Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p041880 Quercus lobata HOM05D000051 ORTHO05D000015 2.8e-88 328.6 162 100.0
QL05p074508 Quercus lobata HOM05D000051 ORTHO05D000015 7.1e-68 260.8 139 93.5
QL05p074484 Quercus lobata HOM05D000051 ORTHO05D000015 1.4e-60 236.5 152 79.6
QL05p074494 Quercus lobata HOM05D000051 ORTHO05D000015 1.4e-60 236.5 135 87.4
QL05p074475 Quercus lobata HOM05D000051 ORTHO05D000015 2.7e-59 232.3 150 78.0
QL01p041888 Quercus lobata HOM05D000051 ORTHO05D000015 6.5e-45 184.5 135 71.9
QL01p041819 Quercus lobata HOM05D000051 ORTHO05D000015 1.0e-37 160.6 130 66.2
Cfa006569 Carpinus fangiana HOM05D000051 ORTHO05D000015 3.2e-36 155.6 150 52.7
Cfa000229 Carpinus fangiana HOM05D000051 ORTHO05D000015 2.1e-35 152.9 144 52.8
QL01p041814 Quercus lobata HOM05D000051 ORTHO05D000015 7.9e-35 151.0 141 56.7
Cfa000258 Carpinus fangiana HOM05D000051 ORTHO05D000015 2.3e-34 149.4 169 47.3
Cfa000226 Carpinus fangiana HOM05D000051 ORTHO05D000015 3.0e-34 149.1 147 52.4
Cfa000227 Carpinus fangiana HOM05D000051 ORTHO05D000015 6.7e-34 147.9 141 52.5
QL01p041826 Quercus lobata HOM05D000051 ORTHO05D000015 2.4e-31 139.4 147 51.7
Cfa000225 Carpinus fangiana HOM05D007920 ORTHO05D009993 2.0e-30 136.3 137 53.3
Cfa000228 Carpinus fangiana HOM05D000051 ORTHO05D000015 4.5e-30 135.2 138 52.2
Cfa000255 Carpinus fangiana HOM05D000051 ORTHO05D000015 7.7e-30 134.4 164 45.7
Cfa000256 Carpinus fangiana HOM05D000051 ORTHO05D000015 3.8e-29 132.1 150 48.7
Cfa000257 Carpinus fangiana HOM05D000051 ORTHO05D000015 9.4e-28 127.5 174 45.4
Cfa006563 Carpinus fangiana HOM05D000051 ORTHO05D000015 9.4e-28 127.5 140 50.7
RcHm_v2.0_Chr5g0069781 Rosa chinensis HOM05D000051 ORTHO05D000015 6.1e-27 124.8 142 45.8
RcHm_v2.0_Chr5g0069761 Rosa chinensis HOM05D000051 ORTHO05D000015 1.0e-26 124.0 138 46.4
RcHm_v2.0_Chr5g0069771 Rosa chinensis HOM05D000051 ORTHO05D000015 2.6e-25 119.4 143 44.8
Cfa016050 Carpinus fangiana HOM05D000051 ORTHO05D000015 1.3e-24 117.1 153 45.1
Prupe.4G024600 Prunus persica HOM05D000051 ORTHO05D000015 1.1e-23 114.0 138 42.0
RcHm_v2.0_Chr5g0069821 Rosa chinensis HOM05D000051 ORTHO05D000015 1.8e-23 113.2 140 42.9
QL01p041755 Quercus lobata HOM05D000051 ORTHO05D000015 4.1e-23 112.1 146 45.2
TWI63G1267 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 5.3e-23 111.7 132 48.5
RcHm_v2.0_Chr5g0069791 Rosa chinensis HOM05D000051 ORTHO05D000015 9.1e-23 110.9 142 39.4
TWI38G2283 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 5.9e-22 108.2 135 45.2
TWI38G0777 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 1.3e-21 107.1 156 41.0
TWI38G0050 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 2.9e-21 105.9 165 39.4
QL05p074592 Quercus lobata HOM05D000051 ORTHO05D000015 5.0e-21 105.1 159 37.1
Cfa010713 Carpinus fangiana HOM05D000051 ORTHO05D000015 6.5e-21 104.8 126 48.4
Dinv17822 Davidia involucrata HOM05D000051 ORTHO05D000015 1.9e-20 103.2 138 45.7
Eucgr.E04101 Eucalyptus grandis HOM05D000051 ORTHO05D000015 7.2e-20 101.3 140 40.7
QL01p041788 Quercus lobata HOM05D000051 ORTHO05D000015 7.2e-20 101.3 149 41.6
QL05p074600 Quercus lobata HOM05D000051 ORTHO05D000015 7.2e-20 101.3 152 38.8
QL01p041783 Quercus lobata HOM05D000051 ORTHO05D000015 2.7e-19 99.4 155 38.1
TWI38G2112 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 3.6e-19 99.0 145 41.4
QL01p041777 Quercus lobata HOM05D000051 ORTHO05D000015 4.7e-19 98.6 150 40.0
Cfa007373 Carpinus fangiana HOM05D000051 ORTHO05D000015 8.0e-19 97.8 137 42.3
QL05p074566 Quercus lobata HOM05D000051 ORTHO05D000015 1.8e-18 96.7 155 36.8
Potri.011G024300 Populus trichocarpa HOM05D000051 ORTHO05D000015 2.6e-17 92.8 169 38.5
QL05p074545 Quercus lobata HOM05D000051 ORTHO05D000015 2.6e-17 92.8 144 36.8
COL.COLO4_04295 Corchorus olitorius HOM05D000051 ORTHO05D000015 3.4e-17 92.4 114 43.9
MD10G1316000 Malus domestica HOM05D000051 ORTHO05D000015 9.8e-17 90.9 139 39.6
Duzib160G0642 Durio zibethinus HOM05D000051 ORTHO05D000015 1.3e-16 90.5 150 38.0
arahy.Tifrunner.gnm1.ann1.U3PQ4N Arachis hypogaea HOM05D000051 ORTHO05D000015 1.7e-16 90.1 165 32.7
Eucgr.E04098 Eucalyptus grandis HOM05D000051 ORTHO05D000015 8.3e-16 87.8 145 35.2
Oeu007604.1 Olea europaea HOM05D000051 ORTHO05D000015 1.4e-15 87.0 139 36.0
COL.COLO4_35136 Corchorus olitorius HOM05D000051 ORTHO05D000015 1.8e-15 86.7 113 40.7
COL.COLO4_05307 Corchorus olitorius HOM05D000051 ORTHO05D000015 2.4e-15 86.3 150 35.3
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 2.4e-15 86.3 138 34.8
Lj5g0007798 Lotus japonicus HOM05D000051 ORTHO05D000015 5.4e-15 85.1 152 35.5
arahy.Tifrunner.gnm1.ann1.LZ56CD Arachis hypogaea HOM05D000051 ORTHO05D000015 1.6e-14 83.6 168 33.9
arahy.Tifrunner.gnm1.ann1.T6X0Y4 Arachis hypogaea HOM05D000051 ORTHO05D000015 1.6e-14 83.6 164 34.8
QL05p074559 Quercus lobata HOM05D000051 ORTHO05D000015 2.0e-14 83.2 110 38.2
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 4.5e-14 82.0 134 35.1
PGSC0003DMG401001040 Solanum tuberosum HOM05D000051 ORTHO05D000015 4.5e-14 82.0 134 35.1
COL.COLO4_25166 Corchorus olitorius HOM05D000051 ORTHO05D000015 7.7e-14 81.3 139 35.3
Rhsim04G0001300 Rhododendron simsii HOM05D000051 ORTHO05D000015 1.0e-13 80.9 138 33.3
arahy.Tifrunner.gnm1.ann1.9X7FSY Arachis hypogaea HOM05D000051 ORTHO05D000015 2.2e-13 79.7 144 34.7
Sopen07g032410 Solanum pennellii HOM05D000051 ORTHO05D000015 8.5e-13 77.8 134 32.8
Duzib114G0289 Durio zibethinus HOM05D000051 ORTHO05D000015 1.1e-12 77.4 116 37.1
Potri.011G024200 Populus trichocarpa HOM05D000051 ORTHO05D000015 1.5e-12 77.0 79 50.6
QL05p074536 Quercus lobata HOM05D000051 ORTHO05D000015 1.5e-12 77.0 156 34.6
Medtr4g080590 Medicago truncatula HOM05D000051 ORTHO05D000015 1.9e-12 76.6 147 38.1
Hma1.2p1_1609F.1_g293440 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 2.5e-12 76.3 151 30.5
RcHm_v2.0_Chr5g0069831 Rosa chinensis HOM05D000051 ORTHO05D000015 7.2e-12 74.7 147 36.1
Eucgr.E04094 Eucalyptus grandis HOM05D000051 ORTHO05D000015 1.2e-11 73.9 120 38.3
Eucgr.E04106 Eucalyptus grandis HOM05D000051 ORTHO05D000015 1.6e-11 73.6 139 32.4
Medtr4g080773 Medicago truncatula HOM05D000051 ORTHO05D000015 1.6e-11 73.6 149 33.6
Sabra11G0015200 Salix brachista HOM05D000051 ORTHO05D000015 2.7e-11 72.8 161 34.8
CSS0034448 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 6.1e-11 71.6 110 34.5
CAN.G337.100 Capsicum annuum HOM05D000051 ORTHO05D000015 6.1e-11 71.6 134 33.6
Eucgr.E04100 Eucalyptus grandis HOM05D000051 ORTHO05D000015 1.0e-10 70.9 99 39.4
CSS0010373 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 1.4e-10 70.5 137 32.1
Cc09_g09330 Coffea canephora HOM05D000051 ORTHO05D000015 3.0e-10 69.3 165 30.9
Potri.011G024600 Populus trichocarpa HOM05D000051 ORTHO05D000015 3.0e-10 69.3 116 35.3
QL08p012534 Quercus lobata HOM05D000051 ORTHO05D000015 3.0e-10 69.3 151 30.5
PSO210G0477 Papaver somniferum HOM05D000051 ORTHO05D000015 4.0e-10 68.9 136 33.8
Medtr5g005690 Medicago truncatula HOM05D000051 ORTHO05D000015 6.8e-10 68.2 140 30.0
Medtr4g080787 Medicago truncatula HOM05D000051 ORTHO05D000015 8.8e-10 67.8 151 33.1
vmacro09739 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 8.8e-10 67.8 86 37.2
Migut.M01792 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.2e-09 67.4 138 31.2
AUR62028049 Chenopodium quinoa HOM05D000051 ORTHO05D000015 1.5e-09 67.0 139 35.3
Medtr4g080807 Medicago truncatula HOM05D000051 ORTHO05D000015 1.5e-09 67.0 117 36.8
QL08p012538 Quercus lobata HOM05D000051 ORTHO05D000015 2.0e-09 66.6 161 28.6
Rhsim04G0037500 Rhododendron simsii HOM05D000051 ORTHO05D000015 2.0e-09 66.6 141 27.7
Ca_03848_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 2.6e-09 66.2 135 31.9
HanXRQChr13g0407771 Helianthus annuus HOM05D000051 ORTHO05D000015 2.6e-09 66.2 143 29.4
Lj3g0021941 Lotus japonicus HOM05D000051 ORTHO05D000015 3.4e-09 65.9 131 29.8
RhsimUnG0013000 Rhododendron simsii HOM05D022656 ORTHO05D022449 3.4e-09 65.9 141 27.7
MSTRG.15164 Avicennia marina HOM05D000051 ORTHO05D000015 5.7e-09 65.1 138 32.6
COL.COLO4_04293 Corchorus olitorius HOM05D000051 ORTHO05D000015 5.7e-09 65.1 99 37.4
Medtr2g072530 Medicago truncatula HOM05D000051 ORTHO05D000015 5.7e-09 65.1 158 27.2
Phvul.002G047900 Phaseolus vulgaris HOM05D000051 ORTHO05D000015 5.7e-09 65.1 141 30.5
Psat4g211000 Pisum sativum HOM05D000051 ORTHO05D000015 5.7e-09 65.1 130 33.1
Rhsim04G0000300 Rhododendron simsii HOM05D000051 ORTHO05D000015 5.7e-09 65.1 91 37.4
Duzib213G0754 Durio zibethinus HOM05D000051 ORTHO05D000015 7.5e-09 64.7 89 41.6
Lj3g0004141 Lotus japonicus HOM05D000051 ORTHO05D000015 7.5e-09 64.7 128 32.8
PSO017G7060 Papaver somniferum HOM05D000051 ORTHO05D000015 7.5e-09 64.7 92 39.1
vmacro11750 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 7.5e-09 64.7 146 34.9
COL.COLO4_37447 Corchorus olitorius HOM05D000051 ORTHO05D000015 1.3e-08 63.9 83 39.8
Medtr7g023310 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-08 63.9 148 30.4
Medtr3g048290 Medicago truncatula HOM05D000051 ORTHO05D000015 1.7e-08 63.5 124 33.9
TWI38G1547 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 1.7e-08 63.5 114 36.8
Nitab4.5_0011608g0030 Nicotiana tabacum HOM05D000051 ORTHO05D000015 2.2e-08 63.2 86 39.5
PSO478G2955 Papaver somniferum HOM05D000051 ORTHO05D000015 2.2e-08 63.2 150 34.0
PSO063G4990 Papaver somniferum HOM05D000051 ORTHO05D000015 2.8e-08 62.8 135 31.9
RcHm_v2.0_Chr5g0003811 Rosa chinensis HOM05D000051 ORTHO05D000015 2.8e-08 62.8 86 40.7
TPR.G16802 Trifolium pratense HOM05D000051 ORTHO05D000015 2.8e-08 62.8 138 30.4
VMungo1215G1023 Vigna mungo HOM05D000051 ORTHO05D000015 3.7e-08 62.4 143 27.3
Aqoxy1G03331 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 4.9e-08 62.0 134 33.6
arahy.Tifrunner.gnm1.ann1.RIMI91 Arachis hypogaea HOM05D000051 ORTHO05D000015 4.9e-08 62.0 143 27.3
Nitab4.5_0000397g0270 Nicotiana tabacum HOM05D000051 ORTHO05D000015 4.9e-08 62.0 86 38.4
PSO017G2530 Papaver somniferum HOM05D000051 ORTHO05D000015 4.9e-08 62.0 150 34.0
PGR042G1657 Punica granatum HOM05D000051 ORTHO05D000015 4.9e-08 62.0 131 29.8
Potri.011G121400 Populus trichocarpa HOM05D000051 ORTHO05D000015 6.3e-08 61.6 137 32.1
TPR.G15633 Trifolium pratense HOM05D000051 ORTHO05D000015 6.3e-08 61.6 127 33.1
Peaxi162Scf00450g00852 Petunia axillaris HOM05D000051 ORTHO05D000015 8.3e-08 61.2 92 33.7
TPR.G6826 Trifolium pratense HOM05D000051 ORTHO05D000015 8.3e-08 61.2 140 30.0
AUR62020671 Chenopodium quinoa HOM05D000051 ORTHO05D000015 1.1e-07 60.8 147 32.0
AUR62020683 Chenopodium quinoa HOM05D000051 ORTHO05D000015 1.1e-07 60.8 147 32.0
Lj3g0011429 Lotus japonicus HOM05D000051 ORTHO05D000015 1.4e-07 60.5 147 31.3
TPR.G3816 Trifolium pratense HOM05D000051 ORTHO05D000015 1.4e-07 60.5 113 31.0
Lj3g0010579 Lotus japonicus HOM05D000051 ORTHO05D000015 1.8e-07 60.1 145 28.3
Ciclev10011664m.g Citrus clementina HOM05D000051 ORTHO05D000015 2.4e-07 59.7 147 27.9
Aqoxy1G01789 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 3.1e-07 59.3 141 32.6
Ciclev10013738m.g Citrus clementina HOM05D000051 ORTHO05D000015 3.1e-07 59.3 138 34.8
Eucgr.E04099 Eucalyptus grandis HOM05D000051 ORTHO05D000015 4.1e-07 58.9 130 33.1
Glyma.20G142600 Glycine max HOM05D000051 ORTHO05D000015 4.1e-07 58.9 89 40.4
Lj3g0000880 Lotus japonicus HOM05D000051 ORTHO05D000015 4.1e-07 58.9 145 29.0
PSO541G5851 Papaver somniferum HOM05D000051 ORTHO05D000015 4.1e-07 58.9 158 30.4
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 4.1e-07 58.9 158 32.9
TPR.G6877 Trifolium pratense HOM05D000051 ORTHO05D000015 4.1e-07 58.9 151 27.2
Lj1A869T76 Lonicera japonica HOM05D000051 ORTHO05D000015 5.4e-07 58.5 108 29.6
PSO478G5315 Papaver somniferum HOM05D000051 ORTHO05D000015 7.0e-07 58.2 162 28.4
RhsimUnG0013100 Rhododendron simsii HOM05D000051 ORTHO05D000015 7.0e-07 58.2 144 27.8
AUR62020682 Chenopodium quinoa HOM05D000051 ORTHO05D000015 9.2e-07 57.8 151 32.5
arahy.Tifrunner.gnm1.ann1.45LTGK Arachis hypogaea HOM05D000051 ORTHO05D000015 1.2e-06 57.4 140 27.9
Ciclev10022657m.g Citrus clementina HOM05D017481 ORTHO05D011342 1.2e-06 57.4 131 29.8
Dinv42542 Davidia involucrata HOM05D000051 ORTHO05D000015 1.6e-06 57.0 165 32.7
Migut.M00848 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.6e-06 57.0 118 28.8
Glyma.13G262700 Glycine max HOM05D000051 ORTHO05D000015 1.6e-06 57.0 154 30.5
Lsat_1_v5_gn_7_108840 Lactuca sativa HOM05D000051 ORTHO05D000015 1.6e-06 57.0 125 27.2
Lj3g0005297 Lotus japonicus HOM05D000051 ORTHO05D000015 1.6e-06 57.0 145 26.9
Duzib187G0942 Durio zibethinus HOM05D000051 ORTHO05D000015 2.0e-06 56.6 78 37.2
AL7G40650 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.7e-06 56.2 143 29.4
Migut.M00829 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.7e-06 56.2 136 32.4
Glyma.15G242200 Glycine max HOM05D000051 ORTHO05D000015 2.7e-06 56.2 153 28.8
AUR62044238 Chenopodium quinoa HOM05D000051 ORTHO05D000015 3.5e-06 55.8 163 28.2
Ciclev10015203m.g Citrus clementina HOM05D000051 ORTHO05D000015 3.5e-06 55.8 132 33.3
FvH4_4g14841 Fragaria vesca HOM05D000051 ORTHO05D000015 3.5e-06 55.8 123 28.5
Lj2A948G37 Lonicera japonica HOM05D000051 ORTHO05D000015 3.5e-06 55.8 76 39.5
C03p36450 Brassica napus HOM05D000051 ORTHO05D000015 4.5e-06 55.5 114 32.5
BolC3t15957H Brassica oleracea HOM05D000051 ORTHO05D000015 4.5e-06 55.5 114 32.5
HanXRQChr17g0564731 Helianthus annuus HOM05D000051 ORTHO05D000015 4.5e-06 55.5 147 29.3
Medtr2g007550 Medicago truncatula HOM05D000051 ORTHO05D000015 4.5e-06 55.5 105 34.3
arahy.Tifrunner.gnm1.ann1.GLFE0R Arachis hypogaea HOM05D000051 ORTHO05D000015 5.9e-06 55.1 126 28.6
PSO832G1261 Papaver somniferum HOM05D000051 ORTHO05D000015 5.9e-06 55.1 135 31.1
PGR083G0823 Punica granatum HOM05D000051 ORTHO05D000015 5.9e-06 55.1 158 26.6
QL02p085131 Quercus lobata HOM05D000051 ORTHO05D000015 5.9e-06 55.1 165 32.1
TWI14G0414 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 5.9e-06 55.1 110 30.9
Lj3g0017701 Lotus japonicus HOM05D000051 ORTHO05D000015 7.7e-06 54.7 143 28.0
Medtr4g130200 Medicago truncatula HOM05D000051 ORTHO05D000015 7.7e-06 54.7 127 29.9
Rhsim04G0037400 Rhododendron simsii HOM05D000051 ORTHO05D000015 7.7e-06 54.7 144 27.1
TPR.G16809 Trifolium pratense HOM05D000051 ORTHO05D000015 7.7e-06 54.7 135 30.4


User provided reference genes

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