Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 2.8e-60 235.0 109 100.0
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.8e-41 171.4 93 84.9
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 8.5e-41 170.2 92 83.7
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.7e-39 165.2 93 83.9
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 1.5e-37 159.5 93 72.0
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 4.4e-37 157.9 93 76.3
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 7.5e-37 157.1 93 73.1
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 9.7e-37 156.8 93 76.3
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 1.7e-36 156.0 93 74.2
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 2.8e-36 155.2 93 74.2
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 3.7e-36 154.8 95 76.8
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 6.3e-36 154.1 93 74.2
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 6.3e-36 154.1 93 73.1
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 8.2e-36 153.7 93 72.0
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 8.2e-36 153.7 95 77.9
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 8.2e-36 153.7 93 73.1
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 1.4e-35 152.9 93 72.0
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.8e-35 152.5 93 72.0
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 2.4e-35 152.1 93 73.1
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.4e-35 152.1 93 73.1
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 2.4e-35 152.1 93 73.1
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 3.1e-35 151.8 93 71.0
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 4.1e-35 151.4 94 72.3
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 5.3e-35 151.0 93 71.0
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 7.0e-35 150.6 93 71.0
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 9.1e-35 150.2 93 73.1
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.2e-34 149.8 93 73.1
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 1.6e-34 149.4 93 68.8
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 2.0e-34 149.1 93 68.8
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 2.0e-34 149.1 93 68.8
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.0e-34 149.1 98 70.4
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.0e-34 149.1 98 70.4
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 2.7e-34 148.7 88 72.7
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 3.5e-34 148.3 92 71.7
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 5.9e-34 147.5 93 71.0
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 5.9e-34 147.5 93 69.9
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 7.7e-34 147.1 93 73.1
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 7.7e-34 147.1 93 69.9
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.0e-33 146.7 98 69.4
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.3e-33 146.4 98 69.4
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 1.3e-33 146.4 93 69.9
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.7e-33 146.0 93 68.8
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.2e-33 145.6 93 68.8
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 2.2e-33 145.6 93 68.8
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 2.2e-33 145.6 93 69.9
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 2.2e-33 145.6 93 71.0
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 3.8e-33 144.8 93 69.9
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.5e-33 143.7 93 68.8
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.5e-33 143.7 93 68.8
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 8.5e-33 143.7 87 72.4
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 3.2e-32 141.7 92 68.5
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 5.5e-32 141.0 105 63.8
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 7.2e-32 140.6 92 67.4
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 1.6e-31 139.4 93 68.8
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 2.1e-31 139.0 93 67.7
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 2.1e-31 139.0 93 64.5
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 3.0e-30 135.2 107 60.7
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 5.7e-29 131.0 93 59.1
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.4e-27 126.3 75 69.3
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.8e-27 125.9 93 59.1
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 1.6e-26 122.9 88 68.2
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 1.0e-25 120.2 93 58.1
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 2.3e-25 119.0 91 61.5
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.8e-19 99.4 82 56.1
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.0e-17 93.6 88 53.4
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 1.7e-17 92.8 63 66.7
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 8.6e-17 90.5 89 49.4
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.1e-16 90.1 81 53.1
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.9e-16 89.4 82 52.4
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 2.5e-16 89.0 81 53.1
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 9.5e-16 87.0 81 51.9
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.6e-15 86.3 81 49.4
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 8.0e-15 84.0 61 55.7
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 7.5e-13 77.4 92 41.3
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.7e-12 76.3 55 58.2
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.2e-10 70.1 91 39.6
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.5e-10 68.6 91 37.4
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 3.5e-10 68.6 91 37.4
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 6.2e-07 57.8 33 72.7


User provided reference genes

Program Settings