Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p035454 Quercus lobata HOM05D008454 ORTHO05D010339 9.9e-86 320.1 163 100.0
Cfa011401 Carpinus fangiana HOM05D008454 ORTHO05D010339 1.1e-23 114.0 153 51.6
CiPaw.13G103800 Carya illinoinensis HOM05D008454 ORTHO05D010339 1.4e-23 113.6 152 50.0
Haze_23972 Corylus avellana HOM05D008454 ORTHO05D010339 2.8e-19 99.4 154 49.4
Dinv06346 Davidia involucrata HOM05D008454 ORTHO05D010339 1.8e-18 96.7 100 57.0
Actinidia00800 Actinidia chinensis HOM05D008454 ORTHO05D010339 5.8e-17 91.7 151 43.0
Prupe.6G090000 Prunus persica HOM05D008454 ORTHO05D010339 2.2e-16 89.7 150 44.7
MD11G1119900 Malus domestica HOM05D008454 ORTHO05D010339 6.4e-16 88.2 81 58.0
Thecc.09G334800 Theobroma cacao HOM05D008454 ORTHO05D010339 5.4e-15 85.1 87 56.3
arahy.Tifrunner.gnm1.ann1.06S5B0 Arachis hypogaea HOM05D008454 ORTHO05D010339 1.2e-14 84.0 150 44.0
arahy.Tifrunner.gnm1.ann1.DB83L5 Arachis hypogaea HOM05D008454 ORTHO05D010339 1.2e-14 84.0 150 44.0
Psat7g221640 Pisum sativum HOM05D008454 ORTHO05D010339 4.6e-14 82.0 143 38.5
Medtr4g061580 Medicago truncatula HOM05D008454 ORTHO05D010339 3.9e-13 79.0 142 36.6
TWI31G0064 Tripterygium wilfordii HOM05D008454 ORTHO05D010339 3.9e-13 79.0 85 48.2
COL.COLO4_18399 Corchorus olitorius HOM05D008454 ORTHO05D010339 6.6e-13 78.2 88 53.4
Hma1.2p1_0861F.1_g229610 Hydrangea macrophylla HOM05D008454 ORTHO05D010339 8.6e-13 77.8 139 35.3
Duzib168G1836 Durio zibethinus HOM05D008454 ORTHO05D010339 1.1e-12 77.4 75 54.7
Glyma.11G147735 Glycine max HOM05D008454 ORTHO05D010339 1.1e-12 77.4 150 43.3
Lj3g0021113 Lotus japonicus HOM05D008454 ORTHO05D010339 1.5e-12 77.0 149 40.9
Ca_19220_v3 Cicer arietinum L. HOM05D000134 ORTHO05D002886 1.9e-12 76.6 129 38.8
Cpa.g.sc139.21 Carica papaya HOM05D008454 ORTHO05D010339 7.3e-12 74.7 87 48.3
Potri.009G093700 Populus trichocarpa HOM05D008454 ORTHO05D010339 9.5e-12 74.3 148 37.8
RcHm_v2.0_Chr5g0061801 Rosa chinensis HOM05D017620 ORTHO05D010339 2.8e-11 72.8 86 44.2
Gorai.001G105700 Gossypium raimondii HOM05D008454 ORTHO05D010339 3.6e-11 72.4 78 48.7
Gohir.A07G093700 Gossypium hirsutum HOM05D008454 ORTHO05D010339 4.7e-11 72.0 78 48.7
Gohir.D07G098350 Gossypium hirsutum HOM05D008454 ORTHO05D010339 6.2e-11 71.6 73 50.7
VMungo1127G1552 Vigna mungo HOM05D008454 ORTHO05D010339 2.3e-10 69.7 145 39.3
FAN21G2608 Fragaria x ananassa HOM05D017620 ORTHO05D010339 3.1e-10 69.3 114 33.3
Atru.chr3.3753 Acer truncatum HOM05D008454 ORTHO05D010339 4.0e-10 68.9 96 46.9
FAN16G2582 Fragaria x ananassa HOM05D017620 ORTHO05D010339 1.5e-09 67.0 113 34.5
TPR.G2967 Trifolium pratense HOM05D008454 ORTHO05D010339 2.6e-09 66.2 143 34.3
Phvul.011G070400 Phaseolus vulgaris HOM05D008454 ORTHO05D010339 9.8e-09 64.3 151 39.7
Sc12g0000230 Simmondsia chinensis HOM05D008454 ORTHO05D010339 4.9e-08 62.0 88 46.6
Sed0002130 Sechium edule HOM05D029394 ORTHO05D010339 1.1e-07 60.8 156 35.9
AUR62036241 Chenopodium quinoa HOM05D008454 ORTHO05D010339 2.4e-07 59.7 76 46.1
ClCG02G020710 Citrullus lanatus HOM05D029394 ORTHO05D010339 2.4e-07 59.7 163 32.5
THA.LOC104800629 Tarenaya hassleriana HOM05D008454 ORTHO05D010339 3.2e-07 59.3 76 46.1
Sp1g06540 Schrenkiella parvula HOM05D008454 ORTHO05D010339 9.2e-07 57.8 68 45.6
AT1G07860 Arabidopsis thaliana HOM05D008454 ORTHO05D010339 3.5e-06 55.8 78 43.6
AT1G07870 Arabidopsis thaliana HOM05D000134 ORTHO05D000168 3.5e-06 55.8 78 43.6
AL1G18140 Arabidopsis lyrata HOM05D008454 ORTHO05D010339 7.8e-06 54.7 96 39.6


User provided reference genes

Program Settings