Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p030139 Quercus lobata HOM05D000091 ORTHO05D337195 1.6e-29 132.1 67 100.0
Ciclev10000732m.g Citrus clementina HOM05D000091 ORTHO05D009985 2.8e-10 68.2 58 62.1
MD04G1207200 Malus domestica HOM05D000091 ORTHO05D009985 3.7e-10 67.8 57 63.2
Dinv23954 Davidia involucrata HOM05D000091 ORTHO05D009985 1.4e-09 65.9 58 58.6
Prupe.6G328100 Prunus persica HOM05D000091 ORTHO05D009985 1.8e-09 65.5 57 57.9
Cfa006571 Carpinus fangiana HOM05D000091 ORTHO05D009985 3.1e-09 64.7 58 56.9
CiPaw.07G016000 Carya illinoinensis HOM05D000091 ORTHO05D009985 3.1e-09 64.7 57 56.1
CSS0020687 Camellia sinensis var. sinensis HOM05D000091 ORTHO05D009985 4.0e-09 64.3 59 57.6
Haze_04210 Corylus avellana HOM05D000091 ORTHO05D009985 1.2e-08 62.8 58 55.2
FAN05G1162 Fragaria x ananassa HOM05D000091 ORTHO05D009985 2.6e-08 61.6 50 58.0
FAN05G5100 Fragaria x ananassa HOM05D000091 ORTHO05D009985 2.6e-08 61.6 50 58.0
FAN14G5441 Fragaria x ananassa HOM05D000091 ORTHO05D009985 2.6e-08 61.6 50 58.0
FAN14G0888 Fragaria x ananassa HOM05D000091 ORTHO05D009985 3.4e-08 61.2 50 58.0
Manes.08G122400 Manihot esculenta HOM05D000091 ORTHO05D009985 4.5e-08 60.8 50 56.0
Hund07058 Selenicereus undatus HOM05D000091 ORTHO05D009985 4.5e-08 60.8 51 54.9
Hma1.2p1_0617F.1_g190220 Hydrangea macrophylla HOM05D000091 ORTHO05D009985 5.8e-08 60.5 57 56.1
FAN09G2123 Fragaria x ananassa HOM05D000091 ORTHO05D009985 7.6e-08 60.1 50 56.0
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 1.0e-07 59.7 62 50.0
Eucgr.H04478 Eucalyptus grandis HOM05D000091 ORTHO05D009985 1.3e-07 59.3 50 56.0
EL10Ac4g09336 Beta vulgaris HOM05D000091 ORTHO05D009985 1.7e-07 58.9 51 52.9
CANSAT54G0386 Cannabis sativa HOM05D000091 ORTHO05D009985 1.7e-07 58.9 50 58.0
FvH4_6g05590 Fragaria vesca HOM05D000091 ORTHO05D009985 1.7e-07 58.9 50 54.0
Glyma.10G155600 Glycine max HOM05D000091 ORTHO05D009985 2.2e-07 58.5 51 56.9
Glyma.20G232700 Glycine max HOM05D000091 ORTHO05D009985 2.2e-07 58.5 51 56.9
RcHm_v2.0_Chr3g0454371 Rosa chinensis HOM05D000091 ORTHO05D009985 2.2e-07 58.5 50 56.0
TWI56G0296 Tripterygium wilfordii HOM05D000091 ORTHO05D009985 2.9e-07 58.2 58 53.4
CAN.G1077.22 Capsicum annuum HOM05D000091 ORTHO05D009985 1.1e-06 56.2 51 54.9
Lj9A27T16 Lonicera japonica HOM05D000091 ORTHO05D009985 1.1e-06 56.2 51 54.9
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 1.4e-06 55.8 51 49.0
Psat0s1377g0320 Pisum sativum HOM05D000091 ORTHO05D009985 1.4e-06 55.8 57 47.4
Phvul.007G181100 Phaseolus vulgaris HOM05D000091 ORTHO05D009985 2.5e-06 55.1 47 53.2
Sed0026147 Sechium edule HOM05D000091 ORTHO05D004126 5.5e-06 53.9 46 54.3
Solyc01g098820.3 Solanum lycopersicum HOM05D000091 ORTHO05D009985 5.5e-06 53.9 46 56.5
Ah.06g189200 Amaranthus hybridus HOM05D000091 ORTHO05D009985 7.1e-06 53.5 51 49.0
Cpa.g.sc48.32 Carica papaya HOM05D000091 ORTHO05D009985 9.3e-06 53.1 57 45.6
Thecc.07G186800 Theobroma cacao HOM05D000091 ORTHO05D009985 9.3e-06 53.1 61 49.2
VMungo0720G0994 Vigna mungo HOM05D000091 ORTHO05D009985 9.3e-06 53.1 51 51.0


User provided reference genes

Program Settings