Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p037957 Quercus lobata HOM05D000003 ORTHO05D029996 3.0e-78 295.0 144 100.0
QL01p027638 Quercus lobata HOM05D000003 ORTHO05D000167 5.6e-32 141.4 94 73.4
QL04p086248 Quercus lobata HOM05D000003 ORTHO05D000004 4.7e-31 138.3 94 72.3
QL12p020474 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-25 119.4 106 57.5
QL05p018687 Quercus lobata HOM05D000106 ORTHO05D000160 3.0e-25 119.0 100 57.0
QL06p046108 Quercus lobata HOM05D028670 ORTHO05D000167 8.4e-20 100.9 102 50.0
QL06p052521 Quercus lobata HOM05D000003 ORTHO05D000167 5.1e-17 91.7 102 45.1
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 3.3e-16 89.0 88 54.5
QL11p055311 Quercus lobata HOM05D000003 ORTHO05D000004 9.0e-14 80.9 52 73.1
QL04p022409 Quercus lobata HOM05D000003 ORTHO05D000004 9.9e-13 77.4 99 41.4
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 9.9e-13 77.4 115 40.0
QL07p039728 Quercus lobata HOM05D000003 ORTHO05D000004 6.4e-12 74.7 102 42.2
QL04p096362 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-11 72.4 100 38.0
QL04p035197 Quercus lobata HOM05D000003 ORTHO05D036413 7.1e-11 71.2 94 40.4
QL09p054057 Quercus lobata HOM05D000003 ORTHO05D000004 7.1e-11 71.2 110 35.5
QL05p038991 Quercus lobata HOM05D000003 ORTHO05D000167 9.3e-11 70.9 69 55.1
QL02p027736 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-10 70.5 110 39.1
QL04p096329 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-10 70.5 100 37.0
QL10p021387 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-10 69.7 106 40.6
CSS0031955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 2.7e-10 69.3 120 34.2
QL05p012065 Quercus lobata HOM05D000003 ORTHO05D000167 3.5e-10 68.9 100 39.0
QL09p043312 Quercus lobata HOM05D000003 ORTHO05D000167 3.5e-10 68.9 98 39.8
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 4.6e-10 68.6 100 38.0
QL10p017193 Quercus lobata HOM05D000003 ORTHO05D000167 4.6e-10 68.6 64 54.7
QL04p058624 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-09 67.4 103 35.0
QL03p038570 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-09 66.6 112 34.8
QL07p025038 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-09 66.6 102 37.3
QL12p001149 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-09 66.6 91 40.7
QL02p051981 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-09 66.2 113 33.6
QL04p009936 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-09 66.2 103 34.0
QL04p093906 Quercus lobata HOM05D000003 ORTHO05D000004 3.0e-09 65.9 112 32.1
QL04p056296 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-09 65.5 112 33.9
QL05p017790 Quercus lobata HOM05D000003 ORTHO05D000167 3.9e-09 65.5 113 35.4
CANSAT56G1970 Cannabis sativa HOM05D000003 ORTHO05D000167 5.1e-09 65.1 115 37.4
QL05p068740 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-09 65.1 60 55.0
QL05p069113 Quercus lobata HOM05D000003 ORTHO05D000004 5.1e-09 65.1 60 55.0
QL08p028913 Quercus lobata HOM05D000328 ORTHO05D000191 5.1e-09 65.1 93 39.8
Atru.chr3.896 Acer truncatum HOM05D000039 ORTHO05D001943 6.7e-09 64.7 102 37.3
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 8.7e-09 64.3 99 36.4
QL05p065310 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-08 63.9 101 35.6
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-08 63.9 66 50.0
QL12p015728 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-08 63.9 100 37.0
QL02p068098 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-08 63.5 92 35.9
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-08 63.5 51 60.8
QL03p035115 Quercus lobata HOM05D000254 ORTHO05D000165 1.9e-08 63.2 100 37.0
Atru.chr3.885 Acer truncatum HOM05D000039 ORTHO05D001943 2.5e-08 62.8 100 37.0
QL04p061525 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-08 62.8 107 33.6
QL05p043982 Quercus lobata HOM05D000003 ORTHO05D000004 2.5e-08 62.8 111 33.3
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 2.5e-08 62.8 74 44.6
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 3.3e-08 62.4 108 33.3
QL05p042365 Quercus lobata HOM05D000003 ORTHO05D000167 4.3e-08 62.0 107 33.6
Atru.chr2.1340 Acer truncatum HOM05D000003 ORTHO05D000167 5.6e-08 61.6 113 34.5
Atru.chr2.176 Acer truncatum HOM05D000003 ORTHO05D000167 5.6e-08 61.6 113 33.6
QL02p004198 Quercus lobata HOM05D028670 ORTHO05D029996 5.6e-08 61.6 72 43.1
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 5.6e-08 61.6 141 30.5
QL02p087824 Quercus lobata HOM05D000003 ORTHO05D000167 9.6e-08 60.8 102 36.3
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 9.6e-08 60.8 46 60.9
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 9.6e-08 60.8 46 60.9
Atru.chr2.677 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-07 60.5 120 29.2
QL05p051227 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-07 60.5 97 33.0
Atru.chr4.1218 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-07 60.1 112 33.9
QL02p087863 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-07 59.7 100 34.0
QL03p033496 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-07 59.7 102 34.3
QL09p000395 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-07 59.7 99 35.4
QL09p011252 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-07 59.7 101 35.6
Atru.chr13.1818 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-07 59.3 154 27.9
Atru.chr2.2733 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-07 59.3 109 31.2
Atru.chr9.643 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-07 59.3 104 33.7
QL06p030629 Quercus lobata HOM05D000003 ORTHO05D000167 2.8e-07 59.3 108 34.3
QL11p013009 Quercus lobata HOM05D000003 ORTHO05D000167 2.8e-07 59.3 111 32.4
Atru.chr2.931 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-07 58.9 102 37.3
Atru.chr4.2116 Acer truncatum HOM05D000003 ORTHO05D000004 3.7e-07 58.9 106 32.1
Aqoxy2G02424 Aquilegia oxysepala HOM05D000003 ORTHO05D008897 3.7e-07 58.9 106 37.7
QL12p022431 Quercus lobata HOM05D000003 ORTHO05D000004 3.7e-07 58.9 101 34.7
Atru.chr10.114 Acer truncatum HOM05D000003 ORTHO05D000167 4.8e-07 58.5 112 33.9
Atru.chr10.97 Acer truncatum HOM05D000003 ORTHO05D000167 4.8e-07 58.5 112 33.9
QL04p035049 Quercus lobata HOM05D000003 ORTHO05D000126 4.8e-07 58.5 103 33.0
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 4.8e-07 58.5 103 33.0
Atru.ctg24.6 Acer truncatum HOM05D000003 ORTHO05D000004 6.2e-07 58.2 96 36.5
CANSAT56G2889 Cannabis sativa HOM05D000003 ORTHO05D000004 6.2e-07 58.2 108 33.3
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 6.2e-07 58.2 117 29.1
QL08p048475 Quercus lobata HOM05D000163 ORTHO05D013581 6.2e-07 58.2 97 27.8
QL10p030412 Quercus lobata HOM05D000003 ORTHO05D000167 6.2e-07 58.2 107 31.8
QL10p052676 Quercus lobata HOM05D000003 ORTHO05D000167 6.2e-07 58.2 97 35.1
QL93p0205_0033 Quercus lobata HOM05D000003 ORTHO05D000004 6.2e-07 58.2 100 34.0
Atru.chr3.1566 Acer truncatum HOM05D000003 ORTHO05D000167 8.1e-07 57.8 102 34.3
Atru.chr3.1587 Acer truncatum HOM05D000003 ORTHO05D000004 8.1e-07 57.8 102 34.3
Atru.chr4.2213 Acer truncatum HOM05D000003 ORTHO05D000167 8.1e-07 57.8 72 47.2
CANSAT80G0814 Cannabis sativa HOM05D000003 ORTHO05D000004 8.1e-07 57.8 107 33.6
QL04p065270 Quercus lobata HOM05D000003 ORTHO05D000004 8.1e-07 57.8 99 38.4
QL05p076321 Quercus lobata HOM05D000003 ORTHO05D000004 8.1e-07 57.8 64 45.3
QL12p032525 Quercus lobata HOM05D000003 ORTHO05D000167 8.1e-07 57.8 108 28.7
CANSAT56G0133 Cannabis sativa HOM05D000003 ORTHO05D000167 1.1e-06 57.4 106 33.0
QL04p021054 Quercus lobata HOM05D000688 ORTHO05D005697 1.1e-06 57.4 105 35.2
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-06 57.4 118 26.3
Atru.chr7.293 Acer truncatum HOM05D000003 ORTHO05D000167 1.4e-06 57.0 104 35.6
Atru.chr9.494 Acer truncatum HOM05D000003 ORTHO05D000006 1.4e-06 57.0 102 34.3
CiPaw.09G154700 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.4e-06 57.0 101 35.6
QL04p004482 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-06 57.0 88 36.4
QL05p021884 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-06 57.0 104 29.8
QL05p054879 Quercus lobata HOM05D000003 ORTHO05D000126 1.4e-06 57.0 96 36.5
QL06p012052 Quercus lobata HOM05D000003 ORTHO05D028653 1.4e-06 57.0 99 33.3
CSS0031820 Camellia sinensis var. sinensis HOM05D000698 ORTHO05D000004 1.8e-06 56.6 102 29.4
CANSAT11G1274 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-06 56.6 107 32.7
CANSAT64G0231 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-06 56.6 112 33.9
Lj1P944T58 Lonicera japonica HOM05D141415 ORTHO05D029996 1.8e-06 56.6 111 31.5
QL10p036902 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 56.6 114 32.5
QL11p056556 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-06 56.6 98 33.7
Atru.chr10.669 Acer truncatum HOM05D000003 ORTHO05D000004 2.4e-06 56.2 107 36.4
Atru.chr13.1607 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-06 56.2 134 33.6
Atru.chr7.573 Acer truncatum HOM05D000003 ORTHO05D000167 2.4e-06 56.2 86 37.2
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 56.2 112 37.5
CANSAT64G2778 Cannabis sativa HOM05D000003 ORTHO05D000167 2.4e-06 56.2 110 30.0
QL05p007523 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-06 56.2 62 48.4
QL08p027913 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-06 56.2 89 36.0
QL09p014828 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-06 56.2 105 33.3
QL11p053095 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-06 56.2 115 31.3
QL12p001891 Quercus lobata HOM05D000003 ORTHO05D000167 2.4e-06 56.2 108 32.4
TAR331G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 2.4e-06 56.2 101 31.7
Atru.chr1.1364 Acer truncatum HOM05D000003 ORTHO05D000167 3.1e-06 55.8 100 30.0
CANSAT78G1435 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-06 55.8 121 31.4
TWI23G0127 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.1e-06 55.8 99 38.4
CANSAT11G0329 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-06 55.5 99 31.3
QL03p039168 Quercus lobata HOM05D000003 ORTHO05D000167 4.0e-06 55.5 102 32.4
QL08p050440 Quercus lobata HOM05D000003 ORTHO05D000167 4.0e-06 55.5 69 42.0
Atru.chr12.2225 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-06 55.1 104 34.6
Atru.chr12.350 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-06 55.1 108 33.3
Atru.chr6.1815 Acer truncatum HOM05D000003 ORTHO05D000167 5.3e-06 55.1 106 32.1
CANSAT01G1093 Cannabis sativa HOM05D000003 ORTHO05D000167 5.3e-06 55.1 110 29.1
CANSAT80G2787 Cannabis sativa HOM05D000003 ORTHO05D000167 5.3e-06 55.1 131 28.2
QL01p035119 Quercus lobata HOM05D000003 ORTHO05D000167 5.3e-06 55.1 105 29.5
QL09p009765 Quercus lobata HOM05D000003 ORTHO05D000167 5.3e-06 55.1 113 33.6
Atru.chr9.1299 Acer truncatum HOM05D000003 ORTHO05D000167 6.9e-06 54.7 103 36.9
CANSAT25G3689 Cannabis sativa HOM05D000003 ORTHO05D000167 6.9e-06 54.7 100 31.0
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 6.9e-06 54.7 112 33.9
QL05p029410 Quercus lobata HOM05D000003 ORTHO05D000004 6.9e-06 54.7 42 57.1
QL11p051604 Quercus lobata HOM05D000003 ORTHO05D000167 6.9e-06 54.7 66 40.9
QL11p056495 Quercus lobata HOM05D000003 ORTHO05D000167 6.9e-06 54.7 63 44.4
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 6.9e-06 54.7 102 30.4
Atru.chr1.3159 Acer truncatum HOM05D000003 ORTHO05D000167 9.0e-06 54.3 104 32.7
Atru.chr13.1583 Acer truncatum HOM05D000003 ORTHO05D000167 9.0e-06 54.3 108 35.2
CANSAT01G2358 Cannabis sativa HOM05D000003 ORTHO05D000167 9.0e-06 54.3 107 30.8
CANSAT54G0363 Cannabis sativa HOM05D000003 ORTHO05D000004 9.0e-06 54.3 75 40.0
QL02p081060 Quercus lobata HOM05D000003 ORTHO05D000167 9.0e-06 54.3 51 47.1
QL04p033465 Quercus lobata HOM05D000003 ORTHO05D011877 9.0e-06 54.3 101 31.7
QL04p045343 Quercus lobata HOM05D000003 ORTHO05D000004 9.0e-06 54.3 79 38.0
QL06p022516 Quercus lobata HOM05D000003 ORTHO05D000167 9.0e-06 54.3 88 37.5
TPR.G26136 Trifolium pratense HOM05D000147 ORTHO05D001254 9.0e-06 54.3 106 33.0


User provided reference genes

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