Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p028322 Quercus lobata HOM05D003196 ORTHO05D003543 2.7e-58 228.4 110 100.0
QL05p013214 Quercus lobata HOM05D003196 ORTHO05D003543 2.8e-15 85.5 49 87.8
QL05p014163 Quercus lobata HOM05D003196 ORTHO05D003543 2.8e-15 85.5 49 87.8
QL05p014014 Quercus lobata HOM05D000311 ORTHO05D000183 3.6e-15 85.1 63 71.4
ClCG09G000640 Citrullus lanatus HOM05D003196 ORTHO05D003543 2.4e-14 82.4 111 45.0
Thecc.06G109100 Theobroma cacao HOM05D003196 ORTHO05D003543 1.5e-13 79.7 101 48.5
MELO3C024395.2 Cucumis melo HOM05D003196 ORTHO05D003543 7.6e-13 77.4 96 45.8
CsaV3_7G034840 Cucumis sativus L. HOM05D003196 ORTHO05D003543 1.7e-12 76.3 96 46.9
CiPaw.01G225600 Carya illinoinensis HOM05D003196 ORTHO05D003543 2.9e-12 75.5 95 47.4
CiPaw.02G140800 Carya illinoinensis HOM05D003196 ORTHO05D003543 1.1e-11 73.6 95 45.3
QL04p071305 Quercus lobata HOM05D003196 ORTHO05D003543 1.1e-11 73.6 95 49.5
Duzib235G0666 Durio zibethinus HOM05D003196 ORTHO05D003543 1.4e-11 73.2 100 43.0
QL05p013055 Quercus lobata HOM05D003196 ORTHO05D003543 1.4e-11 73.2 49 81.6
Sed0009658 Sechium edule HOM05D003196 ORTHO05D003543 1.9e-11 72.8 110 43.6
MBI01_g09953_MAGBIO Magnolia biondii HOM05D003196 ORTHO05D003543 2.4e-11 72.4 103 45.6
RcHm_v2.0_Chr2g0142911 Rosa chinensis HOM05D003196 ORTHO05D003543 4.2e-11 71.6 96 44.8
MD09G1194300 Malus domestica HOM05D003196 ORTHO05D003543 5.4e-11 71.2 95 48.4
FAN05G4539 Fragaria x ananassa HOM05D003196 ORTHO05D003543 9.3e-11 70.5 96 44.8
TAR636G1648 Trochodendron aralioides HOM05D003196 ORTHO05D003543 9.3e-11 70.5 101 43.6
COL.COLO4_30652 Corchorus olitorius HOM05D000032 ORTHO05D002561 1.6e-10 69.7 103 44.7
Glyma.08G193800 Glycine max HOM05D003196 ORTHO05D003543 4.6e-10 68.2 110 41.8
Hma1.2p1_0388F.1_g142290 Hydrangea macrophylla HOM05D003196 ORTHO05D003543 7.8e-10 67.4 108 38.9
Medtr8g016210 Medicago truncatula HOM05D003196 ORTHO05D003543 7.8e-10 67.4 107 36.4
Ca_23312_v3 Cicer arietinum L. HOM05D003196 ORTHO05D003543 1.0e-09 67.0 95 43.2
FvH4_6g33180 Fragaria vesca HOM05D003196 ORTHO05D003543 1.7e-09 66.2 96 43.8
HanXRQChr10g0313061 Helianthus annuus HOM05D003196 ORTHO05D003543 1.7e-09 66.2 102 42.2
CANSAT56G4409 Cannabis sativa HOM05D003196 ORTHO05D003543 2.3e-09 65.9 99 44.4
Potri.001G200200 Populus trichocarpa HOM05D003196 ORTHO05D003543 3.0e-09 65.5 97 42.3
Duzib192G0676 Durio zibethinus HOM05D003196 ORTHO05D003543 3.9e-09 65.1 101 43.6
FAN14G0807 Fragaria x ananassa HOM05D003196 ORTHO05D003543 1.1e-08 63.5 96 42.7
VMungo0331G0087 Vigna mungo HOM05D003196 ORTHO05D003543 1.1e-08 63.5 113 38.9
Lalb_Chr25g0280681 Lupinus albus HOM05D003196 ORTHO05D003543 2.5e-08 62.4 95 42.1
vmacro18791 Vaccinium macrocarpon HOM05D003196 ORTHO05D003543 2.5e-08 62.4 105 41.0
Gohir.D10G061900 Gossypium hirsutum HOM05D003196 ORTHO05D003543 3.3e-08 62.0 110 37.3
Gorai.011G066100 Gossypium raimondii HOM05D003196 ORTHO05D003543 3.3e-08 62.0 110 37.3
MD17G1174800 Malus domestica HOM05D003196 ORTHO05D003543 3.3e-08 62.0 96 42.7
BolC6t36771H Brassica oleracea HOM05D003196 ORTHO05D003543 7.3e-08 60.8 107 43.0
Eucgr.F03128 Eucalyptus grandis HOM05D003196 ORTHO05D003543 7.3e-08 60.8 101 40.6
TAR624G0259 Trochodendron aralioides HOM05D003196 ORTHO05D003543 7.3e-08 60.8 100 37.0
CSS0003677 Camellia sinensis var. sinensis HOM05D003196 ORTHO05D003543 9.6e-08 60.5 100 39.0
Lj3g0010265 Lotus japonicus HOM05D003196 ORTHO05D003543 9.6e-08 60.5 95 41.1
Phvul.010G139500 Phaseolus vulgaris HOM05D003196 ORTHO05D003543 1.3e-07 60.1 113 38.1
Sc15g0000110 Simmondsia chinensis HOM05D003196 ORTHO05D003543 1.6e-07 59.7 105 40.0
PGSC0003DMG400002500 Solanum tuberosum HOM05D003196 ORTHO05D003543 1.6e-07 59.7 108 36.1
TWI75G0934 Tripterygium wilfordii HOM05D003196 ORTHO05D003543 1.6e-07 59.7 98 46.9
TWI79G1769 Tripterygium wilfordii HOM05D003196 ORTHO05D003543 2.1e-07 59.3 98 45.9
Aqoxy7G01222 Aquilegia oxysepala HOM05D003196 ORTHO05D003543 2.8e-07 58.9 103 38.8
CSS0004116 Camellia sinensis var. sinensis HOM05D003196 ORTHO05D003543 2.8e-07 58.9 100 38.0
Psat4g192760 Pisum sativum HOM05D003196 ORTHO05D003543 2.8e-07 58.9 113 37.2
Sed0023272 Sechium edule HOM05D003196 ORTHO05D003543 2.8e-07 58.9 99 38.4
Hund18725 Selenicereus undatus HOM05D003196 ORTHO05D003543 3.6e-07 58.5 106 37.7
BcaC08g44178 Brassica carinata HOM05D003196 ORTHO05D003543 4.8e-07 58.2 105 39.0
BraA05t20658Z Brassica rapa HOM05D003196 ORTHO05D003543 4.8e-07 58.2 107 39.3
Haze_15942 Corylus avellana HOM05D003196 ORTHO05D003543 8.1e-07 57.4 49 61.2
Atru.chr1.3680 Acer truncatum HOM05D003196 ORTHO05D003543 1.1e-06 57.0 93 43.0
PSO063G3162 Papaver somniferum HOM05D003196 ORTHO05D003543 1.4e-06 56.6 102 36.3
Ciclev10026551m.g Citrus clementina HOM05D003196 ORTHO05D003543 2.4e-06 55.8 99 37.4
Gohir.A10G060800 Gossypium hirsutum HOM05D003196 ORTHO05D003543 2.4e-06 55.8 98 37.8
Manes.11G027100 Manihot esculenta HOM05D003196 ORTHO05D003543 2.4e-06 55.8 113 37.2
Medtr8g016220 Medicago truncatula HOM05D003196 ORTHO05D003543 2.4e-06 55.8 106 35.8
AT1G55160 Arabidopsis thaliana HOM05D003196 ORTHO05D003543 3.1e-06 55.5 98 42.9
Nitab4.5_0003218g0010 Nicotiana tabacum HOM05D003196 ORTHO05D003543 3.1e-06 55.5 104 41.3
DCAR_016165 Daucus carota HOM05D003196 ORTHO05D003543 4.0e-06 55.1 118 35.6
PSO832G1719 Papaver somniferum HOM05D003196 ORTHO05D003543 4.0e-06 55.1 102 35.3
Glyma.07G010600 Glycine max HOM05D003196 ORTHO05D003543 5.3e-06 54.7 110 34.5
Nn8g38879 Nelumbo nucifera HOM05D003196 ORTHO05D003543 5.3e-06 54.7 102 37.3
Nitab4.5_0007137g0040 Nicotiana tabacum HOM05D003196 ORTHO05D003543 5.3e-06 54.7 99 37.4


User provided reference genes

Program Settings