Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 7.3e-77 290.4 141 100.0
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 6.6e-70 267.3 141 90.8
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 6.9e-67 257.3 139 89.9
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 1.3e-65 253.1 141 86.5
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 9.3e-64 246.9 140 83.6
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 9.3e-64 246.9 140 83.6
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.2e-63 246.5 140 83.6
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 2.1e-63 245.7 140 84.3
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 6.0e-63 244.2 139 84.9
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 8.7e-62 240.4 139 84.9
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 8.7e-62 240.4 136 82.4
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.5e-61 239.6 136 86.8
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 1.9e-61 239.2 136 86.0
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 2.5e-61 238.8 138 81.9
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 3.3e-61 238.4 136 86.0
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 4.3e-61 238.0 139 82.7
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 5.6e-61 237.7 134 85.8
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 9.6e-61 236.9 141 80.9
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 9.6e-61 236.9 136 86.0
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 9.6e-61 236.9 136 86.0
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 9.6e-61 236.9 136 86.0
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 9.6e-61 236.9 136 86.0
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 9.6e-61 236.9 136 86.0
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 1.3e-60 236.5 140 81.4
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 1.6e-60 236.1 136 85.3
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.6e-60 236.1 137 79.6
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 2.1e-60 235.7 141 80.9
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 2.8e-60 235.3 139 82.7
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.8e-60 235.3 137 78.8
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 3.6e-60 235.0 136 85.3
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 8.1e-60 233.8 136 84.6
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 8.1e-60 233.8 141 81.6
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.1e-59 233.4 139 79.1
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.1e-59 233.4 136 84.6
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 1.8e-59 232.6 141 78.7
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 1.8e-59 232.6 136 82.4
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 2.4e-59 232.3 139 79.9
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 3.1e-59 231.9 140 77.1
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 3.1e-59 231.9 140 77.9
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 3.1e-59 231.9 140 77.9
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 3.1e-59 231.9 139 80.6
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 4.0e-59 231.5 142 77.5
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 6.9e-59 230.7 139 79.1
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 6.9e-59 230.7 135 80.0
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 9.0e-59 230.3 135 83.0
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 9.0e-59 230.3 142 77.5
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 9.0e-59 230.3 140 77.1
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 9.0e-59 230.3 135 80.7
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 1.2e-58 229.9 139 79.9
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 1.2e-58 229.9 134 79.9
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 2.0e-58 229.2 140 78.6
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 2.0e-58 229.2 137 78.8
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 2.6e-58 228.8 141 81.6
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 3.4e-58 228.4 137 84.7
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 3.4e-58 228.4 139 78.4
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 3.4e-58 228.4 142 78.2
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 3.4e-58 228.4 141 75.9
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 3.4e-58 228.4 139 77.7
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 4.5e-58 228.0 137 83.2
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 4.5e-58 228.0 136 80.1
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 5.8e-58 227.6 137 79.6
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 7.6e-58 227.3 134 81.3
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 9.9e-58 226.9 135 79.3
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 9.9e-58 226.9 137 79.6
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 1.3e-57 226.5 137 82.5
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 1.3e-57 226.5 137 82.5
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 1.7e-57 226.1 139 77.7
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.7e-57 226.1 142 76.8
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 3.8e-57 224.9 135 79.3
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 3.8e-57 224.9 142 77.5
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 4.9e-57 224.6 142 76.1
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.1e-56 223.4 142 75.4
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 4.2e-56 221.5 135 80.0
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 9.3e-56 220.3 135 79.3
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.2e-55 219.9 139 75.5
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.2e-55 219.9 142 74.6
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 1.6e-55 219.5 140 76.4
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 2.7e-55 218.8 141 73.8
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 2.7e-55 218.8 135 78.5
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 3.5e-55 218.4 138 76.8
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 3.5e-55 218.4 138 76.1
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 1.8e-54 216.1 135 78.5
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 3.0e-54 215.3 135 77.8
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 3.9e-54 214.9 135 77.0
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 6.7e-54 214.2 135 75.6
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 1.1e-53 213.4 140 72.1
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 1.9e-53 212.6 135 77.0
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.5e-53 212.2 135 75.6
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.3e-53 211.8 142 71.1
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 7.4e-53 210.7 131 76.3
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 3.6e-52 208.4 128 78.9
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 4.9e-49 198.0 141 72.3
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 4.2e-48 194.9 132 73.5
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 3.5e-47 191.8 142 66.2
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.5e-45 186.4 162 61.7
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 7.4e-45 184.1 114 80.7
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 1.1e-43 180.3 130 67.7
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 1.7e-41 172.9 136 64.0
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 2.2e-41 172.6 140 65.7
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 1.6e-39 166.4 127 64.6
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 3.5e-39 165.2 94 84.0
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 3.5e-39 165.2 132 57.6
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 3.0e-38 162.2 131 65.6
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 8.7e-38 160.6 157 58.0
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 1.6e-36 156.4 139 60.4
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 2.8e-36 155.6 101 75.2
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 3.7e-36 155.2 99 71.7
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.7e-36 155.2 140 61.4
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 8.2e-36 154.1 102 73.5
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 1.8e-35 152.9 96 76.0
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 5.0e-33 144.8 99 68.7
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 3.2e-32 142.1 136 57.4
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 5.5e-24 114.8 139 48.2
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 8.8e-22 107.5 140 46.4
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 4.4e-21 105.1 132 43.9
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 5.7e-21 104.8 96 56.2
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.8e-19 99.8 96 52.1
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 1.2e-18 97.1 60 75.0
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 1.5e-18 96.7 62 71.0
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 1.3e-17 93.6 62 69.4
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 3.8e-17 92.0 118 41.5
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 9.4e-16 87.4 126 38.9
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 1.8e-14 83.2 44 88.6
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 3.0e-14 82.4 45 84.4
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 1.1e-08 63.9 37 78.4
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.9e-08 63.2 33 84.8
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 4.2e-08 62.0 41 78.0
SEGI_40910 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 6.7e-06 54.7 51 49.0


User provided reference genes

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