Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 2.3e-72 275.4 133 100.0
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 5.0e-35 151.4 139 59.7
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 1.4e-29 133.3 127 59.8
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 6.5e-27 124.4 131 53.4
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 5.5e-26 121.3 125 54.4
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 7.2e-26 120.9 121 52.1
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 1.2e-25 120.2 120 52.5
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 5.2e-24 114.8 134 51.5
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 2.0e-23 112.8 130 48.5
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 2.0e-23 112.8 125 49.6
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 1.7e-22 109.8 133 45.9
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.2e-22 109.4 131 49.6
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 2.2e-22 109.4 135 46.7
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 1.4e-21 106.7 125 51.2
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 2.4e-21 105.9 139 48.9
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 1.0e-19 100.5 140 47.1
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 1.7e-19 99.8 127 44.1
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 8.6e-19 97.4 132 43.9
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 5.5e-18 94.7 132 43.9
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 1.2e-17 93.6 114 48.2
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 2.1e-17 92.8 135 44.4
TAR371G0248 Trochodendron aralioides HOM05D007842 ORTHO05D009661 3.6e-17 92.0 123 45.5
TAR629G0634 Trochodendron aralioides HOM05D000414 ORTHO05D000276 3.6e-17 92.0 133 43.6
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 4.7e-17 91.7 133 42.9
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 4.7e-17 91.7 135 43.0
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 6.1e-17 91.3 141 41.1
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 1.4e-16 90.1 117 45.3
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.8e-16 89.7 125 40.8
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 1.8e-16 89.7 125 40.8
Haze_14444 Corylus avellana HOM05D007842 ORTHO05D009661 3.0e-16 89.0 94 54.3
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 4.0e-16 88.6 132 40.2
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 5.2e-16 88.2 116 44.0
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 6.8e-16 87.8 139 41.0
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 8.9e-16 87.4 132 43.9
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 8.9e-16 87.4 132 43.9
Prupe.1G307400 Prunus persica HOM05D007842 ORTHO05D009661 1.2e-15 87.0 131 45.8
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 2.0e-15 86.3 127 44.1
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 3.4e-15 85.5 113 42.5
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 3.4e-15 85.5 121 42.1
Atru.chr11.1326 Acer truncatum HOM05D007842 ORTHO05D009661 4.4e-15 85.1 87 50.6
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 4.4e-15 85.1 118 44.1
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 5.7e-15 84.7 136 42.6
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 3.7e-14 82.0 126 42.1
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 6.3e-14 81.3 97 48.5
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 1.4e-13 80.1 137 40.1
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.8e-13 79.7 137 41.6
arahy.Tifrunner.gnm1.ann1.3ZRF2C Arachis hypogaea HOM05D007842 ORTHO05D009661 4.1e-13 78.6 138 39.9
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 5.4e-13 78.2 116 44.0
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 9.2e-13 77.4 121 42.1
Actinidia13668 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.0e-12 76.3 147 36.1
ECA246G3435 Erigeron canadensis HOM05D007842 ORTHO05D009661 4.5e-12 75.1 121 42.1
Lsat_1_v5_gn_4_18840 Lactuca sativa HOM05D007842 ORTHO05D009661 5.9e-12 74.7 119 41.2
Glyma.02G097800 Glycine max HOM05D007842 ORTHO05D009661 2.9e-11 72.4 116 41.4
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 2.9e-11 72.4 114 39.5
Gohir.D13G070950 Gossypium hirsutum HOM05D007842 ORTHO05D009661 8.6e-11 70.9 110 38.2
PGR119G2463 Punica granatum HOM05D007842 ORTHO05D009661 8.6e-11 70.9 120 42.5
Lsat_1_v5_gn_4_18820 Lactuca sativa HOM05D007842 ORTHO05D009661 1.1e-10 70.5 112 39.3
RcHm_v2.0_Chr4g0435601 Rosa chinensis HOM05D022909 ORTHO05D009661 1.1e-10 70.5 117 40.2
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 1.5e-10 70.1 99 40.4
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 1.5e-10 70.1 139 38.1
Lsat_1_v5_gn_4_18760 Lactuca sativa HOM05D007842 ORTHO05D009661 1.9e-10 69.7 110 39.1
Manes.06G070700 Manihot esculenta HOM05D007842 ORTHO05D009661 2.5e-10 69.3 137 38.7
CsaV3_5G034090 Cucumis sativus L. HOM05D030371 ORTHO05D009661 3.3e-10 68.9 113 41.6
Gohir.A13G053568 Gossypium hirsutum HOM05D007842 ORTHO05D009661 3.3e-10 68.9 110 37.3
Sed0016132 Sechium edule HOM05D030371 ORTHO05D009661 3.3e-10 68.9 115 39.1
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 5.6e-10 68.2 119 37.8
Gorai.013G081200 Gossypium raimondii HOM05D007842 ORTHO05D009661 9.5e-10 67.4 110 36.4
Lsat_1_v5_gn_4_18800 Lactuca sativa HOM05D007842 ORTHO05D009661 9.5e-10 67.4 128 36.7
PGR119G1821 Punica granatum HOM05D007842 ORTHO05D009661 1.6e-09 66.6 129 38.8
DCAR_023676 Daucus carota HOM05D007842 ORTHO05D009661 2.8e-09 65.9 114 42.1
Eucgr.G02340 Eucalyptus grandis HOM05D007842 ORTHO05D009661 4.7e-09 65.1 114 37.7
Phvul.003G028900 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 4.7e-09 65.1 117 37.6
Oeu044385.1 Olea europaea HOM05D007842 ORTHO05D009661 6.1e-09 64.7 60 45.0
Lsat_1_v5_gn_3_59880 Lactuca sativa HOM05D007842 ORTHO05D009661 3.1e-08 62.4 110 36.4
arahy.Tifrunner.gnm1.ann1.S09ETB Arachis hypogaea HOM05D007842 ORTHO05D009661 4.0e-08 62.0 155 34.8
ECA234G4760 Erigeron canadensis HOM05D007842 ORTHO05D009661 5.2e-08 61.6 114 36.8
Lalb_Chr17g0342001 Lupinus albus HOM05D007842 ORTHO05D009661 5.2e-08 61.6 96 38.5
FvH4_4g27740 Fragaria vesca HOM05D022909 ORTHO05D009661 7.5e-07 57.8 139 33.8
FAN12G3934 Fragaria x ananassa HOM05D022909 ORTHO05D009661 7.5e-07 57.8 139 33.8
ClCG05G022920 Citrullus lanatus HOM05D030371 ORTHO05D009661 9.8e-07 57.4 94 42.6
Lsat_1_v5_gn_3_59860 Lactuca sativa HOM05D007842 ORTHO05D009661 1.3e-06 57.0 91 40.7
FAN07G2083 Fragaria x ananassa HOM05D022909 ORTHO05D009661 8.3e-06 54.3 139 33.1


User provided reference genes

Program Settings