Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 2.1e-51 205.3 98 100.0
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 9.4e-39 163.3 88 83.0
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.8e-35 151.8 88 80.7
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 8.2e-35 150.2 88 77.3
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.2e-35 150.2 88 79.5
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.2e-35 150.2 88 79.5
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.2e-35 150.2 88 79.5
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 1.1e-34 149.8 88 78.4
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.4e-34 149.4 99 71.7
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 1.4e-34 149.4 99 69.7
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 1.4e-34 149.4 88 77.3
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 1.4e-34 149.4 99 69.7
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 1.8e-34 149.1 100 69.0
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 2.4e-34 148.7 88 76.1
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 3.1e-34 148.3 99 70.7
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.1e-34 147.9 99 70.7
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.1e-34 147.9 99 70.7
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.3e-34 147.5 82 79.3
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 6.9e-34 147.1 99 71.7
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 6.9e-34 147.1 99 71.7
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 6.9e-34 147.1 99 71.7
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 9.1e-34 146.7 99 71.7
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 2.0e-33 145.6 99 69.7
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 2.6e-33 145.2 100 67.0
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 3.4e-33 144.8 98 68.4
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 4.5e-33 144.4 97 69.1
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 5.9e-33 144.1 88 72.7
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.7e-32 142.5 88 72.7
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 1.7e-32 142.5 88 72.7
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 3.8e-32 141.4 99 66.7
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 5.0e-32 141.0 88 70.5
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 8.5e-32 140.2 88 71.6
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 1.1e-31 139.8 88 75.0
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 1.1e-31 139.8 87 70.1
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 1.4e-31 139.4 87 70.1
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 1.4e-31 139.4 92 69.6
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 1.4e-31 139.4 88 72.7
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.9e-31 139.0 88 71.6
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 2.5e-31 138.7 96 66.7
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 3.2e-31 138.3 97 62.9
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 4.2e-31 137.9 99 64.6
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 7.2e-31 137.1 87 67.8
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.2e-30 136.3 87 67.8
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.2e-30 136.3 95 65.3
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 2.7e-30 135.2 87 67.8
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.4e-29 132.9 88 70.5
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 3.9e-29 131.3 99 65.7
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.1e-29 131.0 96 65.6
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 8.8e-29 130.2 88 65.9
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.1e-28 129.8 87 71.3
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.5e-28 129.4 91 65.9
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.5e-28 129.4 91 65.9
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 1.5e-25 119.4 80 68.8
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 2.0e-25 119.0 80 67.5
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.6e-25 118.6 86 59.3
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 3.8e-24 114.8 81 64.2
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 6.5e-24 114.0 106 51.9
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 6.5e-24 114.0 88 56.8
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 1.9e-23 112.5 100 53.0
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 7.2e-23 110.5 88 55.7
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 1.2e-22 109.8 96 54.2
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 4.0e-21 104.8 72 70.8
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.3e-19 99.8 107 48.6
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 7.0e-18 94.0 101 43.6
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.5e-17 91.7 91 48.4
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.5e-17 91.7 99 42.4
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 4.5e-17 91.3 97 47.4
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 5.0e-16 87.8 98 41.8
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 5.0e-16 87.8 98 43.9
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 6.5e-16 87.4 56 75.0
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 8.8e-13 77.0 55 63.6
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 1.2e-12 76.6 56 66.1
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.7e-11 72.8 99 30.3
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.7e-11 71.6 99 29.3
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.7e-11 71.6 99 29.3
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.1e-10 70.1 99 29.3
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.0e-08 61.2 43 62.8
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 9.4e-07 57.0 41 65.9


User provided reference genes

Program Settings