Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p030395 Quercus lobata HOM05D000003 ORTHO05D000167 3.0e-78 295.0 145 100.0
QL05p007523 Quercus lobata HOM05D000003 ORTHO05D000167 4.6e-10 68.6 134 32.8
QL04p064882 Quercus lobata HOM05D000003 ORTHO05D000167 6.1e-10 68.2 123 31.7
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 7.9e-10 67.8 133 30.1
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-09 67.4 135 34.1
QL03p066006 Quercus lobata HOM05D001020 ORTHO05D014173 1.4e-09 67.0 140 28.6
QL93p0215_0031 Quercus lobata HOM05D000003 ORTHO05D000167 1.4e-09 67.0 123 31.7
QL05p016300 Quercus lobata HOM05D001961 ORTHO05D002286 1.8e-09 66.6 43 81.4
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 2.3e-09 66.2 133 30.1
EL10Ac9g22665 Beta vulgaris HOM05D000003 ORTHO05D000167 5.1e-09 65.1 134 29.9
CSS0031955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 5.1e-09 65.1 123 34.1
Prupe.6G123900 Prunus persica HOM05D000003 ORTHO05D000004 6.7e-09 64.7 134 29.1
QL05p012625 Quercus lobata HOM05D000003 ORTHO05D000167 8.8e-09 64.3 128 32.8
QL05p051227 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-08 63.5 133 33.8
QL07p011546 Quercus lobata HOM05D000003 ORTHO05D000167 2.0e-08 63.2 124 31.5
Prupe.8G099500 Prunus persica HOM05D000003 ORTHO05D000167 2.5e-08 62.8 134 28.4
COL.COLO4_10225 Corchorus olitorius HOM05D000003 ORTHO05D000167 3.3e-08 62.4 122 29.5
COL.COLO4_35519 Corchorus olitorius HOM05D009774 ORTHO05D000167 3.3e-08 62.4 132 29.5
QL07p036969 Quercus lobata HOM05D000003 ORTHO05D000167 4.3e-08 62.0 124 33.9
EL10Ac4g10128 Beta vulgaris HOM05D004808 ORTHO05D005279 5.7e-08 61.6 134 29.9
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 5.7e-08 61.6 134 27.6
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 7.4e-08 61.2 131 30.5
CSS0016328 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 9.7e-08 60.8 112 34.8
Prupe.4G143500 Prunus persica HOM05D000003 ORTHO05D000167 9.7e-08 60.8 136 31.6
QL04p069059 Quercus lobata HOM05D000003 ORTHO05D000167 9.7e-08 60.8 123 29.3
Prupe.1G205500 Prunus persica HOM05D000003 ORTHO05D000167 1.3e-07 60.5 101 32.7
Prupe.2G082600 Prunus persica HOM05D000003 ORTHO05D000167 1.3e-07 60.5 134 27.6
TWI53G0186 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.3e-07 60.5 133 32.3
QL06p034986 Quercus lobata HOM05D000044 ORTHO05D000051 2.2e-07 59.7 109 31.2
QL12p001149 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-07 59.7 133 28.6
RcHm_v2.0_Chr5g0066251 Rosa chinensis HOM05D000003 ORTHO05D011454 2.2e-07 59.7 137 32.1
QL05p038991 Quercus lobata HOM05D000003 ORTHO05D000167 2.8e-07 59.3 123 29.3
QL02p037441 Quercus lobata HOM05D000003 ORTHO05D000167 3.7e-07 58.9 130 26.9
COL.COLO4_16438 Corchorus olitorius HOM05D009774 ORTHO05D000167 4.8e-07 58.5 132 26.5
Prupe.6G204400 Prunus persica HOM05D000003 ORTHO05D015270 4.8e-07 58.5 138 25.4
CANSAT21G0988 Cannabis sativa HOM05D000003 ORTHO05D000004 6.3e-07 58.2 134 30.6
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 6.3e-07 58.2 132 27.3
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 6.3e-07 58.2 126 32.5
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 6.3e-07 58.2 118 31.4
Duzib268G0434 Durio zibethinus HOM05D000003 ORTHO05D000167 8.2e-07 57.8 99 32.3
QL02p023292 Quercus lobata HOM05D000003 ORTHO05D000167 8.2e-07 57.8 133 26.3
TWI36G1323 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 8.2e-07 57.8 135 27.4
QL08p037725 Quercus lobata HOM05D000003 ORTHO05D000167 1.1e-06 57.4 96 33.3
QL07p038559 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-06 56.6 124 28.2
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 1.8e-06 56.6 135 27.4
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 2.4e-06 56.2 138 28.3
AUR62034216 Chenopodium quinoa HOM05D000003 ORTHO05D000167 2.4e-06 56.2 107 31.8
Prupe.7G049300 Prunus persica HOM05D000003 ORTHO05D000004 2.4e-06 56.2 126 29.4
CANSAT64G1526 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-06 55.8 114 34.2
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 3.1e-06 55.8 109 33.0
CSS0003020 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 4.1e-06 55.5 108 30.6
TAR256G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000167 4.1e-06 55.5 104 29.8
COL.COLO4_05919 Corchorus olitorius HOM05D009774 ORTHO05D000167 5.3e-06 55.1 132 27.3
QL10p036891 Quercus lobata HOM05D000003 ORTHO05D000004 5.3e-06 55.1 102 31.4
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.3e-06 55.1 139 25.9
CANSAT64G1247 Cannabis sativa HOM05D000003 ORTHO05D000167 6.9e-06 54.7 135 28.9
QL01p055468 Quercus lobata HOM05D000003 ORTHO05D000167 6.9e-06 54.7 124 28.2
QL02p037922 Quercus lobata HOM05D000003 ORTHO05D000167 6.9e-06 54.7 91 29.7
CANSAT25G3483 Cannabis sativa HOM05D000003 ORTHO05D000167 9.1e-06 54.3 134 32.1
QL08p006218 Quercus lobata HOM05D000003 ORTHO05D000167 9.1e-06 54.3 97 29.9
QL08p050763 Quercus lobata HOM05D000003 ORTHO05D000167 9.1e-06 54.3 104 31.7
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 9.1e-06 54.3 121 25.6


User provided reference genes

Program Settings