Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p036396 Quercus lobata HOM05D001119 ORTHO05D000862 6.4e-114 414.1 207 100.0
QL01p036392 Quercus lobata HOM05D001119 ORTHO05D000862 8.9e-39 164.5 286 39.2
QL01p036403 Quercus lobata HOM05D001119 ORTHO05D000862 6.0e-35 151.8 269 39.8
Haze_23947 Corylus avellana HOM05D006507 ORTHO05D007296 1.7e-26 123.6 252 34.1
Gorai.001G129200 Gossypium raimondii HOM05D001119 ORTHO05D000862 1.6e-24 117.1 256 32.4
Gohir.D07G120000 Gossypium hirsutum HOM05D001119 ORTHO05D000862 2.3e-23 113.2 256 32.0
Gohir.A07G115550 Gossypium hirsutum HOM05D001119 ORTHO05D000862 4.0e-23 112.5 256 31.2
Nn3g19892 Nelumbo nucifera HOM05D001119 ORTHO05D000862 2.4e-20 103.2 254 31.5
Nn3g19893 Nelumbo nucifera HOM05D001119 ORTHO05D000862 3.2e-20 102.8 254 31.1
Thecc.09G262600 Theobroma cacao HOM05D001119 ORTHO05D000862 2.7e-19 99.8 256 30.5
Nn2g14751 Nelumbo nucifera HOM05D001119 ORTHO05D000862 1.9e-17 93.6 258 30.2
Haze_26011 Corylus avellana HOM05D001119 ORTHO05D000862 3.3e-17 92.8 253 30.0
Atru.chr3.3728 Acer truncatum HOM05D001119 ORTHO05D000862 8.1e-16 88.2 239 30.5
Nn3g19895 Nelumbo nucifera HOM05D001119 ORTHO05D000862 2.4e-15 86.7 111 44.1
arahy.Tifrunner.gnm1.ann1.ASV59L Arachis hypogaea HOM05D001119 ORTHO05D000862 6.8e-15 85.1 253 26.5
GSVIVG01015084001 Vitis vinifera HOM05D001119 ORTHO05D000862 6.8e-15 85.1 274 27.7
Duzib187G1631 Durio zibethinus HOM05D001119 ORTHO05D000862 8.9e-15 84.7 269 29.0
Nn2g14752 Nelumbo nucifera HOM05D001119 ORTHO05D000862 1.2e-14 84.3 134 33.6
Prupe.3G138200 Prunus persica HOM05D001119 ORTHO05D000862 1.2e-14 84.3 231 33.3
Cfa002990 Carpinus fangiana HOM05D001119 ORTHO05D000862 2.0e-14 83.6 275 27.3
VMungo1215G2745 Vigna mungo HOM05D001119 ORTHO05D000862 9.9e-14 81.3 264 24.2
MELO3C015520.2 Cucumis melo HOM05D001119 ORTHO05D000862 2.2e-13 80.1 250 24.8
Thecc.09G077000 Theobroma cacao HOM05D001119 ORTHO05D000862 2.9e-13 79.7 277 27.8
Phvul.003G130800 Phaseolus vulgaris HOM05D001119 ORTHO05D000862 4.9e-13 79.0 272 23.9
TWI34G1834 Tripterygium wilfordii HOM05D001119 ORTHO05D000862 4.9e-13 79.0 271 25.5
Manes.16G095400 Manihot esculenta HOM05D001119 ORTHO05D000862 6.4e-13 78.6 264 26.1
Ciclev10029977m.g Citrus clementina HOM05D001119 ORTHO05D000862 1.1e-12 77.8 266 28.2
CiPaw.03G206700 Carya illinoinensis HOM05D001119 ORTHO05D000862 1.4e-12 77.4 270 27.0
Ciclev10030277m.g Citrus clementina HOM05D001119 ORTHO05D000862 1.4e-12 77.4 130 36.9
TAR633G1771 Trochodendron aralioides HOM05D001119 ORTHO05D000862 1.9e-12 77.0 128 35.9
Cpa.g.sc28.41 Carica papaya HOM05D001119 ORTHO05D000862 2.4e-12 76.6 291 23.7
CsaV3_1G041020 Cucumis sativus L. HOM05D001119 ORTHO05D000862 2.4e-12 76.6 252 25.4
TAR633G2176 Trochodendron aralioides HOM05D001119 ORTHO05D000862 2.4e-12 76.6 140 32.9
Actinidia30219 Actinidia chinensis HOM05D001119 ORTHO05D000862 7.1e-12 75.1 253 25.7
Sed0019806 Sechium edule HOM05D001119 ORTHO05D000862 7.1e-12 75.1 262 24.0
FAN15G0903 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.2e-11 74.3 264 27.7
CSS0035501 Camellia sinensis var. sinensis HOM05D001119 ORTHO05D000862 1.6e-11 73.9 259 26.3
Nn2g10643 Nelumbo nucifera HOM05D001119 ORTHO05D000862 1.6e-11 73.9 146 30.8
TAR383G0586 Trochodendron aralioides HOM05D001119 ORTHO05D000862 1.6e-11 73.9 152 31.6
FAN24G2291 Fragaria x ananassa HOM05D001119 ORTHO05D000862 2.1e-11 73.6 264 27.7
FvH4_2g11491 Fragaria vesca HOM05D001119 ORTHO05D000862 2.7e-11 73.2 264 27.7
Sc18g0002540 Simmondsia chinensis HOM05D001119 ORTHO05D000862 4.6e-11 72.4 254 26.4
ClCG03G015090 Citrullus lanatus HOM05D001119 ORTHO05D000862 6.0e-11 72.0 253 24.5
Duzib168G2357 Durio zibethinus HOM05D001119 ORTHO05D000862 6.0e-11 72.0 128 36.7
Gohir.D07G031700 Gossypium hirsutum HOM05D001119 ORTHO05D000862 1.3e-10 70.9 128 35.2
Gorai.001G033100 Gossypium raimondii HOM05D001119 ORTHO05D000862 1.3e-10 70.9 128 35.2
MD15G1217400 Malus domestica HOM05D001119 ORTHO05D000862 1.3e-10 70.9 272 24.3
PSO017G7248 Papaver somniferum HOM05D001119 ORTHO05D000862 1.3e-10 70.9 273 23.8
RcHm_v2.0_Chr6g0270221 Rosa chinensis HOM05D001119 ORTHO05D000862 1.3e-10 70.9 268 26.1
Gohir.A07G027700 Gossypium hirsutum HOM05D001119 ORTHO05D000862 2.3e-10 70.1 140 32.9
vmacro17201 Vaccinium macrocarpon HOM05D001119 ORTHO05D000862 5.1e-10 68.9 239 25.5
Ciclev10010600m.g Citrus clementina HOM05D001119 ORTHO05D000862 6.6e-10 68.6 270 24.1
Glyma.17G049300 Glycine max HOM05D001119 ORTHO05D000862 6.6e-10 68.6 265 23.0
Gorai.013G224400 Gossypium raimondii HOM05D001119 ORTHO05D000862 6.6e-10 68.6 279 26.5
Thecc.09G026700 Theobroma cacao HOM05D001119 ORTHO05D000862 6.6e-10 68.6 128 34.4
Gohir.D13G196380 Gossypium hirsutum HOM05D001119 ORTHO05D000862 8.7e-10 68.2 279 25.8
Prupe.7G199100 Prunus persica HOM05D001119 ORTHO05D000862 8.7e-10 68.2 266 23.3
Rhsim05G0007600 Rhododendron simsii HOM05D001119 ORTHO05D000862 8.7e-10 68.2 267 25.1
Ciclev10003740m.g Citrus clementina HOM05D001119 ORTHO05D000862 1.1e-09 67.8 258 25.2
Ciclev10033619m.g Citrus clementina HOM05D001119 ORTHO05D000862 1.1e-09 67.8 302 24.2
Medtr8g045370 Medicago truncatula HOM05D001119 ORTHO05D000862 1.1e-09 67.8 280 22.9
FAN23G2811 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.5e-09 67.4 258 23.6
Prupe.6G092000 Prunus persica HOM05D001119 ORTHO05D000862 1.5e-09 67.4 289 25.3
TPR.G12629 Trifolium pratense HOM05D001119 ORTHO05D000862 1.5e-09 67.4 276 22.8
FAN26G2421 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.9e-09 67.0 258 23.6
Medtr4g125340 Medicago truncatula HOM05D001119 ORTHO05D000862 1.9e-09 67.0 272 23.2
Medtr4g125350 Medicago truncatula HOM05D001119 ORTHO05D000862 2.5e-09 66.6 271 21.8
Atru.chr12.627 Acer truncatum HOM05D001119 ORTHO05D000862 3.3e-09 66.2 146 32.2
CANSAT56G3826 Cannabis sativa HOM05D001119 ORTHO05D000862 3.3e-09 66.2 289 23.9
GSVIVG01016349001 Vitis vinifera HOM05D001119 ORTHO05D000862 3.3e-09 66.2 129 34.9
Migut.L01565 Erythranthe guttata HOM05D001119 ORTHO05D000862 4.3e-09 65.9 270 25.6
Nitab4.5_0000447g0030 Nicotiana tabacum HOM05D001119 ORTHO05D000862 5.6e-09 65.5 118 33.9
Aqoxy4G03145 Aquilegia oxysepala HOM05D001119 ORTHO05D000862 7.3e-09 65.1 129 34.1
FvH4_1g08631 Fragaria vesca HOM05D001119 ORTHO05D000862 7.3e-09 65.1 258 24.4
Psat4g017600 Pisum sativum HOM05D001119 ORTHO05D000862 7.3e-09 65.1 286 21.0
COL.COLO4_18841 Corchorus olitorius HOM05D001119 ORTHO05D000862 1.2e-08 64.3 128 32.8
Nitab4.5_0000268g0010 Nicotiana tabacum HOM05D001119 ORTHO05D000862 1.2e-08 64.3 140 29.3
QL02p021952 Quercus lobata HOM05D001119 ORTHO05D000862 1.2e-08 64.3 143 32.2
Gohir.A13G190900 Gossypium hirsutum HOM05D001119 ORTHO05D000862 2.1e-08 63.5 279 25.1
RcHm_v2.0_Chr2g0094911 Rosa chinensis HOM05D001119 ORTHO05D000862 2.1e-08 63.5 264 23.1
Gohir.A13G021400 Gossypium hirsutum HOM05D001119 ORTHO05D000862 2.8e-08 63.2 261 26.1
PSO063G1671 Papaver somniferum HOM05D001119 ORTHO05D000862 2.8e-08 63.2 121 33.9
Potri.010G216400 Populus trichocarpa HOM05D001119 ORTHO05D000862 2.8e-08 63.2 126 31.0
Sabra10G0167500 Salix brachista HOM05D001119 ORTHO05D000862 2.8e-08 63.2 126 33.3
AUR62035057 Chenopodium quinoa HOM05D001119 ORTHO05D000862 4.7e-08 62.4 74 39.2
Sabra08G0031200 Salix brachista HOM05D001119 ORTHO05D000862 4.7e-08 62.4 129 34.1
PSO063G7393 Papaver somniferum HOM05D001119 ORTHO05D000862 6.2e-08 62.0 82 39.0
PSO515G0001 Papaver somniferum HOM05D001119 ORTHO05D000862 6.2e-08 62.0 121 33.1
CDE02G4634 Ceratophyllum demersum HOM05D001119 ORTHO05D000862 8.1e-08 61.6 247 22.7
Ciclev10030298m.g Citrus clementina HOM05D001119 ORTHO05D000862 8.1e-08 61.6 155 28.4
FAN19G1768 Fragaria x ananassa HOM05D001119 ORTHO05D000862 8.1e-08 61.6 258 24.0
Medtr8g045420 Medicago truncatula HOM05D001119 ORTHO05D000862 8.1e-08 61.6 281 21.0
PGR142G2693 Punica granatum HOM05D001119 ORTHO05D000862 8.1e-08 61.6 126 33.3
ATR0549G002 Amborella trichopoda HOM05D001119 ORTHO05D000862 1.1e-07 61.2 102 31.4
Aqoxy4G03180 Aquilegia oxysepala HOM05D001119 ORTHO05D000862 1.1e-07 61.2 128 33.6
ClCG08G013300 Citrullus lanatus HOM05D001119 ORTHO05D000862 1.1e-07 61.2 71 42.3
MD02G1091200 Malus domestica HOM05D001119 ORTHO05D000862 1.1e-07 61.2 112 33.9
Oeu042687.1 Olea europaea HOM05D001119 ORTHO05D000862 1.1e-07 61.2 125 33.6
PSO063G3146 Papaver somniferum HOM05D001119 ORTHO05D000862 1.1e-07 61.2 119 31.1
CSS0011228 Camellia sinensis var. sinensis HOM05D001119 ORTHO05D000862 1.4e-07 60.8 252 25.0
CDE08G0910 Ceratophyllum demersum HOM05D001119 ORTHO05D000862 1.4e-07 60.8 133 29.3
MELO3C011255.2 Cucumis melo HOM05D001119 ORTHO05D000862 1.4e-07 60.8 71 43.7
FAN01G1664 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.4e-07 60.8 276 23.2
A10p26510 Brassica napus HOM05D001119 ORTHO05D000862 1.8e-07 60.5 256 22.3
BraA10t44708Z Brassica rapa HOM05D001119 ORTHO05D000862 1.8e-07 60.5 256 22.3
Cpa.g.sc259.8 Carica papaya HOM05D001119 ORTHO05D000862 1.8e-07 60.5 138 29.7
Lalb_Chr23g0268591 Lupinus albus HOM05D001119 ORTHO05D000862 1.8e-07 60.5 128 33.6
PSO832G0176 Papaver somniferum HOM05D001119 ORTHO05D000862 1.8e-07 60.5 121 33.9
Aqoxy2G03246 Aquilegia oxysepala HOM05D001119 ORTHO05D000862 2.4e-07 60.1 123 29.3
CsaV3_2G032020 Cucumis sativus L. HOM05D001119 ORTHO05D000862 2.4e-07 60.1 86 40.7
PSO515G0002 Papaver somniferum HOM05D001119 ORTHO05D000862 2.4e-07 60.1 120 32.5
Peaxi162Scf00127g00193 Petunia axillaris HOM05D001119 ORTHO05D000862 2.4e-07 60.1 123 31.7
AL2G19300 Arabidopsis lyrata HOM05D001119 ORTHO05D000862 3.1e-07 59.7 129 34.9
Cpa.g.sc259.9 Carica papaya HOM05D001119 ORTHO05D000862 3.1e-07 59.7 138 29.7
Thhalv10012183m.g Eutrema salsugineum HOM05D001119 ORTHO05D000862 3.1e-07 59.7 134 28.4
Peaxi162Scf00073g00122 Petunia axillaris HOM05D001119 ORTHO05D000862 3.1e-07 59.7 124 29.8
AUR62016112 Chenopodium quinoa HOM05D001119 ORTHO05D000862 4.0e-07 59.3 71 39.4
COL.COLO4_18099 Corchorus olitorius HOM05D001119 ORTHO05D000862 4.0e-07 59.3 64 46.9
FAN26G0450 Fragaria x ananassa HOM05D001119 ORTHO05D000862 4.0e-07 59.3 258 24.0
Atru.chr7.2408 Acer truncatum HOM05D001119 ORTHO05D000862 5.3e-07 58.9 71 43.7
AT1G64870 Arabidopsis thaliana HOM05D001119 ORTHO05D000862 5.3e-07 58.9 140 30.7
PSO339G3271 Papaver somniferum HOM05D001119 ORTHO05D000862 5.3e-07 58.9 69 43.5
Potri.008G045000 Populus trichocarpa HOM05D001119 ORTHO05D000862 5.3e-07 58.9 128 30.5
TWI38G1075 Tripterygium wilfordii HOM05D001119 ORTHO05D000862 5.3e-07 58.9 148 30.4
arahy.Tifrunner.gnm1.ann1.H0EMIN Arachis hypogaea HOM05D001119 ORTHO05D000862 6.9e-07 58.5 120 30.8
Dinv42392 Davidia involucrata HOM05D001119 ORTHO05D000862 6.9e-07 58.5 64 46.9
PSO384G0338 Papaver somniferum HOM05D001119 ORTHO05D000862 6.9e-07 58.5 69 42.0
PSO538G0002 Papaver somniferum HOM05D001119 ORTHO05D000862 6.9e-07 58.5 79 41.8
PSO538G0004 Papaver somniferum HOM05D001119 ORTHO05D000862 6.9e-07 58.5 79 41.8
Sp7g06000 Schrenkiella parvula HOM05D001119 ORTHO05D000862 6.9e-07 58.5 143 28.0
CARHR039280 Cardamine hirsuta HOM05D001119 ORTHO05D000862 9.0e-07 58.2 119 29.4
CsaV3_5G026010 Cucumis sativus L. HOM05D001119 ORTHO05D000862 9.0e-07 58.2 300 21.7
Dinv30150 Davidia involucrata HOM05D001119 ORTHO05D000862 9.0e-07 58.2 142 30.3
MBI11_g20526_MAGBIO Magnolia biondii HOM05D001119 ORTHO05D000862 9.0e-07 58.2 110 30.0
Actinidia22353 Actinidia chinensis HOM05D001119 ORTHO05D000862 1.2e-06 57.8 121 33.1
EL10Ac3g05803 Beta vulgaris HOM05D001119 ORTHO05D000862 1.2e-06 57.8 79 36.7
A06p03920 Brassica napus HOM05D001119 ORTHO05D000862 1.2e-06 57.8 133 28.6
BraA06t23600Z Brassica rapa HOM05D001119 ORTHO05D000862 1.2e-06 57.8 133 28.6
MBI04_g34407_MAGBIO Magnolia biondii HOM05D001119 ORTHO05D000862 1.2e-06 57.8 70 37.1
Manes.10G041300 Manihot esculenta HOM05D001119 ORTHO05D000862 1.2e-06 57.8 72 43.1
SHI04807 Sapria himalayana HOM05D001119 ORTHO05D000862 1.2e-06 57.8 68 39.7
CARHR184010 Cardamine hirsuta HOM05D001119 ORTHO05D000862 1.5e-06 57.4 117 25.6
FAN28G0016 Fragaria x ananassa HOM05D001119 ORTHO05D000862 1.5e-06 57.4 248 23.4
Oeu051988.1 Olea europaea HOM05D001119 ORTHO05D000862 1.5e-06 57.4 272 21.7
QL11p000739 Quercus lobata HOM05D001119 ORTHO05D000862 1.5e-06 57.4 64 43.8
AT3G45200 Arabidopsis thaliana HOM05D001119 ORTHO05D000862 2.0e-06 57.0 147 25.9
BolC6t35531H Brassica oleracea HOM05D001119 ORTHO05D000862 2.0e-06 57.0 133 28.6
Thhalv10005652m.g Eutrema salsugineum HOM05D001119 ORTHO05D000862 2.0e-06 57.0 140 30.0
C06p03980 Brassica napus HOM05D001119 ORTHO05D000862 2.6e-06 56.6 133 28.6
Glyma.13G110400 Glycine max HOM05D001119 ORTHO05D000862 2.6e-06 56.6 128 26.6
Manes.16G121000 Manihot esculenta HOM05D001119 ORTHO05D000862 2.6e-06 56.6 71 42.3
Nitab4.5_0003582g0040 Nicotiana tabacum HOM05D001119 ORTHO05D000862 2.6e-06 56.6 114 30.7
ATR0375G001 Amborella trichopoda HOM05D001119 ORTHO05D000862 3.4e-06 56.2 71 35.2
Carub.0006s1178 Capsella rubella HOM05D001119 ORTHO05D000862 3.4e-06 56.2 121 30.6
FvH4_7g20311 Fragaria vesca HOM05D001119 ORTHO05D000862 3.4e-06 56.2 115 28.7
FAN06G2550 Fragaria x ananassa HOM05D001119 ORTHO05D000862 3.4e-06 56.2 115 28.7
Lj4C912T8 Lonicera japonica HOM05D001119 ORTHO05D000862 3.4e-06 56.2 103 34.0
Nitab4.5_0000061g0300 Nicotiana tabacum HOM05D001119 ORTHO05D000862 3.4e-06 56.2 114 30.7
Thecc.09G077100 Theobroma cacao HOM05D001119 ORTHO05D000862 3.4e-06 56.2 65 44.6
vmacro17200 Vaccinium macrocarpon HOM05D001119 ORTHO05D000862 3.4e-06 56.2 270 22.2
Cfa013160 Carpinus fangiana HOM05D001119 ORTHO05D000862 4.4e-06 55.8 116 31.0
CiPaw.07G222000 Carya illinoinensis HOM05D001119 ORTHO05D000862 4.4e-06 55.8 71 38.0
FAN06G4087 Fragaria x ananassa HOM05D001119 ORTHO05D000862 4.4e-06 55.8 282 23.0
ClCG09G020410 Citrullus lanatus HOM05D001119 ORTHO05D000862 5.8e-06 55.5 307 22.1
Glyma.02G161566 Glycine max HOM05D001119 ORTHO05D000862 5.8e-06 55.5 159 32.7
Sabra06G0197600 Salix brachista HOM05D001119 ORTHO05D000862 5.8e-06 55.5 71 39.4
AT1G49290 Arabidopsis thaliana HOM05D001119 ORTHO05D000862 7.6e-06 55.1 132 28.8
BcaB07g33684 Brassica carinata HOM05D001119 ORTHO05D000862 7.6e-06 55.1 133 28.6
Duzib150G1609 Durio zibethinus HOM05D001119 ORTHO05D000862 7.6e-06 55.1 64 43.8
SGA_v2.0_scaffold308G48075 Striga asiatica HOM05D001119 ORTHO05D000862 7.6e-06 55.1 71 39.4
ATR0691G254 Amborella trichopoda HOM05D046824 ORTHO05D000862 9.9e-06 54.7 79 34.2
AL1G56150 Arabidopsis lyrata HOM05D001119 ORTHO05D000862 9.9e-06 54.7 163 30.7
AL1G56240 Arabidopsis lyrata HOM05D001119 ORTHO05D000862 9.9e-06 54.7 163 30.7
AL6G21840 Arabidopsis lyrata HOM05D001119 ORTHO05D000862 9.9e-06 54.7 151 29.1
Cc09_g02590 Coffea canephora HOM05D001119 ORTHO05D000862 9.9e-06 54.7 129 31.0
Dinv31363 Davidia involucrata HOM05D001119 ORTHO05D000862 9.9e-06 54.7 205 25.9
MD11G1122600 Malus domestica HOM05D001119 ORTHO05D000862 9.9e-06 54.7 72 43.1
Potri.006G252800 Populus trichocarpa HOM05D001119 ORTHO05D000862 9.9e-06 54.7 74 35.1
Sed0006454 Sechium edule HOM05D001119 ORTHO05D000862 9.9e-06 54.7 284 21.5


User provided reference genes

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