Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 4.0e-57 224.6 116 100.0
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 4.0e-57 224.6 116 100.0
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 2.8e-42 175.3 116 80.2
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 3.7e-42 174.9 116 77.6
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 4.5e-40 167.9 116 76.7
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 1.0e-39 166.8 116 75.9
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 3.2e-38 161.8 116 74.1
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 3.2e-38 161.8 116 72.4
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 1.2e-37 159.8 116 72.4
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.2e-37 159.8 116 72.4
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.6e-37 159.5 116 71.6
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 1.6e-37 159.5 116 73.3
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 3.0e-36 155.2 115 67.0
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 1.7e-34 149.4 118 65.3
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 8.2e-34 147.1 115 64.3
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.1e-33 146.7 115 65.2
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 3.1e-33 145.2 115 63.5
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 7.0e-33 144.1 116 66.4
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 7.0e-33 144.1 115 64.3
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 1.5e-32 142.9 115 65.2
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 1.5e-32 142.9 116 67.2
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 2.6e-32 142.1 115 63.5
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 3.5e-32 141.7 116 69.8
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 5.9e-32 141.0 116 69.8
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 1.0e-31 140.2 116 66.4
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 3.8e-31 138.3 121 64.5
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 5.0e-31 137.9 117 62.4
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 5.0e-31 137.9 117 62.4
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 8.5e-31 137.1 104 69.2
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 1.1e-30 136.7 122 63.9
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 1.9e-30 136.0 114 61.4
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 4.2e-30 134.8 120 65.8
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 5.5e-30 134.4 116 65.5
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 5.5e-30 134.4 116 65.5
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 7.2e-30 134.0 116 62.9
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 8.0e-29 130.6 115 60.0
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 8.0e-29 130.6 118 66.9
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 1.0e-28 130.2 115 60.0
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 3.9e-28 128.3 115 56.5
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 3.9e-28 128.3 115 58.3
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 3.9e-28 128.3 132 56.1
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 6.7e-28 127.5 114 61.4
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 1.5e-27 126.3 120 60.0
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 9.7e-27 123.6 116 56.9
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 9.7e-27 123.6 116 63.8
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 1.3e-26 123.2 115 58.3
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 1.7e-26 122.9 119 58.8
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 2.2e-26 122.5 118 58.5
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 2.8e-26 122.1 115 59.1
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 3.7e-26 121.7 115 57.4
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 3.7e-26 121.7 123 59.3
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 3.7e-26 121.7 131 56.5
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 4.8e-26 121.3 115 57.4
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 4.8e-26 121.3 118 60.2
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 6.3e-26 120.9 118 57.6
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 6.3e-26 120.9 106 63.2
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 1.8e-25 119.4 118 58.5
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 1.8e-25 119.4 116 59.5
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 2.4e-25 119.0 120 56.7
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 7.0e-25 117.5 100 65.0
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 9.1e-25 117.1 115 53.0
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 1.2e-24 116.7 116 56.9
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 1.6e-24 116.3 116 54.3
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 2.0e-24 115.9 116 54.3
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 2.0e-24 115.9 118 55.9
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 3.5e-24 115.2 132 53.8
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 4.5e-24 114.8 116 56.0
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 1.3e-23 113.2 113 54.0
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 2.9e-23 112.1 94 60.6
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 3.8e-23 111.7 115 53.9
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 8.5e-23 110.5 117 54.7
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 2.5e-22 109.0 100 57.0
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 4.2e-22 108.2 115 53.9
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 1.2e-21 106.7 119 55.5
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 2.7e-21 105.5 115 51.3
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 3.6e-21 105.1 116 50.9
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 4.7e-21 104.8 119 52.1
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 4.7e-21 104.8 119 51.3
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 4.7e-21 104.8 119 52.1
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 8.0e-21 104.0 120 54.2
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 1.4e-20 103.2 118 50.8
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 1.8e-20 102.8 115 49.6
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 1.8e-20 102.8 118 50.8
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 4.0e-20 101.7 107 50.5
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 4.0e-20 101.7 126 48.4
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 6.8e-20 100.9 74 67.6
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 2.6e-19 99.0 116 52.6
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 4.8e-18 94.7 116 50.0
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 4.8e-18 94.7 117 49.6
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 1.4e-17 93.2 110 50.0
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 1.6e-16 89.7 115 47.0
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 2.7e-16 89.0 120 45.0
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 3.5e-16 88.6 92 54.3
Haze_25678 Corylus avellana HOM05D007094 ORTHO05D008264 7.7e-16 87.4 108 54.6
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 2.2e-15 85.9 84 56.0
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 6.5e-15 84.3 102 49.0
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 8.5e-15 84.0 94 48.9
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 3.2e-14 82.0 81 53.1
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 4.2e-14 81.6 100 49.0
Hund21962 Selenicereus undatus HOM05D007094 ORTHO05D008264 2.1e-13 79.3 203 34.5
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 3.6e-13 78.6 80 50.0
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 8.0e-13 77.4 79 49.4
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 1.0e-12 77.0 51 70.6
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 1.8e-12 76.3 118 44.9
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 3.0e-12 75.5 80 46.2
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 3.0e-12 75.5 80 46.2
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 4.0e-12 75.1 116 40.5
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 8.8e-12 73.9 145 38.6
BolC3t13146H Brassica oleracea HOM05D000282 ORTHO05D000272 2.6e-11 72.4 87 48.3
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 4.4e-11 71.6 80 45.0
Sed0018655 Sechium edule HOM05D007094 ORTHO05D008264 9.8e-11 70.5 111 48.6
DCAR_029979 Daucus carota HOM05D007094 ORTHO05D008264 3.7e-10 68.6 64 50.0
Os07g0641800 Oryza sativa ssp. japonica HOM05D007094 ORTHO05D008264 1.2e-08 63.5 50 60.0
AagrBONN_evm.TU.Sc2ySwM_368.1089 Anthoceros agrestis HOM05D007094 ORTHO05D008264 1.0e-07 60.5 130 36.2
Pp3c24_4990 Physcomitrium patens HOM05D007094 ORTHO05D008264 1.9e-06 56.2 117 33.3


User provided reference genes

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