Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p029253 Quercus lobata HOM05D008943 ORTHO05D010477 2.4e-66 255.4 128 100.0
CiPaw.14G065200 Carya illinoinensis HOM05D008943 ORTHO05D010477 1.6e-30 136.3 130 59.2
CiPaw.13G089400 Carya illinoinensis HOM05D008943 ORTHO05D010477 4.1e-26 121.7 131 57.3
Haze_24168 Corylus avellana HOM05D008943 ORTHO05D010477 2.6e-25 119.0 120 56.7
Haze_24173 Corylus avellana HOM05D008943 ORTHO05D010477 2.6e-25 119.0 120 56.7
Cfa011556 Carpinus fangiana HOM05D008943 ORTHO05D010477 4.7e-22 108.2 113 55.8
RcHm_v2.0_Chr5g0066341 Rosa chinensis HOM05D008943 ORTHO05D010477 5.3e-18 94.7 109 46.8
Prupe.6G070600 Prunus persica HOM05D008943 ORTHO05D010477 7.0e-18 94.4 112 50.0
Glyma.15G035400 Glycine max HOM05D008943 ORTHO05D010477 1.6e-17 93.2 109 46.8
TWI79G1516 Tripterygium wilfordii HOM05D008943 ORTHO05D010477 3.5e-17 92.0 136 45.6
FvH4_3g36931 Fragaria vesca HOM05D008943 ORTHO05D010477 1.0e-16 90.5 110 47.3
Lj3g0000367 Lotus japonicus HOM05D008943 ORTHO05D010477 2.2e-16 89.4 112 47.3
Medtr2g097730 Medicago truncatula HOM05D008943 ORTHO05D010477 2.2e-16 89.4 120 39.2
Thecc.09G315700 Theobroma cacao HOM05D014101 ORTHO05D010477 1.5e-15 86.7 115 45.2
TPR.G6894 Trifolium pratense HOM05D008943 ORTHO05D010477 2.1e-14 82.8 111 42.3
Lj3g0017475 Lotus japonicus HOM05D008943 ORTHO05D010477 4.7e-14 81.6 111 44.1
Oeu054839.1 Olea europaea HOM05D008943 ORTHO05D010477 1.0e-13 80.5 128 39.8
Glyma.13G338900 Glycine max HOM05D008943 ORTHO05D010477 1.4e-13 80.1 127 40.2
TWI31G0177 Tripterygium wilfordii HOM05D008943 ORTHO05D010477 1.4e-13 80.1 136 40.4
ClCG02G019900 Citrullus lanatus HOM05D008943 ORTHO05D010477 4.0e-13 78.6 117 43.6
Sabra09G0025900 Salix brachista HOM05D008943 ORTHO05D010477 4.0e-13 78.6 126 43.7
MELO3C025891.2 Cucumis melo HOM05D008943 ORTHO05D010477 5.2e-13 78.2 111 45.9
CsaV3_7G010000 Cucumis sativus L. HOM05D008943 ORTHO05D010477 5.2e-13 78.2 111 46.8
Potri.009G036600 Populus trichocarpa HOM05D008943 ORTHO05D010477 8.8e-13 77.4 115 42.6
Lalb_Chr14g0372021 Lupinus albus HOM05D008943 ORTHO05D010477 3.4e-12 75.5 112 44.6
Potri.001G244200 Populus trichocarpa HOM05D008943 ORTHO05D010477 1.4e-10 70.1 120 39.2
Duzib168G0546 Durio zibethinus HOM05D014101 ORTHO05D010477 2.4e-10 69.3 120 38.3
Manes.01G169500 Manihot esculenta HOM05D008943 ORTHO05D010477 3.1e-10 68.9 136 35.3
Cc01_g13330 Coffea canephora HOM05D008943 ORTHO05D010477 5.4e-10 68.2 141 39.7
VMungo1080G1120 Vigna mungo HOM05D008943 ORTHO05D010477 5.9e-09 64.7 112 39.3
Phvul.L008143 Phaseolus vulgaris HOM05D008943 ORTHO05D010477 1.0e-08 63.9 109 40.4
Ciclev10030147m.g Citrus clementina HOM05D008943 ORTHO05D010477 1.3e-08 63.5 128 36.7
PGSC0003DMG400030330 Solanum tuberosum HOM05D018880 ORTHO05D010477 1.3e-08 63.5 110 41.8
Peaxi162Scf00481g00035 Petunia axillaris HOM05D018880 ORTHO05D010477 1.7e-08 63.2 109 39.4
CANSAT54G0610 Cannabis sativa HOM05D008943 ORTHO05D010477 2.9e-08 62.4 144 31.2
Nn2g11207 Nelumbo nucifera HOM05D008943 ORTHO05D010477 2.9e-08 62.4 115 39.1
Nitab4.5_0000463g0120 Nicotiana tabacum HOM05D018880 ORTHO05D010477 2.9e-08 62.4 112 40.2
Nitab4.5_0006916g0040 Nicotiana tabacum HOM05D018880 ORTHO05D010477 3.8e-08 62.0 112 40.2
COL.COLO4_18576 Corchorus olitorius HOM05D014101 ORTHO05D010477 1.1e-07 60.5 112 37.5
ECA247G2559 Erigeron canadensis HOM05D008943 ORTHO05D010477 1.1e-07 60.5 127 37.0
A10p06000 Brassica napus HOM05D010249 ORTHO05D012412 1.9e-07 59.7 132 37.1
Sed0015087 Sechium edule HOM05D008943 ORTHO05D010477 1.9e-07 59.7 111 41.4
Sopen06g032790 Solanum pennellii HOM05D018880 ORTHO05D010477 2.5e-07 59.3 109 39.4
Lsat_1_v5_gn_9_24780 Lactuca sativa HOM05D008943 ORTHO05D010477 3.2e-07 58.9 128 37.5
BraA10t42862Z Brassica rapa HOM05D010249 ORTHO05D012412 4.2e-07 58.5 132 37.1
CSS0017531 Camellia sinensis var. sinensis HOM05D003940 ORTHO05D004461 9.4e-07 57.4 104 35.6
BcaC05g24698 Brassica carinata HOM05D010249 ORTHO05D012412 1.6e-06 56.6 132 35.6
BolC5t29320H Brassica oleracea HOM05D010249 ORTHO05D012412 1.6e-06 56.6 132 35.6
C05p05480 Brassica napus HOM05D010249 ORTHO05D012412 2.7e-06 55.8 132 35.6
CARHR007230 Cardamine hirsuta HOM05D010249 ORTHO05D012412 3.6e-06 55.5 132 37.1
TAR636G1753 Trochodendron aralioides HOM05D003940 ORTHO05D004461 4.7e-06 55.1 108 36.1
BcaB02g06739 Brassica carinata HOM05D010249 ORTHO05D012412 6.1e-06 54.7 123 38.2
Sed0005589 Sechium edule HOM05D008943 ORTHO05D010477 6.1e-06 54.7 118 33.9


User provided reference genes

Program Settings