Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 1.6e-189 666.0 346 100.0
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 1.1e-129 467.2 343 70.6
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 3.1e-129 465.7 311 73.6
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 6.5e-127 458.0 343 68.5
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 3.2e-126 455.7 315 73.3
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 3.2e-126 455.7 346 65.3
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 6.1e-125 451.4 352 66.2
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 6.1e-125 451.4 343 66.8
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 1.0e-124 450.7 355 65.6
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 6.7e-124 448.0 345 68.1
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 1.5e-123 446.8 303 71.0
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 2.6e-123 446.0 332 68.1
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 3.3e-123 445.7 333 67.9
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 4.4e-123 445.3 283 76.0
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 9.7e-123 444.1 257 83.7
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 2.8e-122 442.6 351 64.7
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.4e-121 440.3 330 67.0
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.4e-121 440.3 330 67.0
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 9.1e-121 437.6 330 66.4
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 9.1e-121 437.6 253 82.2
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.5e-120 436.8 330 66.1
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 2.6e-120 436.0 249 82.7
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 1.7e-119 433.3 343 65.6
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 2.2e-119 433.0 344 65.4
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 5.0e-119 431.8 248 81.9
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 5.0e-119 431.8 292 73.3
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 1.4e-118 430.3 253 77.5
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.9e-118 429.9 253 77.9
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 2.5e-118 429.5 387 58.1
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 5.5e-118 428.3 294 69.7
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 7.2e-118 427.9 254 77.6
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 9.4e-118 427.6 343 64.7
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 9.4e-118 427.6 250 82.8
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 2.1e-117 426.4 250 80.8
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 3.6e-117 425.6 253 77.5
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 4.7e-117 425.2 342 64.3
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 8.0e-117 424.5 253 76.3
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 8.0e-117 424.5 249 80.3
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.8e-116 423.3 282 73.4
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 3.9e-116 422.2 342 63.5
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 1.1e-115 420.6 254 76.0
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 1.1e-115 420.6 255 77.3
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 4.4e-115 418.7 226 87.2
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 7.4e-115 417.9 253 76.3
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 2.8e-114 416.0 254 74.8
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 2.8e-114 416.0 253 76.7
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 3.7e-114 415.6 345 62.6
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 4.8e-114 415.2 316 65.8
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 1.1e-113 414.1 254 78.3
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 1.8e-113 413.3 331 63.7
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 3.1e-113 412.5 360 62.5
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 9.1e-113 411.0 252 75.8
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 9.1e-113 411.0 252 75.8
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 9.1e-113 411.0 252 75.8
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.2e-112 410.6 253 75.9
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 2.0e-112 409.8 253 74.3
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 2.6e-112 409.5 253 75.5
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 4.5e-112 408.7 255 73.7
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 7.7e-112 407.9 247 78.5
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 3.8e-111 405.6 254 73.2
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 6.5e-111 404.8 257 74.7
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 6.5e-111 404.8 252 74.6
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 8.5e-111 404.4 254 72.8
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 1.5e-110 403.7 251 76.5
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 4.2e-110 402.1 226 82.7
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 4.2e-110 402.1 279 68.5
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 5.5e-110 401.7 297 69.7
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 2.1e-109 399.8 255 72.5
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 1.0e-108 397.5 253 73.9
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 4.0e-108 395.6 316 64.2
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 4.4e-107 392.1 254 72.8
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 9.7e-107 391.0 365 57.0
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 9.7e-107 391.0 225 81.8
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 2.4e-105 386.3 251 70.5
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 5.3e-105 385.2 250 70.8
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 2.9e-103 379.4 287 63.4
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 1.4e-100 370.5 230 75.7
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 1.2e-99 367.5 252 67.1
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 6.3e-98 361.7 360 51.9
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.9e-95 352.8 290 59.3
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 1.9e-94 350.1 278 62.2
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 5.7e-91 338.6 343 51.9
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 2.3e-87 326.6 253 68.4
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 2.3e-87 326.6 206 75.2
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 8.6e-87 324.7 183 83.6
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 4.3e-86 322.4 183 81.4
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 2.1e-85 320.1 252 62.3
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 8.9e-84 314.7 246 61.0
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 1.7e-82 310.5 198 71.7
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 4.1e-81 305.8 228 64.0
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.6e-80 303.9 190 74.7
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 2.0e-80 303.5 255 58.8
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 6.6e-79 298.5 231 61.5
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 6.6e-79 298.5 231 61.5
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 8.0e-77 291.6 178 78.1
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 4.4e-75 285.8 164 78.7
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 1.1e-73 281.2 246 53.7
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.0e-71 274.6 191 68.1
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 9.5e-70 268.1 169 73.4
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 4.9e-66 255.8 311 47.6
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 4.9e-66 255.8 311 47.6
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.9e-65 253.8 244 48.0
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 2.5e-62 243.4 195 63.6
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 1.3e-58 231.1 182 63.7
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 1.7e-58 230.7 213 51.2
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 2.9e-50 203.4 131 69.5
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 9.3e-49 198.4 131 67.9
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 9.3e-49 198.4 203 54.7
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 7.6e-43 178.7 131 64.1
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 7.6e-35 152.1 244 35.2
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 2.9e-34 150.2 92 78.3
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 2.8e-29 133.7 102 62.7
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 1.6e-24 117.9 245 34.3
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 5.1e-23 112.8 256 31.6
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 1.8e-20 104.4 66 71.2
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 2.2e-18 97.4 258 28.7
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.9e-17 94.4 57 80.7
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 1.1e-09 68.6 122 44.3


User provided reference genes

Program Settings