Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p024561 Quercus lobata HOM05D003400 ORTHO05D003687 5.3e-191 671.0 379 100.0
CiPaw.13G063500 Carya illinoinensis HOM05D003400 ORTHO05D003687 1.7e-91 340.5 367 56.1
Haze_24472 Corylus avellana HOM05D003400 ORTHO05D003687 6.5e-88 328.6 361 56.0
TAR369G0853 Trochodendron aralioides HOM05D003400 ORTHO05D003687 4.3e-55 219.5 392 40.1
Actinidia13648 Actinidia chinensis HOM05D003400 ORTHO05D003687 2.8e-54 216.9 398 40.5
GSVIVG01032673001 Vitis vinifera HOM05D003400 ORTHO05D003687 2.8e-54 216.9 366 41.8
TAR633G0453 Trochodendron aralioides HOM05D003400 ORTHO05D003687 8.0e-54 215.3 396 41.4
TAR623G0519 Trochodendron aralioides HOM05D003400 ORTHO05D003687 5.8e-52 209.1 400 39.8
Nn2g10302 Nelumbo nucifera HOM05D003400 ORTHO05D003687 3.2e-50 203.4 393 40.5
Actinidia07793 Actinidia chinensis HOM05D003400 ORTHO05D003687 6.6e-48 195.7 372 40.3
CSS0037757 Camellia sinensis var. sinensis HOM05D003400 ORTHO05D003687 8.6e-48 195.3 394 37.6
Aqoxy4G02422 Aquilegia oxysepala HOM05D003400 ORTHO05D003687 1.5e-47 194.5 370 37.8
Actinidia31626 Actinidia chinensis HOM05D003400 ORTHO05D003687 4.3e-47 193.0 385 40.0
Dinv21846 Davidia involucrata HOM05D003400 ORTHO05D003687 1.2e-46 191.4 417 37.9
CiPaw.01G306600 Carya illinoinensis HOM05D003400 ORTHO05D003687 3.6e-46 189.9 379 38.8
Hma1.2p1_0264F.1_g106160 Hydrangea macrophylla HOM05D003400 ORTHO05D003687 1.1e-45 188.3 391 38.4
Lj1g0015659 Lotus japonicus HOM05D003400 ORTHO05D003687 1.4e-45 188.0 394 37.3
Manes.10G001400 Manihot esculenta HOM05D003400 ORTHO05D003687 2.3e-45 187.2 385 36.9
Rhsim09G0185900 Rhododendron simsii HOM05D003400 ORTHO05D003687 8.9e-45 185.3 365 39.2
Thecc.10G181000 Theobroma cacao HOM05D003400 ORTHO05D003687 1.2e-44 184.9 385 37.4
ClCG07G005110 Citrullus lanatus HOM05D003400 ORTHO05D003687 2.0e-44 184.1 388 35.6
Cc02_g05370 Coffea canephora HOM05D003400 ORTHO05D003687 2.6e-44 183.7 400 38.5
Atru.chr12.183 Acer truncatum HOM05D003400 ORTHO05D003687 3.4e-44 183.3 378 36.8
Nn5g26847 Nelumbo nucifera HOM05D003400 ORTHO05D003687 3.4e-44 183.3 398 37.7
arahy.Tifrunner.gnm1.ann1.45IBUQ Arachis hypogaea HOM05D003400 ORTHO05D003687 7.5e-44 182.2 362 36.5
arahy.Tifrunner.gnm1.ann1.JMN63H Arachis hypogaea HOM05D003400 ORTHO05D003687 9.8e-44 181.8 362 36.5
vmacro09957 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 2.2e-43 180.6 374 37.4
Gohir.A05G403000 Gossypium hirsutum HOM05D003400 ORTHO05D003687 3.7e-43 179.9 407 36.4
MELO3C020148.2 Cucumis melo HOM05D003400 ORTHO05D003687 8.3e-43 178.7 393 36.1
Prupe.2G264100 Prunus persica HOM05D003400 ORTHO05D003687 8.3e-43 178.7 386 36.5
DCAR_018037 Daucus carota HOM05D003400 ORTHO05D003687 1.1e-42 178.3 378 35.4
MD01G1167700 Malus domestica HOM05D003400 ORTHO05D003687 1.1e-42 178.3 385 35.8
CsaV3_5G010950 Cucumis sativus L. HOM05D003400 ORTHO05D003687 1.4e-42 177.9 400 35.5
Phvul.001G062900 Phaseolus vulgaris HOM05D003400 ORTHO05D003687 1.4e-42 177.9 376 36.7
Gorai.012G014800 Gossypium raimondii HOM05D003400 ORTHO05D003687 1.9e-42 177.6 408 36.0
CANSAT21G1871 Cannabis sativa HOM05D003400 ORTHO05D003687 3.2e-42 176.8 381 37.5
Gohir.D04G012500 Gossypium hirsutum HOM05D003400 ORTHO05D003687 3.2e-42 176.8 408 36.0
Ciclev10030981m.g Citrus clementina HOM05D003400 ORTHO05D003687 4.1e-42 176.4 424 34.7
AUR62030610 Chenopodium quinoa HOM05D003400 ORTHO05D003687 9.2e-42 175.3 391 36.1
Duzib114G0186 Durio zibethinus HOM05D003400 ORTHO05D003687 9.2e-42 175.3 407 35.6
Lalb_Chr24g0402681 Lupinus albus HOM05D003400 ORTHO05D003687 9.2e-42 175.3 381 36.0
VMungo0647G2516 Vigna mungo HOM05D003400 ORTHO05D003687 9.2e-42 175.3 377 36.9
QL08p064852 Quercus lobata HOM05D003400 ORTHO05D003687 1.2e-41 174.9 382 37.2
Lj8C54T21 Lonicera japonica HOM05D003400 ORTHO05D003687 1.6e-41 174.5 362 37.3
COL.COLO4_19367 Corchorus olitorius HOM05D003400 ORTHO05D003687 4.6e-41 172.9 391 35.8
Potri.019G058200 Populus trichocarpa HOM05D003400 ORTHO05D003687 7.8e-41 172.2 397 35.0
AUR62024934 Chenopodium quinoa HOM05D003400 ORTHO05D003687 1.3e-40 171.4 392 35.5
PSO017G2438 Papaver somniferum HOM05D003400 ORTHO05D003687 1.3e-40 171.4 385 34.8
PSO170G4360 Papaver somniferum HOM05D003400 ORTHO05D003687 1.3e-40 171.4 369 36.9
MD07G1233700 Malus domestica HOM05D003400 ORTHO05D003687 1.7e-40 171.0 372 36.6
Manes.07G141701 Manihot esculenta HOM05D003400 ORTHO05D003687 2.3e-40 170.6 385 35.3
Manes.07G143400 Manihot esculenta HOM05D003400 ORTHO05D003687 2.3e-40 170.6 383 34.7
Glyma.14G117500 Glycine max HOM05D003400 ORTHO05D003687 3.0e-40 170.2 385 36.4
Sed0002948 Sechium edule HOM05D003400 ORTHO05D003687 3.9e-40 169.9 383 35.2
MBI03_g15591_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 6.6e-40 169.1 358 36.3
Eucgr.J00113 Eucalyptus grandis HOM05D003400 ORTHO05D003687 8.6e-40 168.7 385 35.6
CANSAT21G0473 Cannabis sativa HOM05D003400 ORTHO05D003687 1.1e-39 168.3 376 36.4
Lj1C967G2 Lonicera japonica HOM05D003400 ORTHO05D003687 1.1e-39 168.3 352 36.9
Nitab4.5_0002745g0010 Nicotiana tabacum HOM05D003400 ORTHO05D003687 1.1e-39 168.3 366 37.2
Hma1.2p1_0292F.1_g115970 Hydrangea macrophylla HOM05D003400 ORTHO05D003687 1.9e-39 167.5 374 36.4
PGR044G0713 Punica granatum HOM05D003400 ORTHO05D003687 1.9e-39 167.5 380 36.6
Sabra19G0073600 Salix brachista HOM05D003400 ORTHO05D003687 2.5e-39 167.2 383 34.7
Ca_03351_v3 Cicer arietinum L. HOM05D003400 ORTHO05D003687 4.3e-39 166.4 371 36.1
MBI15_g01598_MAGBIO Magnolia biondii HOM05D003400 ORTHO05D003687 4.3e-39 166.4 372 36.8
TWI09G1099 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 4.3e-39 166.4 402 36.6
EL10Ac2g02645 Beta vulgaris HOM05D003400 ORTHO05D003687 5.6e-39 166.0 395 33.2
FAN10G0615 Fragaria x ananassa HOM05D003400 ORTHO05D003687 7.3e-39 165.6 412 33.7
Psat6g036400 Pisum sativum HOM05D003400 ORTHO05D003687 7.3e-39 165.6 373 37.8
TWI53G0017 Tripterygium wilfordii HOM05D003400 ORTHO05D003687 9.5e-39 165.2 405 36.5
Sopen06g015320 Solanum pennellii HOM05D003400 ORTHO05D003687 1.2e-38 164.9 400 34.0
PGSC0003DMG400016640 Solanum tuberosum HOM05D003400 ORTHO05D003687 2.1e-38 164.1 400 33.8
FvH4_7g25930 Fragaria vesca HOM05D003400 ORTHO05D003687 2.8e-38 163.7 415 33.5
FAN03G2499 Fragaria x ananassa HOM05D003400 ORTHO05D003687 8.1e-38 162.2 412 33.5
Cpa.g.sc19.58 Carica papaya HOM05D003400 ORTHO05D003687 1.1e-37 161.8 394 34.3
Nitab4.5_0000171g0020 Nicotiana tabacum HOM05D003400 ORTHO05D003687 1.1e-37 161.8 366 36.1
RcHm_v2.0_Chr1g0372301 Rosa chinensis HOM05D003400 ORTHO05D003687 1.1e-37 161.8 415 34.0
Haze_17357 Corylus avellana HOM05D003400 ORTHO05D003687 1.4e-37 161.4 392 36.2
FAN06G1869 Fragaria x ananassa HOM05D003400 ORTHO05D003687 1.8e-37 161.0 415 33.3
Glyma.17G191500 Glycine max HOM05D003400 ORTHO05D003687 1.8e-37 161.0 369 35.5
FAN01G0709 Fragaria x ananassa HOM05D003400 ORTHO05D003687 2.3e-37 160.6 407 33.7
Solyc06g048970.3 Solanum lycopersicum HOM05D003400 ORTHO05D003687 3.1e-37 160.2 400 33.5
Gohir.D05G280400 Gossypium hirsutum HOM05D003400 ORTHO05D003687 4.0e-37 159.8 386 33.4
Gorai.009G293800 Gossypium raimondii HOM05D003400 ORTHO05D003687 4.0e-37 159.8 386 33.9
Lalb_Chr22g0360931 Lupinus albus HOM05D003400 ORTHO05D003687 4.0e-37 159.8 375 34.1
Peaxi162Scf00739g00321 Petunia axillaris HOM05D003400 ORTHO05D003687 4.0e-37 159.8 386 35.8
MSTRG.8889 Avicennia marina HOM05D003400 ORTHO05D003687 1.2e-36 158.3 403 33.5
Hund15817 Selenicereus undatus HOM05D003400 ORTHO05D003687 1.2e-36 158.3 391 33.8
Duzib106G2049 Durio zibethinus HOM05D003400 ORTHO05D003687 1.5e-36 157.9 421 34.0
TPR.G24491 Trifolium pratense HOM05D003400 ORTHO05D003687 2.0e-36 157.5 366 36.3
Medtr1g007460 Medicago truncatula HOM05D003400 ORTHO05D003687 2.6e-36 157.1 363 35.0
CAN.G24.15 Capsicum annuum HOM05D003400 ORTHO05D003687 4.4e-36 156.4 379 34.0
Ca_12768_v3 Cicer arietinum L. HOM05D003400 ORTHO05D003687 2.2e-35 154.1 349 33.8
SalBow3G2848 Salvia bowleyana HOM05D003400 ORTHO05D003687 4.9e-35 152.9 391 33.8
Lsat_1_v5_gn_9_60041 Lactuca sativa HOM05D003400 ORTHO05D003687 1.1e-34 151.8 364 35.7
DCAR_029743 Daucus carota HOM05D000792 ORTHO05D004195 1.4e-34 151.4 362 34.3
Oeu063984.1 Olea europaea HOM05D003400 ORTHO05D003687 1.4e-34 151.4 381 34.6
PSO384G0897 Papaver somniferum HOM05D003400 ORTHO05D003687 1.4e-34 151.4 403 30.8
Os02g0132200 Oryza sativa ssp. japonica HOM05D003400 ORTHO05D003687 1.9e-34 151.0 371 34.2
SGA_v2.0_scaffold44G16620 Striga asiatica HOM05D003400 ORTHO05D003687 1.9e-34 151.0 360 34.4
Migut.F00607 Erythranthe guttata HOM05D003400 ORTHO05D003687 4.1e-34 149.8 367 34.1
Rhsim03G0152500 Rhododendron simsii HOM05D003400 ORTHO05D003687 9.2e-34 148.7 412 33.0
HanXRQChr08g0221571 Helianthus annuus HOM05D003400 ORTHO05D003687 1.2e-33 148.3 353 37.4
THA.LOC104823169 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 1.2e-33 148.3 376 32.2
THA.LOC104816509 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 3.5e-33 146.7 381 32.8
SGA_v2.0_scaffold60G20888 Striga asiatica HOM05D003400 ORTHO05D003687 1.3e-32 144.8 360 34.2
ECA232G0413 Erigeron canadensis HOM05D003400 ORTHO05D003687 5.1e-32 142.9 353 36.3
Migut.F01244 Erythranthe guttata HOM05D003400 ORTHO05D003687 5.1e-32 142.9 349 35.2
C09p71460 Brassica napus HOM05D003400 ORTHO05D003687 1.1e-31 141.7 379 32.7
CDE04G0272 Ceratophyllum demersum HOM05D003400 ORTHO05D003687 1.5e-31 141.4 373 33.8
BolC9t59909H Brassica oleracea HOM05D003400 ORTHO05D003687 1.9e-31 141.0 379 32.7
MSTRG.171 Avicennia marina HOM05D003400 ORTHO05D003687 2.5e-31 140.6 391 34.5
Gohir.A05G278600 Gossypium hirsutum HOM05D003400 ORTHO05D003687 2.5e-31 140.6 363 33.1
Thhalv10013224m.g Eutrema salsugineum HOM05D003400 ORTHO05D003687 3.3e-31 140.2 376 31.4
PSO339G6613 Papaver somniferum HOM05D003400 ORTHO05D003687 3.3e-31 140.2 403 29.3
Hund13449 Selenicereus undatus HOM05D003400 ORTHO05D003687 3.3e-31 140.2 381 33.1
DCAR_020152 Daucus carota HOM05D003400 ORTHO05D003687 4.3e-31 139.8 362 32.0
EL10Ac3g07235 Beta vulgaris HOM05D003400 ORTHO05D003687 5.6e-31 139.4 423 30.3
Zm00001eb231310 Zea mays HOM05D003400 ORTHO05D003687 7.3e-31 139.0 370 31.1
Sp6g37590 Schrenkiella parvula HOM05D003400 ORTHO05D003687 2.8e-30 137.1 379 31.7
AT5G05240 Arabidopsis thaliana HOM05D003400 ORTHO05D003687 6.2e-30 136.0 376 31.1
A10p30950 Brassica napus HOM05D003400 ORTHO05D003687 8.1e-30 135.6 382 31.7
BraA10t45140Z Brassica rapa HOM05D003400 ORTHO05D003687 8.1e-30 135.6 382 31.7
vmacro06891 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 8.1e-30 135.6 403 32.3
Carub.0006s0417 Capsella rubella HOM05D003400 ORTHO05D003687 1.4e-29 134.8 387 30.0
CARHR207990 Cardamine hirsuta HOM05D003400 ORTHO05D003687 2.4e-29 134.0 382 29.3
Sed0014609 Sechium edule HOM05D003400 ORTHO05D003687 2.4e-29 134.0 388 33.2
BcaC06g32233 Brassica carinata HOM05D003400 ORTHO05D003687 4.0e-29 133.3 370 32.7
BcaB05g21725 Brassica carinata HOM05D003400 ORTHO05D003687 2.0e-28 131.0 376 30.3
Rhsim03G0152100 Rhododendron simsii HOM05D003400 ORTHO05D003687 3.4e-28 130.2 397 31.2
AL6G15080 Arabidopsis lyrata HOM05D003400 ORTHO05D003687 7.6e-28 129.0 380 30.0
BraA02t04839Z Brassica rapa HOM05D003400 ORTHO05D003687 9.9e-28 128.6 377 29.2
Dinv34484 Davidia involucrata HOM05D003400 ORTHO05D003687 9.9e-28 128.6 356 31.2
Lsat_1_v5_gn_8_11440 Lactuca sativa HOM05D003400 ORTHO05D003687 1.7e-27 127.9 362 33.4
Actinidia01001 Actinidia chinensis HOM05D003400 ORTHO05D003687 3.8e-27 126.7 207 44.9
BcaC03g13153 Brassica carinata HOM05D003400 ORTHO05D003687 1.1e-26 125.2 360 31.1
TAR636G2149 Trochodendron aralioides HOM05D003400 ORTHO05D003687 1.4e-26 124.8 121 57.0
Potri.013G091100 Populus trichocarpa HOM05D003400 ORTHO05D003687 1.9e-26 124.4 375 31.5
C02p02230 Brassica napus HOM05D003400 ORTHO05D003687 2.4e-26 124.0 369 29.8
BolC2t06192H Brassica oleracea HOM05D003400 ORTHO05D003687 2.4e-26 124.0 361 30.2
ECA233G0468 Erigeron canadensis HOM05D003400 ORTHO05D003687 2.4e-26 124.0 358 31.8
Aa31LG3G1490 Aethionema arabicum HOM05D003400 ORTHO05D003687 6.0e-25 119.4 383 32.9
Aa31LG11G6090 Aethionema arabicum HOM05D003400 ORTHO05D003687 1.7e-24 117.9 371 29.1
Sp4g22960 Schrenkiella parvula HOM05D003400 ORTHO05D003687 1.8e-21 107.8 397 30.0
A03p22840 Brassica napus HOM05D003400 ORTHO05D003687 4.0e-21 106.7 368 30.7
Thhalv10016481m.g Eutrema salsugineum HOM05D003400 ORTHO05D003687 4.0e-21 106.7 387 30.0
C03p27090 Brassica napus HOM05D003400 ORTHO05D003687 9.0e-21 105.5 368 30.7
HPP92_024977 Vanilla planifolia HOM05D003400 ORTHO05D003687 9.0e-21 105.5 366 29.8
BcaC01g05391 Brassica carinata HOM05D003400 ORTHO05D003687 1.2e-20 105.1 368 30.7
Potri.013G157700 Populus trichocarpa HOM05D003400 ORTHO05D003687 2.0e-20 104.4 381 29.4
THA.LOC104813796 Tarenaya hassleriana HOM05D003400 ORTHO05D003687 2.6e-20 104.0 335 30.1
TAR636G0727 Trochodendron aralioides HOM05D003400 ORTHO05D003687 4.4e-20 103.2 236 32.2
Carub.0004s2292 Capsella rubella HOM05D003400 ORTHO05D003687 2.2e-19 100.9 375 29.3
AT2G40630 Arabidopsis thaliana HOM05D003400 ORTHO05D003687 1.4e-18 98.2 370 28.9
BcaB01g03526 Brassica carinata HOM05D003400 ORTHO05D003687 2.4e-18 97.4 384 28.1
AL4G38500 Arabidopsis lyrata HOM05D003400 ORTHO05D003687 1.2e-17 95.1 374 29.1
Sc14g0005640 Simmondsia chinensis HOM05D003400 ORTHO05D003687 2.7e-17 94.0 280 31.1
HanXRQChr09g0252221 Helianthus annuus HOM05D003400 ORTHO05D003687 1.0e-16 92.0 134 45.5
unitig_37.g12474 Utricularia gibba HOM05D003400 ORTHO05D003687 1.0e-16 92.0 330 29.4
ATR1127G045 Amborella trichopoda HOM05D003400 ORTHO05D003687 2.3e-16 90.9 340 27.9
Aqoxy2G00693 Aquilegia oxysepala HOM05D003400 ORTHO05D003687 5.1e-16 89.7 349 26.9
Sabra13G0126600 Salix brachista HOM05D003400 ORTHO05D003687 5.6e-15 86.3 418 26.6
CARHR135740 Cardamine hirsuta HOM05D003400 ORTHO05D003687 2.6e-12 77.4 133 36.8
Zm00001eb209040 Zea mays HOM05D003400 ORTHO05D003687 2.6e-12 77.4 144 38.9
BraA03t11508Z Brassica rapa HOM05D003400 ORTHO05D003687 3.4e-12 77.0 367 27.5
Oeu006054.1 Olea europaea HOM05D003400 ORTHO05D003687 4.5e-12 76.6 258 32.6
BraA04t18562Z Brassica rapa HOM05D003400 ORTHO05D003687 1.7e-11 74.7 127 37.0
SEGI_16914 Sequoiadendron giganteum HOM05D003400 ORTHO05D003687 1.7e-11 74.7 382 25.1
BcaB06g29158 Brassica carinata HOM05D003400 ORTHO05D003687 2.9e-11 73.9 342 26.0
A04p31060 Brassica napus HOM05D003400 ORTHO05D003687 4.9e-11 73.2 127 36.2
BcaC06g32234 Brassica carinata HOM05D003400 ORTHO05D003687 6.4e-11 72.8 104 42.3
BcaC02g07326 Brassica carinata HOM05D003400 ORTHO05D003687 1.9e-10 71.2 351 22.5
Duzib128G1678 Durio zibethinus HOM05D003400 ORTHO05D003687 2.4e-10 70.9 88 47.7
BolC4t28345H Brassica oleracea HOM05D003400 ORTHO05D003687 9.3e-10 68.9 351 22.2
MSTRG.8378 Avicennia marina HOM05D003400 ORTHO05D003687 3.5e-09 67.0 261 29.9
C04p68450 Brassica napus HOM05D003400 ORTHO05D003687 1.0e-08 65.5 127 33.9
HanXRQChr09g0240401 Helianthus annuus HOM05D003400 ORTHO05D003687 6.7e-08 62.8 85 44.7
HanXRQChr09g0253941 Helianthus annuus HOM05D003400 ORTHO05D003687 6.7e-08 62.8 85 44.7
Actinidia01000 Actinidia chinensis HOM05D003400 ORTHO05D003687 1.9e-07 61.2 81 39.5
Pp3c27_4350 Physcomitrium patens HOM05D027247 ORTHO05D003687 9.6e-07 58.9 119 37.0


User provided reference genes

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