Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 4.3e-68 261.2 128 100.0
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 2.5e-60 235.3 132 87.1
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 9.6e-60 233.4 131 85.5
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 2.8e-59 231.9 128 85.2
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 3.7e-59 231.5 128 85.9
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 8.1e-59 230.3 133 84.2
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 2.4e-58 228.8 128 82.8
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 4.0e-58 228.0 128 84.4
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 6.9e-58 227.3 129 86.0
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 1.2e-57 226.5 131 82.4
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 1.5e-57 226.1 130 83.1
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 1.5e-57 226.1 130 83.1
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 1.5e-57 226.1 130 83.1
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.4e-57 224.9 128 85.9
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 4.5e-57 224.6 128 84.4
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 4.5e-57 224.6 128 82.8
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 4.5e-57 224.6 128 80.5
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 5.8e-57 224.2 130 83.8
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 5.8e-57 224.2 129 82.9
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 7.6e-57 223.8 129 82.9
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.0e-56 223.4 129 82.2
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.3e-56 223.0 129 81.4
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.7e-56 222.6 130 82.3
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 1.7e-56 222.6 129 82.9
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 2.2e-56 222.2 132 82.6
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 2.2e-56 222.2 133 82.0
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 2.2e-56 222.2 128 78.1
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 4.9e-56 221.1 130 79.2
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 6.5e-56 220.7 128 80.5
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 6.5e-56 220.7 130 80.8
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 8.4e-56 220.3 130 81.5
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.1e-55 219.9 129 82.2
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.1e-55 219.9 129 82.2
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 1.9e-55 219.2 128 81.2
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.5e-55 218.8 129 81.4
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.2e-55 218.4 128 79.7
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 4.2e-55 218.0 133 78.2
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 4.2e-55 218.0 128 79.7
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 5.5e-55 217.6 129 80.6
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.5e-55 217.6 129 82.2
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 5.5e-55 217.6 130 77.7
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 5.5e-55 217.6 118 86.4
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 7.1e-55 217.2 128 80.5
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 7.1e-55 217.2 128 81.2
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 7.1e-55 217.2 129 81.4
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 7.1e-55 217.2 126 81.0
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 9.3e-55 216.9 131 80.2
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.2e-54 216.5 129 80.6
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 1.2e-54 216.5 128 81.2
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 1.2e-54 216.5 128 78.9
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 1.2e-54 216.5 128 79.7
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 1.2e-54 216.5 129 80.6
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 1.2e-54 216.5 129 80.6
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.6e-54 216.1 129 79.8
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 1.6e-54 216.1 128 80.5
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 1.6e-54 216.1 128 82.0
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 1.6e-54 216.1 132 78.8
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 1.6e-54 216.1 129 80.6
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.6e-54 216.1 129 80.6
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.6e-54 216.1 129 79.8
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.1e-54 215.7 129 81.4
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.7e-54 215.3 129 79.8
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 2.7e-54 215.3 128 78.1
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.5e-54 214.9 127 80.3
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 3.5e-54 214.9 129 78.3
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 4.6e-54 214.5 130 81.5
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 6.0e-54 214.2 128 78.1
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 6.0e-54 214.2 128 79.7
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 6.0e-54 214.2 128 79.7
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 6.0e-54 214.2 128 80.5
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 7.9e-54 213.8 130 79.2
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 7.9e-54 213.8 128 80.5
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 1.0e-53 213.4 128 81.2
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 1.3e-53 213.0 128 80.5
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 2.3e-53 212.2 128 77.3
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 2.3e-53 212.2 133 78.2
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 2.3e-53 212.2 128 77.3
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 3.0e-53 211.8 128 77.3
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 3.9e-53 211.5 128 79.7
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 6.7e-53 210.7 131 78.6
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 6.7e-53 210.7 132 79.5
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 8.7e-53 210.3 128 77.3
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 1.1e-52 209.9 128 77.3
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 1.5e-52 209.5 128 77.3
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.9e-52 209.1 131 76.3
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.3e-52 208.4 128 78.1
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 9.6e-52 206.8 130 76.9
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 1.3e-51 206.5 128 74.2
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 1.3e-51 206.5 128 80.5
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.6e-51 206.1 128 77.3
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 2.1e-51 205.7 127 78.0
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 3.7e-51 204.9 131 76.3
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 4.8e-51 204.5 121 80.2
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 4.8e-51 204.5 144 74.3
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 8.2e-51 203.8 132 72.7
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 8.2e-51 203.8 128 75.8
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 1.4e-50 203.0 128 75.8
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.4e-50 203.0 128 76.6
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 4.1e-50 201.4 132 72.7
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.2e-49 199.9 116 81.9
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 2.0e-49 199.1 128 73.4
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.0e-49 199.1 128 74.2
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 2.6e-49 198.7 132 72.0
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 3.4e-49 198.4 132 70.5
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 3.4e-49 198.4 128 71.9
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 5.8e-49 197.6 136 75.0
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 5.8e-49 197.6 133 70.7
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 5.8e-49 197.6 132 71.2
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 7.6e-49 197.2 132 72.0
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 1.0e-48 196.8 133 70.7
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 1.0e-48 196.8 132 71.2
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.0e-48 196.8 128 75.8
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 1.3e-48 196.4 132 71.2
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 1.7e-48 196.1 116 80.2
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 2.2e-48 195.7 129 73.6
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 2.9e-48 195.3 129 73.6
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 5.0e-48 194.5 132 70.5
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 5.0e-48 194.5 132 69.7
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 5.0e-48 194.5 133 69.9
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 5.0e-48 194.5 132 69.7
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 5.0e-48 194.5 133 69.9
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 6.5e-48 194.1 133 69.9
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 6.5e-48 194.1 133 69.9
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 6.5e-48 194.1 133 69.9
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 8.4e-48 193.7 132 69.7
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 1.4e-47 193.0 121 77.7
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 1.9e-47 192.6 129 72.1
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 2.5e-47 192.2 128 68.8
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.2e-47 191.8 131 69.5
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 5.5e-47 191.0 132 70.5
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 1.2e-46 189.9 127 70.9
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 1.6e-46 189.5 124 72.6
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 2.1e-46 189.1 128 67.2
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 3.5e-46 188.3 127 70.1
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 4.6e-46 188.0 129 69.0
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 6.1e-46 187.6 117 72.6
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 3.9e-45 184.9 119 69.7
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 5.1e-45 184.5 119 69.7
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 1.5e-44 183.0 126 72.2
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 1.3e-43 179.9 126 70.6
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 2.8e-43 178.7 121 70.2
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 1.8e-42 176.0 138 65.2
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 5.9e-41 171.0 117 70.1
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 7.7e-41 170.6 116 65.5
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 5.0e-40 167.9 115 66.1
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 9.4e-39 163.7 103 68.0
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 3.9e-37 158.3 112 67.0
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 5.1e-37 157.9 90 80.0
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 1.4e-34 149.8 103 68.0
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 2.9e-32 142.1 75 88.0
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 3.2e-31 138.7 115 53.9
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 2.0e-28 129.4 77 77.9
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 4.4e-28 128.3 72 83.3
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 7.4e-28 127.5 84 76.2
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 7.7e-25 117.5 73 75.3
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 6.5e-24 114.4 74 71.6
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.9e-23 112.8 76 68.4
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 5.2e-21 104.8 72 66.7
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.7e-19 98.6 59 79.7
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 3.1e-18 95.5 55 80.0
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 5.2e-13 78.2 50 70.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 3.4e-12 75.5 61 59.0
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 2.4e-10 69.3 95 33.7
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 3.2e-07 58.9 43 60.5


User provided reference genes

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