Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 4.4e-228 794.3 398 100.0
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 1.4e-197 693.0 398 86.9
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.2e-196 689.9 399 87.0
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 1.3e-195 686.4 398 87.4
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 6.4e-187 657.5 400 81.8
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 1.2e-185 653.3 399 82.5
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.5e-183 646.4 393 83.0
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.8e-182 642.1 400 81.0
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 6.9e-181 637.5 388 82.2
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 3.4e-180 635.2 397 80.4
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.1e-178 630.2 406 79.8
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 2.4e-178 629.0 406 78.6
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 3.2e-178 628.6 394 79.7
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 4.2e-178 628.2 391 80.6
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.2e-177 626.7 402 78.9
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 3.5e-177 625.2 402 78.6
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 1.1e-175 620.2 392 79.1
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.9e-175 619.4 398 80.2
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.4e-173 612.5 398 76.1
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 3.1e-173 612.1 398 77.9
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 5.3e-173 611.3 393 79.1
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 9.0e-173 610.5 393 77.6
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.2e-172 610.1 398 78.6
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 2.0e-172 609.4 404 76.0
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 4.5e-172 608.2 401 77.8
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 5.8e-172 607.8 398 75.6
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 2.2e-171 605.9 398 75.9
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.8e-171 605.1 398 76.4
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 8.4e-171 604.0 406 77.3
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.1e-170 603.6 406 75.1
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.1e-170 603.6 401 76.8
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 5.5e-170 601.3 404 76.2
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 9.3e-170 600.5 397 75.1
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.6e-169 599.7 402 75.9
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 6.0e-169 597.8 405 75.8
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.0e-168 597.0 408 77.7
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.0e-168 597.0 408 75.0
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 6.7e-168 594.3 397 76.6
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 8.7e-168 594.0 397 76.1
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 8.7e-168 594.0 402 75.1
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.9e-167 592.8 402 75.1
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 2.5e-167 592.4 404 75.2
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 9.6e-167 590.5 397 76.1
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 1.6e-166 589.7 343 83.1
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.6e-166 589.7 352 83.5
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 2.8e-166 589.0 407 73.0
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 3.7e-166 588.6 339 84.7
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 4.8e-166 588.2 352 83.2
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.8e-166 588.2 352 83.2
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.8e-166 588.2 352 83.5
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 1.1e-165 587.0 395 74.4
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.4e-165 586.6 399 74.4
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.4e-165 585.9 414 73.2
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 3.1e-165 585.5 409 74.3
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 4.0e-165 585.1 398 75.9
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 5.3e-165 584.7 386 75.9
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 6.9e-165 584.3 385 75.3
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 1.2e-164 583.6 391 74.7
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 2.0e-164 582.8 407 72.5
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 2.0e-164 582.8 407 72.2
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 7.6e-164 580.9 386 74.1
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 3.8e-163 578.6 409 73.3
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.1e-162 577.0 388 74.7
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 3.2e-162 575.5 362 76.0
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.2e-162 575.1 392 74.0
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 4.2e-162 575.1 348 78.4
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 5.5e-162 574.7 364 75.8
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 5.5e-162 574.7 450 67.3
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 7.1e-162 574.3 367 75.5
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 9.3e-162 573.9 347 79.3
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 9.3e-162 573.9 347 79.3
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 9.3e-162 573.9 400 75.5
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 2.7e-161 572.4 374 78.6
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 2.7e-161 572.4 358 76.8
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 3.5e-161 572.0 404 73.5
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 6.1e-161 571.2 333 84.4
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 3.0e-160 568.9 347 78.4
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.1e-160 568.2 347 78.1
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.1e-160 568.2 347 78.1
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 6.7e-160 567.8 394 72.1
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 8.7e-160 567.4 347 78.4
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.9e-159 566.2 423 70.2
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 2.5e-159 565.8 368 76.4
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.3e-158 563.5 334 79.0
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 3.7e-158 562.0 434 65.9
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 2.0e-156 556.2 397 72.8
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 4.5e-156 555.1 393 73.0
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.0e-155 553.9 390 72.1
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.1e-154 550.4 366 74.0
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 1.0e-152 543.9 394 71.1
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 1.5e-151 540.0 334 77.8
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 7.4e-151 537.7 402 69.2
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 1.4e-149 533.5 299 87.3
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 6.9e-149 531.2 342 74.0
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.2e-147 526.2 384 71.4
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 6.5e-147 524.6 391 67.3
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 1.9e-146 523.1 370 73.8
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 4.7e-145 518.5 400 68.5
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 5.1e-144 515.0 438 64.8
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 1.3e-142 510.4 404 68.3
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 8.2e-142 507.7 341 76.5
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 2.3e-136 489.6 396 64.9
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 2.0e-135 486.5 370 66.8
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 4.1e-133 478.8 334 68.6
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 3.4e-127 459.1 359 63.5
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 9.7e-127 457.6 323 67.8
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 6.3e-126 454.9 309 75.1
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 7.7e-124 448.0 327 67.0
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 9.1e-117 424.5 277 79.1
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.6e-113 413.7 293 69.6
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 6.1e-113 411.8 336 64.9
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.2e-87 327.8 296 54.1
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 5.1e-83 312.4 291 52.6
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 8.6e-83 311.6 303 50.8
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.5e-82 310.8 305 56.4
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 9.9e-79 298.1 241 63.9
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 2.0e-71 273.9 181 77.3
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.4e-56 224.6 186 64.5
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.1e-50 204.9 130 73.8
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.0e-43 181.8 126 73.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.8e-33 146.4 102 68.6
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 1.7e-25 121.3 125 57.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.7e-25 120.2 103 57.3
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 9.4e-21 105.5 106 57.5
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.5e-18 98.2 106 49.1
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 2.6e-18 97.4 161 37.9
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 3.3e-18 97.1 62 74.2


User provided reference genes

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