Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p041129 Quercus lobata HOM05D004679 ORTHO05D005524 4.1e-146 521.5 300 100.0
CiPaw.16G065600 Carya illinoinensis HOM05D004679 ORTHO05D005524 2.0e-68 263.5 316 52.5
CiPaw.15G086800 Carya illinoinensis HOM05D004679 ORTHO05D005524 6.5e-67 258.5 307 48.9
Haze_17496 Corylus avellana HOM05D004679 ORTHO05D005524 3.5e-60 236.1 312 55.8
Cfa018585 Carpinus fangiana HOM05D004679 ORTHO05D005524 8.6e-59 231.5 308 55.5
Thecc.02G227400 Theobroma cacao HOM05D004679 ORTHO05D005524 3.3e-58 229.6 318 51.3
Duzib268G0767 Durio zibethinus HOM05D004679 ORTHO05D005524 4.4e-55 219.2 318 46.5
Potri.008G121700 Populus trichocarpa HOM05D004679 ORTHO05D005524 4.4e-55 219.2 328 48.8
Manes.06G066900 Manihot esculenta HOM05D004679 ORTHO05D005524 9.8e-55 218.0 332 50.6
Sabra10G0093600 Salix brachista HOM05D004679 ORTHO05D005524 6.4e-54 215.3 329 50.8
Gohir.A03G147600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 8.3e-54 214.9 318 45.6
Gorai.005G192000 Gossypium raimondii HOM05D004679 ORTHO05D005524 1.8e-53 213.8 318 45.3
Potri.010G123600 Populus trichocarpa HOM05D004679 ORTHO05D005524 2.7e-52 209.9 332 45.5
COL.COLO4_05113 Corchorus olitorius HOM05D004679 ORTHO05D005524 4.6e-52 209.1 314 43.9
FvH4_4g27210 Fragaria vesca HOM05D004679 ORTHO05D005524 6.6e-51 205.3 313 50.2
Dinv31629 Davidia involucrata HOM05D004679 ORTHO05D005524 1.1e-50 204.5 305 45.6
FAN12G3270 Fragaria x ananassa HOM05D004679 ORTHO05D005524 2.5e-50 203.4 313 49.5
FAN22G1304 Fragaria x ananassa HOM05D004679 ORTHO05D005524 2.5e-50 203.4 316 51.3
Duzib248G1266 Durio zibethinus HOM05D004679 ORTHO05D005524 4.3e-50 202.6 322 47.2
FAN12G2517 Fragaria x ananassa HOM05D004679 ORTHO05D005524 7.3e-50 201.8 313 49.5
Sabra08G0092400 Salix brachista HOM05D004679 ORTHO05D005524 8.0e-49 198.4 331 50.5
FAN07G0705 Fragaria x ananassa HOM05D004679 ORTHO05D005524 1.8e-48 197.2 313 44.1
CSS0006602 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 2.3e-48 196.8 308 45.8
CSS0017035 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 3.1e-48 196.4 308 45.5
RcHm_v2.0_Chr4g0435001 Rosa chinensis HOM05D004679 ORTHO05D005524 3.4e-47 193.0 318 49.1
Manes.14G103500 Manihot esculenta HOM05D004679 ORTHO05D005524 4.4e-47 192.6 324 50.0
Ciclev10015600m.g Citrus clementina HOM05D004679 ORTHO05D005524 3.7e-46 189.5 341 44.9
Solyc05g009420.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 4.9e-46 189.1 314 44.6
TWI79G1695 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 4.9e-46 189.1 315 46.0
Sopen05g005230 Solanum pennellii HOM05D004679 ORTHO05D005524 8.3e-46 188.3 314 44.6
TAR629G3220 Trochodendron aralioides HOM05D004679 ORTHO05D005524 1.6e-44 184.1 311 47.3
Duzib251G0437 Durio zibethinus HOM05D004679 ORTHO05D005524 2.0e-44 183.7 308 40.9
CSS0010437 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 3.5e-44 183.0 312 45.2
Nitab4.5_0003715g0040 Nicotiana tabacum HOM05D004679 ORTHO05D005524 3.5e-44 183.0 313 37.1
TAR371G1108 Trochodendron aralioides HOM05D004679 ORTHO05D005524 4.6e-44 182.6 312 39.7
CSS0014673 Camellia sinensis var. sinensis HOM05D004679 ORTHO05D005524 6.0e-44 182.2 313 44.7
Nitab4.5_0005669g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 4.3e-42 176.0 307 37.5
Nn3g17866 Nelumbo nucifera HOM05D004679 ORTHO05D005524 2.8e-41 173.3 312 43.9
Gohir.A04G097850 Gossypium hirsutum HOM05D004679 ORTHO05D005524 4.7e-41 172.6 314 37.6
Nn4g23867 Nelumbo nucifera HOM05D004679 ORTHO05D005524 4.7e-41 172.6 322 47.5
Eucgr.B03012 Eucalyptus grandis HOM05D004679 ORTHO05D005524 8.1e-41 171.8 321 36.8
Atru.chr11.115 Acer truncatum HOM05D004679 ORTHO05D005524 1.8e-40 170.6 333 43.2
Gohir.D02G170800 Gossypium hirsutum HOM05D004679 ORTHO05D005524 2.3e-40 170.2 272 43.8
TWI31G1336 Tripterygium wilfordii HOM05D004679 ORTHO05D005524 4.0e-40 169.5 307 43.6
THA.LOC104821925 Tarenaya hassleriana HOM05D004679 ORTHO05D005524 6.8e-40 168.7 323 46.4
SGA_v2.0_scaffold38G14941 Striga asiatica HOM05D004679 ORTHO05D005524 1.2e-39 167.9 313 37.7
PGSC0003DMG400014542 Solanum tuberosum HOM05D004679 ORTHO05D005524 1.5e-39 167.5 295 43.4
Hma1.2p1_0061F.1_g033750 Hydrangea macrophylla HOM05D004679 ORTHO05D005524 4.4e-39 166.0 317 45.1
VMungo1215G2497 Vigna mungo HOM05D004679 ORTHO05D005524 1.1e-37 161.4 322 39.8
Prupe.1G312600 Prunus persica HOM05D004679 ORTHO05D005524 1.9e-37 160.6 331 39.9
MSTRG.848 Avicennia marina HOM05D004679 ORTHO05D005524 4.1e-37 159.5 320 37.2
TPR.G27958 Trifolium pratense HOM05D004679 ORTHO05D005524 4.1e-37 159.5 324 36.7
ClCG05G022630 Citrullus lanatus HOM05D004679 ORTHO05D005524 7.1e-37 158.7 323 34.4
MELO3C012256.2 Cucumis melo HOM05D004679 ORTHO05D005524 9.2e-37 158.3 329 33.7
Glyma.08G261000 Glycine max HOM05D004679 ORTHO05D005524 9.2e-37 158.3 319 44.5
Phvul.003G030600 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 1.2e-36 157.9 320 36.2
Cc11_g10010 Coffea canephora HOM05D004679 ORTHO05D005524 1.6e-36 157.5 336 41.7
CsaV3_5G034410 Cucumis sativus L. HOM05D004679 ORTHO05D005524 2.1e-36 157.1 329 32.8
MSTRG.7662 Avicennia marina HOM05D004679 ORTHO05D005524 2.7e-36 156.8 316 41.1
Lj6P756T16 Lonicera japonica HOM05D004679 ORTHO05D005524 2.7e-36 156.8 312 37.5
Actinidia16661 Actinidia chinensis HOM05D004679 ORTHO05D005524 7.8e-36 155.2 190 45.8
MD16G1041500 Malus domestica HOM05D004679 ORTHO05D005524 1.3e-35 154.5 327 40.1
Psat2g095800 Pisum sativum HOM05D004679 ORTHO05D005524 1.3e-35 154.5 317 40.1
CANSAT01G1145 Cannabis sativa HOM05D004679 ORTHO05D005524 1.7e-35 154.1 313 43.8
PGR102G2503 Punica granatum HOM05D004679 ORTHO05D005524 3.9e-35 152.9 326 44.5
Glyma.01G080500 Glycine max HOM05D004679 ORTHO05D005524 2.5e-34 150.2 326 43.9
Migut.L01056 Erythranthe guttata HOM05D004679 ORTHO05D005524 3.3e-34 149.8 331 37.2
Lalb_Chr10g0100061 Lupinus albus HOM05D004679 ORTHO05D005524 4.3e-34 149.4 310 46.5
Ca_07534_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 5.6e-34 149.1 323 44.9
MBI09_g16518_MAGBIO Magnolia biondii HOM05D004679 ORTHO05D005524 1.6e-33 147.5 308 33.1
Rhsim09G0106900 Rhododendron simsii HOM05D004679 ORTHO05D005524 1.6e-33 147.5 298 36.6
Aqoxy3G00274 Aquilegia oxysepala HOM05D004679 ORTHO05D005524 2.1e-33 147.1 326 44.8
Medtr5g056480 Medicago truncatula HOM05D004679 ORTHO05D005524 2.1e-33 147.1 325 40.6
Gorai.012G122000 Gossypium raimondii HOM05D004679 ORTHO05D005524 2.8e-33 146.7 305 35.1
Cpa.g.sc1.28 Carica papaya HOM05D004679 ORTHO05D005524 3.6e-33 146.4 201 47.3
Gohir.D04G137600 Gossypium hirsutum HOM05D004679 ORTHO05D005524 6.2e-33 145.6 305 34.8
MD13G1040500 Malus domestica HOM05D004679 ORTHO05D005524 5.2e-32 142.5 327 34.6
Lalb_Chr04g0254681 Lupinus albus HOM05D004679 ORTHO05D005524 1.2e-31 141.4 306 37.9
ClCG08G005010 Citrullus lanatus HOM05D004679 ORTHO05D005524 2.6e-31 140.2 309 33.7
Oeu003185.3 Olea europaea HOM05D004679 ORTHO05D005524 2.6e-31 140.2 304 32.6
SGA_v2.0_scaffold36G14543 Striga asiatica HOM05D004679 ORTHO05D005524 2.6e-31 140.2 312 37.5
Lj2g0027656 Lotus japonicus HOM05D004679 ORTHO05D005524 5.8e-31 139.0 320 40.0
CsaV3_6G003280 Cucumis sativus L. HOM05D004679 ORTHO05D005524 7.6e-31 138.7 311 37.6
Sp5g23510 Schrenkiella parvula HOM05D004679 ORTHO05D005524 8.4e-30 135.2 325 43.7
SalBow8G2470 Salvia bowleyana HOM05D004679 ORTHO05D005524 1.1e-29 134.8 288 35.4
Dinv21072 Davidia involucrata HOM05D004679 ORTHO05D005524 1.4e-29 134.4 189 44.4
A07p34850 Brassica napus HOM05D004679 ORTHO05D005524 5.4e-29 132.5 319 43.9
MELO3C011535.2 Cucumis melo HOM05D004679 ORTHO05D005524 5.4e-29 132.5 312 36.2
BcaC08g46281 Brassica carinata HOM05D004679 ORTHO05D005524 9.2e-29 131.7 318 41.8
BcaC08g46285 Brassica carinata HOM05D004679 ORTHO05D005524 9.2e-29 131.7 318 41.8
C06p41510 Brassica napus HOM05D004679 ORTHO05D005524 9.2e-29 131.7 318 42.8
BolC6t39272H Brassica oleracea HOM05D004679 ORTHO05D005524 9.2e-29 131.7 318 42.8
Sed0007978 Sechium edule HOM05D004679 ORTHO05D005524 2.1e-28 130.6 287 35.9
AT1G68440 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 3.5e-28 129.8 328 36.9
AL2G27300 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 4.6e-28 129.4 328 40.5
BcaB03g15806 Brassica carinata HOM05D004679 ORTHO05D005524 6.0e-28 129.0 315 37.5
Sed0013939 Sechium edule HOM05D004679 ORTHO05D005524 6.0e-28 129.0 333 30.6
BcaB05g24380 Brassica carinata HOM05D004679 ORTHO05D005524 1.0e-27 128.3 324 42.9
Thhalv10018918m.g Eutrema salsugineum HOM05D004679 ORTHO05D005524 3.9e-27 126.3 327 42.2
A02p14990 Brassica napus HOM05D004679 ORTHO05D005524 1.9e-26 124.0 329 43.2
BolC2t08557H Brassica oleracea HOM05D004679 ORTHO05D005524 1.9e-26 124.0 329 42.9
BcaC03g14945 Brassica carinata HOM05D004679 ORTHO05D005524 5.6e-26 122.5 324 41.7
CARHR061220 Cardamine hirsuta HOM05D004679 ORTHO05D005524 1.2e-25 121.3 321 39.6
C02p24550 Brassica napus HOM05D004679 ORTHO05D005524 2.1e-25 120.6 330 41.5
Nitab4.5_0005548g0020 Nicotiana tabacum HOM05D004679 ORTHO05D005524 2.8e-25 120.2 279 34.8
Ah.02g128020 Amaranthus hybridus HOM05D004679 ORTHO05D005524 1.8e-24 117.5 318 35.8
Sed0011079 Sechium edule HOM05D004679 ORTHO05D005524 1.8e-24 117.5 326 33.4
Sc14g0007400 Simmondsia chinensis HOM05D004679 ORTHO05D005524 4.0e-24 116.3 306 37.6
BraA02t06566Z Brassica rapa HOM05D004679 ORTHO05D005524 6.9e-24 115.5 330 40.9
Sp1g22820 Schrenkiella parvula HOM05D004679 ORTHO05D005524 1.5e-23 114.4 307 42.7
Nitab4.5_0000057g0200 Nicotiana tabacum HOM05D004679 ORTHO05D005524 2.0e-23 114.0 279 34.4
Ca_11162_v3 Cicer arietinum L. HOM05D004679 ORTHO05D005524 4.4e-23 112.8 296 39.9
arahy.Tifrunner.gnm1.ann1.ZDDP39 Arachis hypogaea HOM05D004679 ORTHO05D005524 2.2e-22 110.5 300 34.3
Carub.0002s1495 Capsella rubella HOM05D004679 ORTHO05D005524 2.2e-22 110.5 331 39.6
AL1G39920 Arabidopsis lyrata HOM05D004679 ORTHO05D005524 4.2e-21 106.3 306 38.2
Psat6g226440 Pisum sativum HOM05D004679 ORTHO05D005524 5.4e-21 105.9 156 39.7
Carub.0001s2510 Capsella rubella HOM05D004679 ORTHO05D005524 7.1e-21 105.5 307 34.2
AT1G25400 Arabidopsis thaliana HOM05D004679 ORTHO05D005524 9.3e-21 105.1 311 33.8
Glyma.10G273200 Glycine max HOM05D004679 ORTHO05D005524 1.2e-20 104.8 187 38.5
Oeu034235.1 Olea europaea HOM05D004679 ORTHO05D005524 1.2e-20 104.8 297 36.4
Ah.03g137540 Amaranthus hybridus HOM05D004679 ORTHO05D005524 7.8e-20 102.1 301 38.5
TPR.G18826 Trifolium pratense HOM05D004679 ORTHO05D005524 1.3e-19 101.3 265 43.4
HanXRQChr16g0529431 Helianthus annuus HOM05D004679 ORTHO05D005524 2.3e-19 100.5 254 39.4
Gohir.A05G321608 Gossypium hirsutum HOM05D004679 ORTHO05D005524 3.0e-19 100.1 234 37.6
Glyma.20G116700 Glycine max HOM05D004679 ORTHO05D005524 6.6e-19 99.0 181 39.2
BcaC06g35214 Brassica carinata HOM05D004679 ORTHO05D005524 8.7e-19 98.6 310 38.1
C07p18590 Brassica napus HOM05D004679 ORTHO05D005524 8.7e-19 98.6 310 38.1
BolC7t42370H Brassica oleracea HOM05D004679 ORTHO05D005524 8.7e-19 98.6 310 38.1
DCAR_030166 Daucus carota HOM05D004679 ORTHO05D005524 2.5e-18 97.1 257 28.4
PSO017G6556 Papaver somniferum HOM05D004679 ORTHO05D005524 1.6e-17 94.4 302 38.7
EL10Ac6g14380 Beta vulgaris HOM05D004679 ORTHO05D005524 6.2e-17 92.4 315 38.1
A07p12580 Brassica napus HOM05D004679 ORTHO05D005524 6.2e-17 92.4 304 33.6
Eucgr.G02311 Eucalyptus grandis HOM05D004679 ORTHO05D005524 1.8e-16 90.9 304 34.9
BraA07t29036Z Brassica rapa HOM05D004679 ORTHO05D005524 5.3e-16 89.4 312 35.9
CARHR026080 Cardamine hirsuta HOM05D004679 ORTHO05D005524 6.9e-16 89.0 301 34.9
Phvul.007G028300 Phaseolus vulgaris HOM05D004679 ORTHO05D005524 6.9e-16 89.0 138 41.3
Lsat_1_v5_gn_4_15920 Lactuca sativa HOM05D004679 ORTHO05D005524 9.0e-16 88.6 256 31.6
BcaB03g14040 Brassica carinata HOM05D004679 ORTHO05D005524 1.2e-15 88.2 312 36.9
Lalb_Chr21g0308861 Lupinus albus HOM05D004679 ORTHO05D005524 1.2e-15 88.2 160 35.6
Aa31LG7G9090 Aethionema arabicum HOM05D004679 ORTHO05D005524 1.5e-15 87.8 297 39.1
DCAR_026738 Daucus carota HOM05D004679 ORTHO05D005524 2.0e-15 87.4 291 26.1
PGSC0003DMG400005982 Solanum tuberosum HOM05D004679 ORTHO05D005524 7.6e-15 85.5 291 30.6
Thhalv10008406m.g Eutrema salsugineum HOM05D004679 ORTHO05D005524 1.7e-14 84.3 292 37.7
Sopen04g002310 Solanum pennellii HOM05D004679 ORTHO05D005524 1.7e-14 84.3 293 28.0
VMungo0720G2998 Vigna mungo HOM05D004679 ORTHO05D005524 1.7e-14 84.3 270 38.9
CDE06G1731 Ceratophyllum demersum HOM05D004679 ORTHO05D005524 2.9e-14 83.6 284 25.7
Solyc04g007250.1 Solanum lycopersicum HOM05D004679 ORTHO05D005524 6.4e-14 82.4 291 28.2
Lalb_Chr06g0166021 Lupinus albus HOM05D004679 ORTHO05D005524 9.3e-13 78.6 291 35.4
Medtr1g110550 Medicago truncatula HOM05D004679 ORTHO05D005524 2.1e-12 77.4 266 38.0
Lj5g0021418 Lotus japonicus HOM05D004679 ORTHO05D005524 6.0e-12 75.9 176 31.2
Peaxi162Scf00753g00057 Petunia axillaris HOM05D004679 ORTHO05D005524 8.7e-11 72.0 304 24.3
ECA234G4300 Erigeron canadensis HOM05D004679 ORTHO05D005524 4.8e-09 66.2 134 39.6
Eucgr.D00333 Eucalyptus grandis HOM05D004679 ORTHO05D005524 4.8e-09 66.2 85 47.1
SEGI_14232 Sequoiadendron giganteum HOM05D017838 ORTHO05D018381 2.2e-06 57.4 120 28.3


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