Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p028907 Quercus lobata HOM05D004551 ORTHO05D005262 5.3e-41 170.6 88 100.0
CiPaw.13G084300 Carya illinoinensis HOM05D004551 ORTHO05D005262 9.6e-35 149.8 88 90.9
MD11G1085200 Malus domestica HOM05D004551 ORTHO05D005262 2.1e-34 148.7 88 88.6
CSS0004921 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 6.2e-34 147.1 88 88.6
Prupe.6G065200 Prunus persica HOM05D004551 ORTHO05D005262 6.2e-34 147.1 88 79.5
Hma1.2p1_1521F.1_g288710 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 1.5e-32 142.5 82 80.5
Hma1.2p1_0543F.1_g175360 Hydrangea macrophylla HOM05D004551 ORTHO05D005262 2.0e-32 142.1 82 86.6
CiPaw.14G063000 Carya illinoinensis HOM05D004551 ORTHO05D005262 3.4e-32 141.4 88 86.4
HanXRQChr08g0237601 Helianthus annuus HOM05D004551 ORTHO05D005262 5.8e-32 140.6 88 79.5
GSVIVG01024832001 Vitis vinifera HOM05D004551 ORTHO05D005262 5.8e-32 140.6 80 90.0
Lsat_1_v5_gn_9_25241 Lactuca sativa HOM05D004551 ORTHO05D005262 7.6e-32 140.2 88 78.4
Lj3g0011983 Lotus japonicus HOM05D004551 ORTHO05D005262 7.6e-32 140.2 81 81.5
Sed0000742 Sechium edule HOM05D004551 ORTHO05D005262 9.9e-32 139.8 88 81.8
ClCG03G001090 Citrullus lanatus HOM05D004551 ORTHO05D005262 1.7e-31 139.0 88 83.0
MELO3C020586.2 Cucumis melo HOM05D004551 ORTHO05D005262 1.7e-31 139.0 88 83.0
CsaV3_1G035840 Cucumis sativus L. HOM05D004551 ORTHO05D005262 1.7e-31 139.0 88 83.0
Lj4g0001727 Lotus japonicus HOM05D004551 ORTHO05D005262 1.7e-31 139.0 81 80.2
HanXRQChr02g0055991 Helianthus annuus HOM05D004551 ORTHO05D005262 2.2e-31 138.7 88 78.4
HanXRQChr09g0243371 Helianthus annuus HOM05D004551 ORTHO05D005262 2.2e-31 138.7 88 78.4
HanXRQChr09g0243381 Helianthus annuus HOM05D004551 ORTHO05D005262 2.2e-31 138.7 88 78.4
CANSAT54G1854 Cannabis sativa HOM05D004551 ORTHO05D005262 2.9e-31 138.3 86 84.9
Actinidia08554 Actinidia chinensis HOM05D004551 ORTHO05D005262 3.8e-31 137.9 88 84.1
Dinv34317 Davidia involucrata HOM05D004551 ORTHO05D005262 3.8e-31 137.9 88 83.0
Oeu017418.1 Olea europaea HOM05D004551 ORTHO05D005262 3.8e-31 137.9 82 78.0
Glyma.02G308400 Glycine max HOM05D004551 ORTHO05D005262 4.9e-31 137.5 79 79.7
Glyma.13G339700 Glycine max HOM05D004551 ORTHO05D005262 8.4e-31 136.7 79 79.7
Oeu036200.1 Olea europaea HOM05D004551 ORTHO05D005262 8.4e-31 136.7 80 77.5
Dinv35533 Davidia involucrata HOM05D004551 ORTHO05D005262 1.4e-30 136.0 78 82.1
Lalb_Chr24g0397121 Lupinus albus HOM05D004551 ORTHO05D005262 1.9e-30 135.6 82 74.4
Nn2g13555 Nelumbo nucifera HOM05D004551 ORTHO05D005262 2.5e-30 135.2 80 86.2
FvH4_3g37430 Fragaria vesca HOM05D004551 ORTHO05D005262 7.1e-30 133.7 79 77.2
FAN11G1128 Fragaria x ananassa HOM05D004551 ORTHO05D005262 7.1e-30 133.7 79 77.2
FAN16G1443 Fragaria x ananassa HOM05D004551 ORTHO05D005262 7.1e-30 133.7 79 77.2
FAN16G2867 Fragaria x ananassa HOM05D004551 ORTHO05D005262 7.1e-30 133.7 79 77.2
FAN25G2220 Fragaria x ananassa HOM05D004551 ORTHO05D005262 7.1e-30 133.7 79 77.2
MBI05_g10286_MAGBIO Magnolia biondii HOM05D004551 ORTHO05D005262 7.1e-30 133.7 80 78.8
Glyma.15G034700 Glycine max HOM05D004551 ORTHO05D005262 9.3e-30 133.3 79 77.2
CSS0032515 Camellia sinensis var. sinensis HOM05D004551 ORTHO05D005262 1.2e-29 132.9 80 76.2
Ca_01298_v3 Cicer arietinum L. HOM05D004551 ORTHO05D005262 1.2e-29 132.9 78 76.9
Phvul.008G288300 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 1.2e-29 132.9 79 75.9
Migut.L01982 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.6e-29 132.5 88 69.3
RcHm_v2.0_Chr5g0067321 Rosa chinensis HOM05D004551 ORTHO05D005262 1.6e-29 132.5 80 83.8
arahy.Tifrunner.gnm1.ann1.S44GTI Arachis hypogaea HOM05D004551 ORTHO05D005262 2.1e-29 132.1 89 71.9
Psat5g285840 Pisum sativum HOM05D004551 ORTHO05D005262 2.1e-29 132.1 76 78.9
Glyma.14G004700 Glycine max HOM05D004551 ORTHO05D005262 3.5e-29 131.3 79 75.9
SalBow1G6960 Salvia bowleyana HOM05D004551 ORTHO05D005262 7.9e-29 130.2 82 72.0
Cc01_g13610 Coffea canephora HOM05D004551 ORTHO05D005262 1.0e-28 129.8 75 88.0
arahy.Tifrunner.gnm1.ann1.CMV3ZL Arachis hypogaea HOM05D004551 ORTHO05D005262 1.3e-28 129.4 89 69.7
unitig_578.g15888 Utricularia gibba HOM05D004551 ORTHO05D005262 1.3e-28 129.4 88 68.2
Migut.J00249 Erythranthe guttata HOM05D004551 ORTHO05D005262 1.8e-28 129.0 86 70.9
PSO339G1751 Papaver somniferum HOM05D004551 ORTHO05D005262 2.3e-28 128.6 88 68.2
PSO384G2886 Papaver somniferum HOM05D004551 ORTHO05D005262 2.3e-28 128.6 88 68.2
Eucgr.B02289 Eucalyptus grandis HOM05D004551 ORTHO05D005262 3.0e-28 128.3 88 79.5
Nitab4.5_0002152g0070 Nicotiana tabacum HOM05D004551 ORTHO05D005262 3.9e-28 127.9 77 75.3
TPR.G6876 Trifolium pratense HOM05D004551 ORTHO05D005262 3.9e-28 127.9 78 74.4
Rhsim04G0164100 Rhododendron simsii HOM05D004551 ORTHO05D005262 6.7e-28 127.1 88 70.5
FAN21G1099 Fragaria x ananassa HOM05D004551 ORTHO05D005262 1.1e-27 126.3 72 80.6
CDE02G0008 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 1.5e-27 125.9 88 68.2
Peaxi162Scf01302g00041 Petunia axillaris HOM05D004551 ORTHO05D005262 1.5e-27 125.9 77 75.3
Cc06_g01910 Coffea canephora HOM05D004551 ORTHO05D005262 2.5e-27 125.2 83 73.5
Sed0006275 Sechium edule HOM05D004551 ORTHO05D005262 2.5e-27 125.2 72 86.1
Solyc09g011760.3 Solanum lycopersicum HOM05D004551 ORTHO05D005262 3.3e-27 124.8 79 73.4
Sopen09g006580 Solanum pennellii HOM05D004551 ORTHO05D005262 3.3e-27 124.8 79 73.4
CDE04G2361 Ceratophyllum demersum HOM05D004551 ORTHO05D005262 5.6e-27 124.0 75 73.3
PGSC0003DMG402020339 Solanum tuberosum HOM05D004551 ORTHO05D005262 5.6e-27 124.0 79 72.2
Medtr2g097870 Medicago truncatula HOM05D004551 ORTHO05D005262 1.3e-26 122.9 74 74.3
TWI75G0664 Tripterygium wilfordii HOM05D004551 ORTHO05D005262 2.1e-26 122.1 85 65.9
Sc12g0001090 Simmondsia chinensis HOM05D004551 ORTHO05D005262 2.8e-26 121.7 80 80.0
Pp3c1_35930 Physcomitrium patens HOM05D004551 ORTHO05D005262 6.2e-26 120.6 77 66.2
Zm00001eb211450 Zea mays HOM05D004551 ORTHO05D005262 6.2e-26 120.6 73 75.3
Glyma.15G229800 Glycine max HOM05D004551 ORTHO05D005262 8.2e-26 120.2 67 83.6
Thecc.09G309400 Theobroma cacao HOM05D004551 ORTHO05D005262 1.1e-25 119.8 83 67.5
Ciclev10029702m.g Citrus clementina HOM05D004551 ORTHO05D005262 1.4e-25 119.4 83 68.7
MD03G1080700 Malus domestica HOM05D004551 ORTHO05D005262 1.8e-25 119.0 62 85.5
Sopen06g001810 Solanum pennellii HOM05D004551 ORTHO05D005262 1.8e-25 119.0 88 67.0
Hund18875 Selenicereus undatus HOM05D004551 ORTHO05D005262 2.4e-25 118.6 82 65.9
Os03g0825400 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 3.1e-25 118.2 78 76.9
Solyc06g005840.4 Solanum lycopersicum HOM05D004551 ORTHO05D005262 3.1e-25 118.2 88 67.0
Gohir.A03G047200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 4.0e-25 117.9 81 67.9
Gorai.003G126500 Gossypium raimondii HOM05D004551 ORTHO05D005262 4.0e-25 117.9 81 67.9
THA.LOC104800711 Tarenaya hassleriana HOM05D004551 ORTHO05D005262 5.3e-25 117.5 78 66.7
PGSC0003DMG400020830 Solanum tuberosum HOM05D004551 ORTHO05D005262 9.0e-25 116.7 80 68.8
Duzib168G2386 Durio zibethinus HOM05D004551 ORTHO05D005262 1.2e-24 116.3 81 66.7
Aa31LG5G6930 Aethionema arabicum HOM05D004551 ORTHO05D005262 1.5e-24 115.9 78 65.4
Duzib150G1644 Durio zibethinus HOM05D004551 ORTHO05D005262 1.5e-24 115.9 81 74.1
Lalb_Chr22g0352421 Lupinus albus HOM05D004551 ORTHO05D005262 2.0e-24 115.5 67 76.1
vmacro08615 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 2.0e-24 115.5 81 70.4
Gohir.A05G091300 Gossypium hirsutum HOM05D004551 ORTHO05D005262 2.6e-24 115.2 79 68.4
Gohir.D05G092200 Gossypium hirsutum HOM05D004551 ORTHO05D005262 2.6e-24 115.2 79 68.4
Gorai.009G094700 Gossypium raimondii HOM05D004551 ORTHO05D005262 2.6e-24 115.2 79 68.4
Sp4g12260 Schrenkiella parvula HOM05D004551 ORTHO05D005262 2.6e-24 115.2 78 65.4
unitig_8.g4441 Utricularia gibba HOM05D004551 ORTHO05D005262 3.4e-24 114.8 97 61.9
Haze_24227 Corylus avellana HOM05D004551 ORTHO05D005262 4.5e-24 114.4 70 80.0
Dinv17073 Davidia involucrata HOM05D004551 ORTHO05D005262 4.5e-24 114.4 67 77.6
Dinv43017 Davidia involucrata HOM05D004551 ORTHO05D005262 4.5e-24 114.4 67 77.6
Thhalv10017490m.g Eutrema salsugineum HOM05D004551 ORTHO05D005262 4.5e-24 114.4 78 65.4
CARHR122870 Cardamine hirsuta HOM05D004551 ORTHO05D005262 7.6e-24 113.6 78 64.1
COL.COLO4_19068 Corchorus olitorius HOM05D004551 ORTHO05D005262 7.6e-24 113.6 83 63.9
Duzib170G1093 Durio zibethinus HOM05D004551 ORTHO05D005262 7.6e-24 113.6 81 72.8
AL4G24240 Arabidopsis lyrata HOM05D004551 ORTHO05D005262 1.3e-23 112.8 78 64.1
AT2G29530 Arabidopsis thaliana HOM05D004551 ORTHO05D005262 1.3e-23 112.8 78 64.1
Os07g0243100 Oryza sativa ssp. japonica HOM05D004551 ORTHO05D005262 1.3e-23 112.8 70 70.0
A04p22520 Brassica napus HOM05D004551 ORTHO05D005262 2.2e-23 112.1 78 62.8
vmacro03012 Vaccinium macrocarpon HOM05D004551 ORTHO05D005262 3.8e-23 111.3 73 74.0
EL10Ac7g16095 Beta vulgaris HOM05D004551 ORTHO05D005262 6.5e-23 110.5 85 64.7
Mapoly0052s0053 Marchantia polymorpha HOM05D004551 ORTHO05D005262 8.4e-23 110.2 74 63.5
A05p15870 Brassica napus HOM05D004551 ORTHO05D005262 1.1e-22 109.8 77 63.6
C04p21310 Brassica napus HOM05D004551 ORTHO05D005262 1.1e-22 109.8 77 63.6
Potri.009G039600 Populus trichocarpa HOM05D004551 ORTHO05D005262 1.1e-22 109.8 85 57.6
AagrBONN_evm.TU.Sc2ySwM_117.3522 Anthoceros agrestis HOM05D004551 ORTHO05D005262 1.4e-22 109.4 79 59.5
DCAR_005918 Daucus carota HOM05D004551 ORTHO05D005262 1.4e-22 109.4 71 80.3
ECA247G0999 Erigeron canadensis HOM05D004551 ORTHO05D005262 1.4e-22 109.4 88 69.3
Atru.chr3.4045 Acer truncatum HOM05D004551 ORTHO05D005262 1.9e-22 109.0 82 69.5
Carub.0004s1058 Capsella rubella HOM05D004551 ORTHO05D005262 2.5e-22 108.6 78 61.5
Aqoxy1G00774 Aquilegia oxysepala HOM05D004551 ORTHO05D005262 4.2e-22 107.8 71 71.8
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 4.2e-22 107.8 77 62.3
HPP92_018167 Vanilla planifolia HOM05D004551 ORTHO05D005262 4.2e-22 107.8 58 86.2
CAN.G978.3 Capsicum annuum HOM05D004551 ORTHO05D005262 7.1e-22 107.1 65 73.8
Potri.001G246500 Populus trichocarpa HOM05D004551 ORTHO05D005262 1.2e-21 106.3 85 55.3
BolC4t27387H Brassica oleracea HOM05D004551 ORTHO05D005262 1.6e-21 105.9 87 56.3
PGR102G3288 Punica granatum HOM05D004551 ORTHO05D005262 1.6e-21 105.9 71 83.1
Ah.15g090420 Amaranthus hybridus HOM05D004551 ORTHO05D005262 3.5e-21 104.8 77 58.4
Nitab4.5_0002405g0130 Nicotiana tabacum HOM05D004551 ORTHO05D005262 3.5e-21 104.8 81 64.2
C04p58670 Brassica napus HOM05D004551 ORTHO05D005262 1.0e-20 103.2 90 54.4
QL02p091823 Quercus lobata HOM05D000741 ORTHO05D000506 1.9e-19 99.0 53 84.9
Manes.01G166600 Manihot esculenta HOM05D004551 ORTHO05D005262 2.5e-19 98.6 88 55.7
QL02p079044 Quercus lobata HOM05D004551 ORTHO05D005262 2.5e-19 98.6 52 86.5
Manes.02G124000 Manihot esculenta HOM05D004551 ORTHO05D005262 4.3e-19 97.8 82 53.7
BraA04t17797Z Brassica rapa HOM05D004551 ORTHO05D005262 9.7e-19 96.7 107 45.8
SMO172G0051 Selaginella moellendorffii HOM05D004551 ORTHO05D005262 9.7e-19 96.7 71 63.4
BcaB06g28317 Brassica carinata HOM05D004551 ORTHO05D005262 6.3e-18 94.0 77 62.3
ECA236G0522 Erigeron canadensis HOM05D004551 ORTHO05D005262 6.3e-18 94.0 58 75.9
BraA05t20500Z Brassica rapa HOM05D004551 ORTHO05D005262 1.8e-17 92.4 85 54.1
Oeu030799.1 Olea europaea HOM05D004551 ORTHO05D005262 3.1e-17 91.7 52 78.8
Phvul.L008843 Phaseolus vulgaris HOM05D004551 ORTHO05D005262 3.1e-17 91.7 79 60.8
AUR62020055 Chenopodium quinoa HOM05D004551 ORTHO05D005262 4.1e-17 91.3 63 68.3
Nitab4.5_0000880g0120 Nicotiana tabacum HOM05D004551 ORTHO05D005262 6.9e-17 90.5 54 75.9
Sabra16G0149600 Salix brachista HOM05D004551 ORTHO05D005262 1.2e-16 89.7 70 57.1
HPP92_018179 Vanilla planifolia HOM05D004551 ORTHO05D005262 2.6e-16 88.6 62 71.0
VMungo0647G0519 Vigna mungo HOM05D000879 ORTHO05D002864 2.6e-16 88.6 54 72.2
Zm00001eb063090 Zea mays HOM05D004551 ORTHO05D005262 3.4e-16 88.2 77 61.0
Gohir.D03G120000 Gossypium hirsutum HOM05D004551 ORTHO05D005262 7.7e-16 87.0 81 56.8
CBR_g3168 Chara braunii HOM05D004551 ORTHO05D005262 2.2e-15 85.5 75 48.0
Ah.13g070320 Amaranthus hybridus HOM05D004551 ORTHO05D005262 2.9e-15 85.1 56 71.4
MD02G1203300 Malus domestica HOM05D004551 ORTHO05D005262 2.9e-15 85.1 47 83.0
MCO07G332 Micromonas commoda HOM05D004551 ORTHO05D005262 3.8e-15 84.7 69 47.8
EL10Ac7g17098 Beta vulgaris HOM05D004551 ORTHO05D005262 4.2e-14 81.3 97 46.4
BolC4t23660H Brassica oleracea HOM05D004551 ORTHO05D005262 7.9e-13 77.0 54 61.1
Rhsim13G0075400 Rhododendron simsii HOM05D004551 ORTHO05D005262 3.9e-12 74.7 73 56.2
AUR62001717 Chenopodium quinoa HOM05D004551 ORTHO05D005262 5.1e-12 74.3 96 44.8
SGA_v2.0_scaffold75G24985 Striga asiatica HOM05D001002 ORTHO05D000802 6.7e-12 73.9 42 73.8
DCAR_007410 Daucus carota HOM05D004551 ORTHO05D005262 1.5e-11 72.8 71 53.5
Cre12.g514900 Chlamydomonas reinhardtii HOM05D004551 ORTHO05D005262 4.3e-11 71.2 78 41.0
TPR.G13621 Trifolium pratense HOM05D004551 ORTHO05D005262 3.7e-10 68.2 58 60.3
PRCOL_00001542 Prasinoderma coloniale HOM05D002457 ORTHO05D005262 4.5e-08 61.2 58 53.4
SHI22087 Sapria himalayana HOM05D004551 ORTHO05D005262 5.0e-07 57.8 57 45.6
MD02G1278800 Malus domestica HOM05D004551 ORTHO05D005262 1.4e-06 56.2 59 52.5
MELO3C035440.2 Cucumis melo HOM05D004551 ORTHO05D005262 7.2e-06 53.9 119 36.1


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