Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p024803 Quercus lobata HOM05D001775 ORTHO05D009111 8.9e-69 263.5 132 100.0
QL02p015424 Quercus lobata HOM05D001775 ORTHO05D009111 2.4e-50 202.2 102 97.1
Cfa014122 Carpinus fangiana HOM05D001775 ORTHO05D009111 6.7e-48 194.1 103 89.3
Haze_22843 Corylus avellana HOM05D001775 ORTHO05D009111 6.7e-48 194.1 103 89.3
Rhsim07G0257200 Rhododendron simsii HOM05D001775 ORTHO05D009111 5.6e-47 191.0 103 89.3
Lj4C811T3 Lonicera japonica HOM05D001775 ORTHO05D009111 7.4e-47 190.7 103 89.3
Actinidia37910 Actinidia chinensis HOM05D001775 ORTHO05D009111 9.6e-47 190.3 103 85.4
TAR628G0795 Trochodendron aralioides HOM05D002588 ORTHO05D002979 1.3e-46 189.9 103 88.3
CiPaw.07G135100 Carya illinoinensis HOM05D001775 ORTHO05D009111 2.8e-46 188.7 102 89.2
Manes.05G125700 Manihot esculenta HOM05D001775 ORTHO05D009111 3.7e-46 188.3 103 87.4
MELO3C017046.2 Cucumis melo HOM05D001775 ORTHO05D009111 4.8e-46 188.0 101 89.1
CsaV3_4G037510 Cucumis sativus L. HOM05D001775 ORTHO05D009111 4.8e-46 188.0 101 89.1
Ciclev10002424m.g Citrus clementina HOM05D001775 ORTHO05D009111 1.1e-45 186.8 103 83.5
vmacro04420 Vaccinium macrocarpon HOM05D001775 ORTHO05D009111 1.1e-45 186.8 115 77.4
Cpa.g.sc26.153 Carica papaya HOM05D001775 ORTHO05D009111 1.4e-45 186.4 102 87.3
Peaxi162Scf00680g00417 Petunia axillaris HOM05D001775 ORTHO05D009111 1.4e-45 186.4 103 83.5
Thecc.08G063800 Theobroma cacao HOM05D001775 ORTHO05D009111 2.4e-45 185.7 102 88.2
COL.COLO4_37860 Corchorus olitorius HOM05D001775 ORTHO05D009111 3.1e-45 185.3 102 87.3
arahy.Tifrunner.gnm1.ann1.F3SGCQ Arachis hypogaea HOM05D001775 ORTHO05D009111 4.0e-45 184.9 115 79.1
arahy.Tifrunner.gnm1.ann1.LVT2R8 Arachis hypogaea HOM05D001775 ORTHO05D009111 4.0e-45 184.9 115 79.1
Solyc04g082660.2 Solanum lycopersicum HOM05D001775 ORTHO05D009111 5.3e-45 184.5 103 83.5
Sopen04g036290 Solanum pennellii HOM05D001775 ORTHO05D009111 5.3e-45 184.5 103 83.5
PGSC0003DMG400009916 Solanum tuberosum HOM05D001775 ORTHO05D009111 5.3e-45 184.5 103 83.5
Gohir.A01G102700 Gossypium hirsutum HOM05D001775 ORTHO05D009111 6.9e-45 184.1 102 86.3
Gorai.002G113700 Gossypium raimondii HOM05D001775 ORTHO05D009111 6.9e-45 184.1 102 86.3
Prupe.5G007000 Prunus persica HOM05D001775 ORTHO05D009111 9.0e-45 183.7 103 83.5
Sed0011537 Sechium edule HOM05D001775 ORTHO05D009111 9.0e-45 183.7 101 87.1
Nitab4.5_0001756g0210 Nicotiana tabacum HOM05D001775 ORTHO05D009111 1.2e-44 183.3 103 82.5
Sc26g0004700 Simmondsia chinensis HOM05D001775 ORTHO05D009111 1.2e-44 183.3 102 83.3
CAN.G2106.1 Capsicum annuum HOM05D001775 ORTHO05D009111 1.5e-44 183.0 102 83.3
CSS0014569 Camellia sinensis var. sinensis HOM05D001775 ORTHO05D009111 2.0e-44 182.6 104 82.7
Gohir.D01G088000 Gossypium hirsutum HOM05D001775 ORTHO05D009111 2.0e-44 182.6 102 85.3
Medtr3g115970 Medicago truncatula HOM05D001775 ORTHO05D009111 2.0e-44 182.6 102 84.3
Lj1g0018680 Lotus japonicus HOM05D001775 ORTHO05D009111 2.6e-44 182.2 102 81.4
Phvul.009G007100 Phaseolus vulgaris HOM05D001775 ORTHO05D009111 2.6e-44 182.2 102 82.4
Ca_29626_v3 Cicer arietinum L. HOM05D002588 ORTHO05D002979 3.4e-44 181.8 102 83.3
Oeu016875.3 Olea europaea HOM05D001775 ORTHO05D009111 3.4e-44 181.8 103 83.5
Potri.005G254900 Populus trichocarpa HOM05D001775 ORTHO05D009111 3.4e-44 181.8 102 84.3
VMungo1309G0131 Vigna mungo HOM05D001775 ORTHO05D009111 3.4e-44 181.8 102 82.4
Aqoxy5G00975 Aquilegia oxysepala HOM05D001775 ORTHO05D009111 4.5e-44 181.4 103 82.5
Hma1.2p1_0612F.1_g188980 Hydrangea macrophylla HOM05D001775 ORTHO05D009111 7.6e-44 180.6 103 82.5
Nn5g27670 Nelumbo nucifera HOM05D001775 ORTHO05D009111 7.6e-44 180.6 103 83.5
Duzib116G0437 Durio zibethinus HOM05D001775 ORTHO05D009111 1.0e-43 180.3 102 83.3
Glyma.04G015400 Glycine max HOM05D001775 ORTHO05D009111 1.0e-43 180.3 102 82.4
MSTRG.998 Avicennia marina HOM05D001775 ORTHO05D009111 2.2e-43 179.1 102 82.4
CDE04G0169 Ceratophyllum demersum HOM05D001775 ORTHO05D009111 2.2e-43 179.1 104 82.7
Cc10_g00360 Coffea canephora HOM05D001775 ORTHO05D009111 2.2e-43 179.1 102 82.4
Lsat_1_v5_gn_2_1300 Lactuca sativa HOM05D001775 ORTHO05D009111 2.2e-43 179.1 104 79.8
MD06G1005700 Malus domestica HOM05D001775 ORTHO05D009111 2.2e-43 179.1 102 82.4
PGR083G0637 Punica granatum HOM05D001775 ORTHO05D009111 2.2e-43 179.1 102 82.4
CiPaw.08G076300 Carya illinoinensis HOM05D001775 ORTHO05D009111 2.9e-43 178.7 102 84.3
RcHm_v2.0_Chr7g0216351 Rosa chinensis HOM05D001775 ORTHO05D009111 2.9e-43 178.7 103 81.6
GSVIVG01013409001 Vitis vinifera HOM05D001775 ORTHO05D009111 3.8e-43 178.3 102 82.4
FAN13G0876 Fragaria x ananassa HOM05D001775 ORTHO05D009111 6.5e-43 177.6 103 79.6
Zm00001eb209360 Zea mays HOM05D001775 ORTHO05D009111 6.5e-43 177.6 102 84.3
FvH4_5g25880 Fragaria vesca HOM05D001775 ORTHO05D009111 8.4e-43 177.2 102 80.4
PSO170G2582 Papaver somniferum HOM05D001775 ORTHO05D009111 8.4e-43 177.2 103 80.6
THA.LOC104813746 Tarenaya hassleriana HOM05D001775 ORTHO05D009111 1.1e-42 176.8 102 82.4
ECA238G3840 Erigeron canadensis HOM05D001775 ORTHO05D009111 1.4e-42 176.4 103 78.6
Migut.C00375 Erythranthe guttata HOM05D001775 ORTHO05D009111 1.4e-42 176.4 102 81.4
FAN08G0029 Fragaria x ananassa HOM05D001775 ORTHO05D009111 1.4e-42 176.4 103 78.6
Psat5g008920 Pisum sativum HOM05D001775 ORTHO05D009111 1.4e-42 176.4 102 81.4
SGA_v2.0_scaffold133G34596 Striga asiatica HOM05D001775 ORTHO05D009111 1.4e-42 176.4 98 85.7
TWI12G0704 Tripterygium wilfordii HOM05D001775 ORTHO05D009111 1.4e-42 176.4 102 81.4
Hund05086 Selenicereus undatus HOM05D001775 ORTHO05D009111 1.9e-42 176.0 112 77.7
Lalb_Chr11g0061421 Lupinus albus HOM05D001775 ORTHO05D009111 2.5e-42 175.6 102 80.4
PSO210G1579 Papaver somniferum HOM05D001775 ORTHO05D009111 2.5e-42 175.6 103 79.6
TPR.G38162 Trifolium pratense HOM05D001775 ORTHO05D009111 2.5e-42 175.6 103 80.6
Carub.0001s2026 Capsella rubella HOM05D001775 ORTHO05D009111 5.5e-42 174.5 102 80.4
AL1G33810 Arabidopsis lyrata HOM05D001775 ORTHO05D009111 7.1e-42 174.1 102 80.4
ClCG11G018910 Citrullus lanatus HOM05D001775 ORTHO05D009111 7.1e-42 174.1 116 75.9
Os02g0117600 Oryza sativa ssp. japonica HOM05D001775 ORTHO05D009111 7.1e-42 174.1 102 80.4
HanXRQChr06g0185251 Helianthus annuus HOM05D001775 ORTHO05D009111 1.2e-41 173.3 100 81.0
AT1G20810 Arabidopsis thaliana HOM05D001775 ORTHO05D009111 2.1e-41 172.6 102 79.4
BcaB07g32073 Brassica carinata HOM05D001775 ORTHO05D009111 2.1e-41 172.6 102 80.4
A06p16800 Brassica napus HOM05D001775 ORTHO05D009111 2.1e-41 172.6 102 80.4
BraA06t24787Z Brassica rapa HOM05D001775 ORTHO05D009111 2.1e-41 172.6 102 80.4
BcaC05g25982 Brassica carinata HOM05D001775 ORTHO05D009111 2.7e-41 172.2 115 74.8
C05p19360 Brassica napus HOM05D001775 ORTHO05D009111 2.7e-41 172.2 115 74.8
CARHR021230 Cardamine hirsuta HOM05D001775 ORTHO05D009111 2.7e-41 172.2 102 79.4
Thhalv10008601m.g Eutrema salsugineum HOM05D001775 ORTHO05D009111 3.5e-41 171.8 102 78.4
Atru.chr13.83 Acer truncatum HOM05D001775 ORTHO05D009111 4.6e-41 171.4 102 82.4
Sp1g18500 Schrenkiella parvula HOM05D001775 ORTHO05D009111 4.6e-41 171.4 102 78.4
Ah.00g001110 Amaranthus hybridus HOM05D001775 ORTHO05D009111 6.0e-41 171.0 103 76.7
MBI05_g05759_MAGBIO Magnolia biondii HOM05D001775 ORTHO05D009111 6.0e-41 171.0 103 79.6
TAR376G0612 Trochodendron aralioides HOM05D001775 ORTHO05D009111 6.0e-41 171.0 106 82.1
AUR62024106 Chenopodium quinoa HOM05D001775 ORTHO05D009111 1.3e-40 169.9 103 77.7
SEGI_26708 Sequoiadendron giganteum HOM05D001775 ORTHO05D009111 1.3e-40 169.9 104 77.9
Aa31LG7G4970 Aethionema arabicum HOM05D001775 ORTHO05D009111 3.0e-40 168.7 102 78.4
EL10Ac1g01883 Beta vulgaris HOM05D001775 ORTHO05D009111 3.9e-40 168.3 102 77.5
ATR0807G105 Amborella trichopoda HOM05D001775 ORTHO05D009111 8.7e-40 167.2 103 79.6
BcaB03g16041 Brassica carinata HOM05D001775 ORTHO05D009111 1.5e-39 166.4 101 78.2
AUR62035158 Chenopodium quinoa HOM05D001775 ORTHO05D009111 4.3e-39 164.9 123 68.3
Sabra05G0197400 Salix brachista HOM05D001775 ORTHO05D009111 4.3e-39 164.9 102 79.4
Gohir.A01G103050 Gossypium hirsutum HOM05D001775 ORTHO05D009111 5.3e-37 157.9 86 87.2
Pp3c25_1450 Physcomitrium patens HOM05D001775 ORTHO05D009111 3.4e-36 155.2 101 71.3
SMO347G0534 Selaginella moellendorffii HOM05D001775 ORTHO05D009111 5.0e-35 151.4 105 67.6
Eucgr.F01800 Eucalyptus grandis HOM05D001775 ORTHO05D009111 1.9e-34 149.4 94 77.7
DCAR_016791 Daucus carota HOM05D000190 ORTHO05D000113 3.6e-33 145.2 80 85.0
FAN04G3097 Fragaria x ananassa HOM05D001775 ORTHO05D009111 2.3e-32 142.5 103 68.0
AagrBONN_evm.TU.Sc2ySwM_344.2743 Anthoceros agrestis HOM05D001775 ORTHO05D009111 3.1e-29 132.1 102 58.8
A08p29230 Brassica napus HOM05D001775 ORTHO05D009111 6.9e-29 131.0 86 72.1
BraA08t34858Z Brassica rapa HOM05D001775 ORTHO05D009111 6.9e-29 131.0 86 72.1
Oeu019571.1 Olea europaea HOM05D001775 ORTHO05D009111 2.7e-25 119.0 117 57.3
SEGI_27526 Sequoiadendron giganteum HOM05D001775 ORTHO05D009111 4.4e-23 111.7 77 68.8
Eucgr.F01795 Eucalyptus grandis HOM05D001775 ORTHO05D009111 6.1e-17 91.3 56 75.0
Cre10.g466850 Chlamydomonas reinhardtii HOM05D001775 ORTHO05D009111 3.0e-16 89.0 104 42.3
TPR.G35796 Trifolium pratense HOM05D001775 ORTHO05D009111 1.5e-15 86.7 48 81.2
Ca_06247_v3 Cicer arietinum L. HOM05D001775 ORTHO05D009111 1.1e-13 80.5 50 72.0
MCO01G739 Micromonas commoda HOM05D001775 ORTHO05D009111 2.1e-09 66.2 67 44.8
HPP92_015207 Vanilla planifolia HOM05D001775 ORTHO05D009111 8.0e-09 64.3 62 56.5


User provided reference genes

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