenta HOM05D005982 ORTHO05D007891 1.7e-46 189.1 99 90.9
AL2G22080 Arabidopsis lyrata HOM05D005982 ORTHO05D007891 2.2e-46 188.7 99 89.9
AT1G65410 Arabidopsis thaliana HOM05D005982 ORTHO05D007891 2.2e-46 188.7 99 89.9
Duzib128G1048 Durio zibethinus HOM05D005982 ORTHO05D007891 2.2e-46 188.7 99 91.9
Glyma.18G240700 Glycine max HOM05D005982 ORTHO05D007891 2.2e-46 188.7 99 87.9
HanXRQChr13g0409591 Helianthus annuus HOM05D005982 ORTHO05D007891 2.2e-46 188.7 99 89.9
Medtr7g079540 Medicago truncatula HOM05D005982 ORTHO05D007891 2.9e-46 188.3 99 87.9
HanXRQChr03g0078051 Helianthus annuus HOM05D005982 ORTHO05D007891 3.8e-46 188.0 99 89.9
Ciclev10012081m.g Citrus clementina HOM05D005982 ORTHO05D007891 5.0e-46 187.6 99 88.9
Peaxi162Scf00006g04218 Petunia axillaris HOM05D005982 ORTHO05D007891 5.0e-46 187.6 99 90.9
MD12G1259300 Malus domestica HOM05D005982 ORTHO05D007891 6.5e-46 187.2 99 88.9
Os03g0670100 Oryza sativa ssp. japonica HOM05D005982 ORTHO05D007891 6.5e-46 187.2 99 89.9
BcaB05g24111 Brassica carinata HOM05D005982 ORTHO05D007891 8.5e-46 186.8 100 90.0
Carub.0002s1112 Capsella rubella HOM05D005982 ORTHO05D007891 8.5e-46 186.8 99 88.9
CARHR057060 Cardamine hirsuta HOM05D005982 ORTHO05D007891 8.5e-46 186.8 99 88.9
Gohir.A08G224566 Gossypium hirsutum HOM05D005982 ORTHO05D007891 8.5e-46 186.8 99 91.9
Lsat_1_v5_gn_3_109720 Lactuca sativa HOM05D005982 ORTHO05D007891 8.5e-46 186.8 98 90.8
PGR031G2177 Punica granatum HOM05D005982 ORTHO05D007891 8.5e-46 186.8 100 91.0
CDE09G1326 Ceratophyllum demersum HOM05D005982 ORTHO05D007891 1.1e-45 186.4 105 83.8
Sp5g20140 Schrenkiella parvula HOM05D005982 ORTHO05D007891 1.1e-45 186.4 99 88.9
vmacro00703 Vaccinium macrocarpon HOM05D005982 ORTHO05D007891 1.1e-45 186.4 99 89.9
arahy.Tifrunner.gnm1.ann1.9114DU Arachis hypogaea HOM05D005982 ORTHO05D007891 1.5e-45 186.0 99 85.9
arahy.Tifrunner.gnm1.ann1.9D9UM2 Arachis hypogaea HOM05D005982 ORTHO05D007891 1.5e-45 186.0 99 85.9
Ca_07966_v3 Cicer arietinum L. HOM05D005982 ORTHO05D007891 1.5e-45 186.0 99 86.9
BcaC03g14702 Brassica carinata HOM05D005982 ORTHO05D007891 1.9e-45 185.7 100 89.0
A02p13190 Brassica napus HOM05D005982 ORTHO05D007891 1.9e-45 185.7 100 89.0
C02p21350 Brassica napus HOM05D005982 ORTHO05D007891 1.9e-45 185.7 100 89.0
BolC2t08274H Brassica oleracea HOM05D005982 ORTHO05D007891 1.9e-45 185.7 100 89.0
BraA02t06375Z Brassica rapa HOM05D005982 ORTHO05D007891 1.9e-45 185.7 100 89.0
Sed0000119 Sechium edule HOM05D005982 ORTHO05D007891 2.5e-45 185.3 99 88.9
Thhalv10018868m.g Eutrema salsugineum HOM05D005982 ORTHO05D007891 3.2e-45 184.9 99 88.9
Cc09_g03440 Coffea canephora HOM05D005982 ORTHO05D007891 4.2e-45 184.5 99 88.9
Prupe.6G359900 Prunus persica HOM05D005982 ORTHO05D007891 4.2e-45 184.5 99 88.9
VMungo1383G2145 Vigna mungo HOM05D005982 ORTHO05D007891 4.2e-45 184.5 99 85.9
Aqoxy2G03151 Aquilegia oxysepala HOM05D005982 ORTHO05D007891 5.5e-45 184.1 99 89.9
ClCG03G010900 Citrullus lanatus HOM05D005982 ORTHO05D007891 5.5e-45 184.1 97 90.7
PSO017G3475 Papaver somniferum HOM05D005982 ORTHO05D007891 7.2e-45 183.7 99 85.9
PSO675G2550 Papaver somniferum HOM05D005982 ORTHO05D007891 7.2e-45 183.7 99 85.9
Gohir.D08G244900 Gossypium hirsutum HOM05D005982 ORTHO05D007891 1.2e-44 183.0 99 89.9
Gorai.004G261400 Gossypium raimondii HOM05D005982 ORTHO05D007891 1.2e-44 183.0 99 89.9
Hund07330 Selenicereus undatus HOM05D005982 ORTHO05D007891 2.1e-44 182.2 99 85.9
GSVIVG01019131001 Vitis vinifera HOM05D005982 ORTHO05D007891 2.1e-44 182.2 99 88.9
Lalb_Chr03g0038371 Lupinus albus HOM05D005982 ORTHO05D007891 2.8e-44 181.8 99 86.9
TWI75G0896 Tripterygium wilfordii HOM05D005982 ORTHO05D007891 3.6e-44 181.4 99 90.9
CDE02G2764 Ceratophyllum demersum HOM05D005982 ORTHO05D007891 4.7e-44 181.0 105 81.9
Lalb_Chr19g0126741 Lupinus albus HOM05D005982 ORTHO05D007891 4.7e-44 181.0 99 84.8
Phvul.008G055500 Phaseolus vulgaris HOM05D005982 ORTHO05D007891 4.7e-44 181.0 99 84.8
Potri.002G212701 Populus trichocarpa HOM05D005982 ORTHO05D007891 6.1e-44 180.6 99 90.9
MSTRG.8220 Avicennia marina HOM05D005982 ORTHO05D007891 1.4e-43 179.5 99 87.9
FAN05G0974 Fragaria x ananassa HOM05D005982 ORTHO05D007891 1.4e-43 179.5 99 86.9
HPP92_020752 Vanilla planifolia HOM05D005982 ORTHO05D007891 1.4e-43 179.5 99 86.9
Manes.09G184400 Manihot esculenta HOM05D005982 ORTHO05D007891 2.3e-43 178.7 102 88.2
EL10Ac4g09983 Beta vulgaris HOM05D005982 ORTHO05D007891 4.0e-43 177.9 99 80.8
AUR62000331 Chenopodium quinoa HOM05D005982 ORTHO05D007891 6.8e-43 177.2 99 81.8
AUR62006673 Chenopodium quinoa HOM05D005982 ORTHO05D007891 6.8e-43 177.2 99 81.8
FvH4_6g00670 Fragaria vesca HOM05D005982 ORTHO05D007891 6.8e-43 177.2 99 85.9
FAN14G5963 Fragaria x ananassa HOM05D005982 ORTHO05D007891 6.8e-43 177.2 99 85.9
Potri.014G137000 Populus trichocarpa HOM05D005982 ORTHO05D007891 2.0e-42 175.6 99 87.9
RcHm_v2.0_Chr3g0448111 Rosa chinensis HOM05D005982 ORTHO05D007891 4.4e-42 174.5 99 85.9
AagrBONN_evm.TU.Sc2ySwM_117.2486 Anthoceros agrestis HOM05D005982 ORTHO05D007891 7.5e-42 173.7 99 82.8
Atru.chr12.2111 Acer truncatum HOM05D005982 ORTHO05D007891 9.8e-42 173.3 87 94.3
FAN09G4525 Fragaria x ananassa HOM05D005982 ORTHO05D007891 9.8e-42 173.3 99 83.8
Aa31LG2G2440 Aethionema arabicum HOM05D005982 ORTHO05D007891 1.1e-40 169.9 90 91.1
Pp3c20_17770 Physcomitrium patens HOM05D005982 ORTHO05D007891 1.4e-40 169.5 99 80.8
Cpa.g.sc123.7 Carica papaya HOM05D005982 ORTHO05D007891 1.8e-40 169.1 87 93.1
Hma1.2p1_0171F.1_g075780 Hydrangea macrophylla HOM05D005982 ORTHO05D007891 3.1e-40 168.3 87 90.8
Mapoly0149s0025 Marchantia polymorpha HOM05D005982 ORTHO05D007891 3.1e-40 168.3 99 78.8
SMO119G0460 Selaginella moellendorffii HOM05D005982 ORTHO05D007891 5.4e-40 167.5 99 77.8
Haze_04537 Corylus avellana HOM05D005982 ORTHO05D007891 1.2e-39 166.4 89 89.9
CsaV3_1G044650 Cucumis sativus L. HOM05D005982 ORTHO05D007891 1.6e-39 166.0 87 92.0
Rhsim09G0010600 Rhododendron simsii HOM05D005982 ORTHO05D007891 1.6e-39 166.0 87 90.8
DCAR_001501 Daucus carota HOM05D005982 ORTHO05D007891 2.0e-39 165.6 87 89.7
Eucgr.B01388 Eucalyptus grandis HOM05D005982 ORTHO05D007891 2.0e-39 165.6 87 89.7
Lj7A713G54 Lonicera japonica HOM05D005982 ORTHO05D007891 2.0e-39 165.6 88 90.9
Psat3g104760 Pisum sativum HOM05D005982 ORTHO05D007891 2.0e-39 165.6 92 87.0
Pp3c24_4350 Physcomitrium patens HOM05D005982 ORTHO05D007891 3.5e-39 164.9 99 79.8
Nitab4.5_0000946g0030 Nicotiana tabacum HOM05D005982 ORTHO05D007891 5.9e-39 164.1 89 88.8
COL.COLO4_27407 Corchorus olitorius HOM05D005982 ORTHO05D007891 7.8e-39 163.7 87 92.0
TPR.G28447 Trifolium pratense HOM05D005982 ORTHO05D007891 1.3e-38 162.9 92 84.8
CBR_g23946 Chara braunii HOM05D005982 ORTHO05D007891 2.3e-38 162.2 99 74.7
Sabra14G0103400 Salix brachista HOM05D005982 ORTHO05D007891 2.9e-38 161.8 92 85.9
Lj1g0016626 Lotus japonicus HOM05D005982 ORTHO05D007891 2.1e-36 155.6 100 79.0
Cre16.g658526 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D007891 2.6e-34 148.7 101 66.3
AUR62000328 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.7e-34 147.5 87 77.0
SHI13732 Sapria himalayana HOM05D005982 ORTHO05D007891 5.7e-34 147.5 87 83.9
MCO07G748 Micromonas commoda HOM05D005982 ORTHO05D007891 2.4e-32 142.1 102 65.7
PRCOL_00001103 Prasinoderma coloniale HOM05D005982 ORTHO05D007891 3.1e-27 125.2 99 59.6
SGA_v2.0_scaffold340G49298 Striga asiatica HOM05D005982 ORTHO05D007891 2.9e-25 118.6 59 98.3
unitig_62.g23780 Utricularia gibba HOM05D005982 ORTHO05D007891 2.9e-25 118.6 59 98.3
Sc09g0001550 Simmondsia chinensis HOM05D005982 ORTHO05D007891 8.3e-25 117.1 61 95.1
SGA_v2.0_scaffold105G30407 Striga asiatica HOM05D005982 ORTHO05D007891 1.4e-24 116.3 59 96.6
Actinidia27111 Actinidia chinensis HOM05D005982 ORTHO05D007891 1.6e-23 112.8 59 91.5
Gohir.D04G026600 Gossypium hirsutum HOM05D005982 ORTHO05D007891 6.2e-12 74.3 42 85.7
BcaB07g33676 Brassica carinata HOM05D005982 ORTHO05D007891 1.4e-08 63.2 37 86.5
Thecc.05G201800 Theobroma cacao HOM05D005982 ORTHO05D007891 1.2e-07 60.1 30 96.7
AagrBONN_evm.TU.Sc2ySwM_368.1296 Anthoceros agrestis HOM05D000068 ORTHO05D007185 3.0e-06 55.5 91 37.4


User provided reference genes

Program Settings