Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 8.5e-98 360.9 271 100.0
CiPaw.14G074700 Carya illinoinensis HOM05D023024 ORTHO05D008438 5.2e-23 112.5 143 51.0
Haze_23978 Corylus avellana HOM05D023024 ORTHO05D008438 2.6e-22 110.2 182 46.2
Cfa011407 Carpinus fangiana HOM05D023024 ORTHO05D008438 2.9e-21 106.7 174 46.0
Haze_02139 Corylus avellana HOM05D023024 ORTHO05D008438 7.3e-17 92.0 100 57.0
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 2.8e-16 90.1 98 58.2
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 2.6e-14 83.6 167 43.1
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 1.9e-12 77.4 110 43.6
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 2.4e-12 77.0 162 38.9
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 2.4e-12 77.0 90 51.1
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 2.4e-12 77.0 131 42.7
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 9.3e-12 75.1 172 37.2
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 9.3e-12 75.1 177 35.6
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 9.3e-12 75.1 140 36.4
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 1.6e-11 74.3 181 36.5
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 2.7e-11 73.6 106 48.1
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 2.7e-11 73.6 146 38.4
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 3.5e-11 73.2 106 45.3
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 3.5e-11 73.2 106 45.3
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 6.0e-11 72.4 79 51.9
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 7.8e-11 72.0 126 38.9
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 7.8e-11 72.0 136 38.2
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 1.7e-10 70.9 105 43.8
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 2.3e-10 70.5 63 58.7
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 2.3e-10 70.5 99 44.4
MD03G1106700 Malus domestica HOM05D016629 ORTHO05D008438 2.3e-10 70.5 105 47.6
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 3.0e-10 70.1 65 53.8
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 3.9e-10 69.7 85 52.9
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 5.1e-10 69.3 67 55.2
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 8.7e-10 68.6 68 54.4
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 8.7e-10 68.6 92 43.5
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 1.1e-09 68.2 130 39.2
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 1.1e-09 68.2 65 56.9
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.5e-09 67.8 156 35.3
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 1.5e-09 67.8 117 39.3
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 1.9e-09 67.4 177 32.8
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 1.9e-09 67.4 76 50.0
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 2.5e-09 67.0 60 61.7
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 3.3e-09 66.6 95 43.2
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 4.3e-09 66.2 65 53.8
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 7.3e-09 65.5 92 44.6
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 9.6e-09 65.1 86 47.7
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 9.6e-09 65.1 105 42.9
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 9.6e-09 65.1 135 35.6
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 1.3e-08 64.7 60 58.3
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 1.3e-08 64.7 59 59.3
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 1.3e-08 64.7 59 59.3
C03p13110 Brassica napus HOM05D007431 ORTHO05D008438 1.3e-08 64.7 113 39.8
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 1.3e-08 64.7 59 59.3
Ca_13166_v3 Cicer arietinum L. HOM05D007431 ORTHO05D008438 1.3e-08 64.7 161 38.5
A03p11360 Brassica napus HOM05D007431 ORTHO05D008438 1.6e-08 64.3 104 42.3
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 1.6e-08 64.3 110 40.9
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 1.6e-08 64.3 146 32.9
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 2.1e-08 63.9 84 48.8
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 2.8e-08 63.5 95 43.2
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 2.8e-08 63.5 138 38.4
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 3.6e-08 63.2 73 52.1
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 3.6e-08 63.2 155 33.5
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 3.6e-08 63.2 60 56.7
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 3.6e-08 63.2 165 36.4
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 4.8e-08 62.8 146 35.6
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 4.8e-08 62.8 65 53.8
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 4.8e-08 62.8 87 47.1
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 4.8e-08 62.8 163 30.7
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 6.2e-08 62.4 85 44.7
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 6.2e-08 62.4 96 42.7
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 6.2e-08 62.4 165 35.2
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 8.1e-08 62.0 72 52.8
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 8.1e-08 62.0 68 52.9
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 8.1e-08 62.0 60 56.7
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 1.4e-07 61.2 86 45.3
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 1.4e-07 61.2 138 34.1
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 1.4e-07 61.2 116 39.7
Migut.E00592 Erythranthe guttata HOM05D007431 ORTHO05D008438 1.8e-07 60.8 69 49.3
Migut.E00657 Erythranthe guttata HOM05D007431 ORTHO05D008438 1.8e-07 60.8 69 49.3
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 1.8e-07 60.8 95 40.0
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 2.4e-07 60.5 114 36.8
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 2.4e-07 60.5 114 36.8
Sed0014169 Sechium edule HOM05D007431 ORTHO05D008438 2.4e-07 60.5 88 47.7
Lj5g0005730 Lotus japonicus HOM05D007431 ORTHO05D008438 3.1e-07 60.1 60 55.0
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 4.0e-07 59.7 79 46.8
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 4.0e-07 59.7 77 48.1
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 4.0e-07 59.7 93 45.2
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 9.0e-07 58.5 162 32.7
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 1.2e-06 58.2 121 34.7
PSO339G3784 Papaver somniferum HOM05D007431 ORTHO05D008438 2.0e-06 57.4 93 37.6
RcHm_v2.0_Chr5g0061881 Rosa chinensis HOM05D016629 ORTHO05D025349 2.0e-06 57.4 175 31.4
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 2.6e-06 57.0 60 51.7
Nitab4.5_0002380g0010 Nicotiana tabacum HOM05D015294 ORTHO05D018867 2.6e-06 57.0 107 38.3
PSO384G2622 Papaver somniferum HOM05D007431 ORTHO05D008438 2.6e-06 57.0 93 37.6
Manes.07G083300 Manihot esculenta HOM05D007431 ORTHO05D008438 3.4e-06 56.6 57 52.6
Potri.013G126701 Populus trichocarpa HOM05D007431 ORTHO05D008438 3.4e-06 56.6 90 40.0
Sabra13G0105800 Salix brachista HOM05D007431 ORTHO05D008438 3.4e-06 56.6 60 51.7
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 3.4e-06 56.6 153 33.3
TWI53G0129 Tripterygium wilfordii HOM05D007431 ORTHO05D008438 4.5e-06 56.2 98 42.9
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 5.8e-06 55.8 71 43.7


User provided reference genes

Program Settings