Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 4.7e-176 621.3 368 100.0
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 1.0e-90 337.8 376 61.7
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 5.2e-90 335.5 389 58.6
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 2.6e-89 333.2 401 51.9
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 2.9e-85 319.7 367 53.1
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 1.2e-83 314.3 361 54.3
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 1.6e-83 313.9 373 50.9
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 6.8e-82 308.5 367 54.8
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 2.8e-80 303.1 387 51.9
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 1.2e-78 297.7 339 53.4
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 5.9e-78 295.4 374 50.0
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 3.3e-76 289.7 355 50.7
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 2.8e-75 286.6 341 56.0
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 2.8e-75 286.6 334 52.7
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 1.1e-71 274.6 365 49.3
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 9.2e-71 271.6 359 48.2
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 1.1e-68 264.6 350 50.9
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 3.3e-68 263.1 373 49.9
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 4.3e-68 262.7 339 48.1
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 9.5e-68 261.5 388 47.9
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 8.0e-67 258.5 452 42.0
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 1.0e-66 258.1 396 44.7
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 1.8e-66 257.3 379 48.3
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 2.0e-65 253.8 375 45.3
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 7.5e-65 251.9 473 40.2
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 9.8e-65 251.5 409 42.3
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 3.7e-64 249.6 448 41.7
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 4.9e-64 249.2 358 48.6
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 2.4e-63 246.9 441 44.9
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 3.5e-62 243.0 345 46.7
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 1.0e-61 241.5 345 48.7
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 2.5e-60 236.9 482 41.7
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 1.2e-59 234.6 377 46.9
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 2.1e-59 233.8 407 44.5
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 2.8e-59 233.4 337 46.6
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 2.8e-59 233.4 340 48.8
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 4.7e-59 232.6 346 48.0
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 6.2e-59 232.3 427 44.5
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 9.8e-57 224.9 360 47.5
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 2.2e-56 223.8 437 38.4
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 3.7e-56 223.0 435 45.5
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 1.1e-55 221.5 479 36.7
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 1.1e-55 221.5 310 47.7
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 1.2e-54 218.0 348 45.1
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 4.6e-54 216.1 395 40.5
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 6.0e-54 215.7 391 43.2
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 3.9e-53 213.0 418 41.1
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 4.3e-52 209.5 406 42.9
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 1.2e-51 208.0 541 37.5
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 3.6e-51 206.5 445 46.5
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 4.7e-51 206.1 444 42.8
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 4.0e-50 203.0 479 39.0
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 5.2e-50 202.6 398 39.2
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 9.9e-49 198.4 342 43.0
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 2.9e-48 196.8 341 42.5
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 1.1e-47 194.9 443 37.7
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 2.4e-47 193.7 272 46.3
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 1.7e-45 187.6 371 39.4
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 2.3e-45 187.2 423 36.2
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 3.0e-45 186.8 591 32.7
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 5.1e-45 186.0 379 39.3
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 4.3e-44 183.0 393 39.4
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 9.5e-44 181.8 474 39.5
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 6.2e-43 179.1 305 41.0
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 4.0e-42 176.4 438 35.2
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 4.0e-42 176.4 384 37.8
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 7.6e-41 172.2 466 40.3
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 1.7e-40 171.0 242 50.8
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 8.4e-40 168.7 473 38.9
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 3.2e-39 166.8 433 32.6
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 2.7e-38 163.7 420 35.2
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 6.0e-38 162.5 427 33.3
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 6.0e-38 162.5 427 33.7
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 2.3e-37 160.6 591 30.8
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 3.0e-37 160.2 338 37.9
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 3.9e-37 159.8 364 36.8
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 3.9e-37 159.8 346 37.3
Dinv42987 Davidia involucrata HOM05D006297 ORTHO05D007873 1.9e-36 157.5 368 37.5
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 9.6e-36 155.2 403 34.0
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 2.1e-35 154.1 310 39.4
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 3.6e-35 153.3 431 32.5
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 6.2e-35 152.5 434 33.6
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.1e-34 151.8 564 31.7
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 1.8e-34 151.0 384 34.6
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 4.0e-34 149.8 384 34.6
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 4.0e-34 149.8 384 34.6
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 1.2e-33 148.3 439 31.9
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 1.2e-33 148.3 426 33.1
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 2.0e-33 147.5 280 41.8
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 2.0e-33 147.5 446 33.0
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 4.4e-33 146.4 365 36.2
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.7e-32 144.4 306 38.9
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 2.2e-32 144.1 444 33.1
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 2.9e-32 143.7 441 31.1
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 2.9e-32 143.7 370 36.8
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 8.4e-32 142.1 306 40.5
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 4.2e-31 139.8 371 35.0
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 9.3e-31 138.7 586 30.0
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 2.1e-30 137.5 169 55.0
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 2.7e-30 137.1 588 29.8
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 3.5e-30 136.7 469 29.2
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 4.6e-30 136.3 445 33.5
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 6.6e-29 132.5 369 34.1
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 6.6e-29 132.5 120 62.5
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 6.6e-29 132.5 120 62.5
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 1.1e-28 131.7 376 34.6
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 1.6e-27 127.9 179 49.2
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 6.2e-27 125.9 342 33.3
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 1.1e-26 125.2 453 31.3
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 1.4e-26 124.8 375 32.0
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 3.1e-26 123.6 447 29.3
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 3.4e-25 120.2 449 28.7
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 7.6e-25 119.0 171 48.0
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 2.2e-24 117.5 266 36.8
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 6.4e-24 115.9 296 37.5
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 1.9e-23 114.4 116 62.9
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 6.7e-21 105.9 327 31.8
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 1.5e-20 104.8 386 30.8
Dinv17043 Davidia involucrata HOM05D006297 ORTHO05D007873 4.3e-20 103.2 131 51.9
Dinv43111 Davidia involucrata HOM05D006297 ORTHO05D007873 4.3e-20 103.2 131 51.9
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 6.2e-19 99.4 233 34.8
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 1.3e-16 91.7 291 31.3
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 8.4e-16 89.0 113 48.7
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.4e-15 88.2 318 27.7
QL10p061553 Quercus lobata HOM05D006297 ORTHO05D007873 1.8e-13 81.3 268 33.2
CDE07G0208 Ceratophyllum demersum HOM05D006297 ORTHO05D007873 1.3e-11 75.1 175 37.1
Lsat_1_v5_gn_5_169521 Lactuca sativa HOM05D006297 ORTHO05D007873 2.1e-11 74.3 312 27.9
HanXRQChr11g0340671 Helianthus annuus HOM05D006297 ORTHO05D007873 2.4e-10 70.9 83 48.2
HPP92_015541 Vanilla planifolia HOM05D043147 ORTHO05D007873 3.1e-10 70.5 292 27.1
ECA236G4356 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.2e-09 68.6 168 36.9
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 1.5e-09 68.2 220 32.3


User provided reference genes

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