Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 5.3e-82 307.8 168 100.0
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 7.2e-55 217.6 170 75.9
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 5.7e-52 208.0 168 73.8
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 1.2e-49 200.3 170 71.2
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 1.3e-40 170.2 167 61.7
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 9.4e-39 164.1 173 57.2
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 8.0e-38 161.0 173 54.9
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.4e-37 160.2 173 57.2
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 1.4e-37 160.2 173 60.1
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.8e-37 159.8 173 57.2
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.5e-36 156.8 173 54.3
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 7.5e-36 154.5 169 55.0
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 7.5e-36 154.5 169 55.0
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.2e-35 152.9 170 57.6
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 4.5e-33 145.2 174 55.7
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 4.5e-33 145.2 174 55.7
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 4.5e-33 145.2 174 55.7
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 7.7e-33 144.4 173 56.6
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 7.7e-33 144.4 164 55.5
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 1.3e-32 143.7 167 53.9
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 2.2e-32 142.9 139 65.5
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 4.7e-30 135.2 161 58.4
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 2.3e-29 132.9 174 51.1
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 2.3e-29 132.9 151 53.6
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 2.3e-29 132.9 164 58.5
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 5.2e-29 131.7 171 53.8
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 8.8e-29 131.0 168 55.4
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 2.0e-28 129.8 168 51.8
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 5.7e-28 128.3 167 55.1
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 7.5e-28 127.9 170 54.7
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 7.5e-28 127.9 170 50.0
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 7.5e-28 127.9 184 49.5
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 2.2e-27 126.3 158 50.0
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 6.3e-27 124.8 162 52.5
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 6.3e-27 124.8 168 52.4
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 3.1e-26 122.5 162 53.1
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 4.1e-26 122.1 151 55.6
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 4.1e-26 122.1 172 51.2
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 7.0e-26 121.3 175 49.7
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 1.2e-25 120.6 110 66.4
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 1.2e-25 120.6 167 53.9
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 2.0e-25 119.8 167 51.5
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.7e-25 119.4 103 69.9
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 3.5e-25 119.0 175 49.1
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 3.5e-25 119.0 168 48.2
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 1.3e-24 117.1 168 53.6
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 1.7e-24 116.7 173 48.6
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 2.2e-24 116.3 184 48.9
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 3.8e-24 115.5 106 65.1
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 5.0e-24 115.2 156 53.2
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 5.0e-24 115.2 162 48.1
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 6.5e-24 114.8 141 56.7
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 6.5e-24 114.8 174 49.4
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.5e-23 113.6 176 47.2
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 2.5e-23 112.8 178 47.2
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 3.2e-23 112.5 176 46.6
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 3.2e-23 112.5 177 48.0
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.2e-23 112.5 190 49.5
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 4.2e-23 112.1 144 50.7
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 4.2e-23 112.1 166 49.4
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 5.5e-23 111.7 181 49.2
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 9.4e-23 110.9 195 45.1
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 1.6e-22 110.2 167 47.9
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 2.1e-22 109.8 200 43.5
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 4.7e-22 108.6 168 47.0
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 4.7e-22 108.6 166 49.4
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 6.1e-22 108.2 166 50.0
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 8.0e-22 107.8 108 65.7
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 1.4e-21 107.1 162 49.4
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 1.8e-21 106.7 181 45.3
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 4.0e-21 105.5 170 50.0
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 1.2e-20 104.0 96 71.9
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 2.0e-20 103.2 167 49.1
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 3.4e-20 102.4 111 53.2
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 9.8e-20 100.9 157 47.8
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 2.8e-19 99.4 134 47.8
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 4.9e-19 98.6 176 44.3
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 6.3e-19 98.2 185 42.7
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 6.3e-19 98.2 118 55.1
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 6.3e-19 98.2 167 44.9
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 6.3e-19 98.2 167 44.9
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 8.3e-19 97.8 144 47.9
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 8.3e-19 97.8 151 46.4
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.1e-18 97.4 174 46.6
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 3.1e-18 95.9 171 46.2
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 9.2e-18 94.4 154 50.6
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.3e-16 90.5 115 52.2
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 2.3e-16 89.7 166 43.4
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 8.6e-16 87.8 132 45.5
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 1.1e-15 87.4 173 42.2
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 1.9e-15 86.7 99 57.6
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 2.5e-15 86.3 166 41.6
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 3.3e-15 85.9 170 41.2
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 9.5e-15 84.3 141 42.6
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 2.1e-14 83.2 150 44.0
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 6.1e-14 81.6 154 39.6
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 8.0e-14 81.3 139 41.0
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 2.3e-13 79.7 169 39.6
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 2.9e-11 72.8 119 52.1
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 3.7e-11 72.4 120 49.2
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 1.2e-09 67.4 72 54.2
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 5.0e-08 62.0 173 35.3
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 2.8e-06 56.2 182 33.5
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 3.6e-06 55.8 49 59.2
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 3.6e-06 55.8 49 59.2
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 3.6e-06 55.8 49 59.2


User provided reference genes

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