Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p020653 Quercus lobata HOM05D000085 ORTHO05D006184 7.2e-75 283.9 148 100.0
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 4.4e-40 168.3 107 81.3
QL01p020611 Quercus lobata HOM05D000085 ORTHO05D006184 1.2e-37 160.2 107 81.3
TAR633G0957 Trochodendron aralioides HOM05D000085 ORTHO05D006184 1.5e-35 153.3 110 71.8
Actinidia24490 Actinidia chinensis HOM05D000085 ORTHO05D006184 5.4e-30 134.8 111 63.1
Manes.01G176300 Manihot esculenta HOM05D000085 ORTHO05D006184 4.6e-29 131.7 111 59.5
PSO541G3755 Papaver somniferum HOM05D000085 ORTHO05D006184 1.5e-27 126.7 109 59.6
Thecc.09G256900 Theobroma cacao HOM05D000085 ORTHO05D006184 4.7e-26 121.7 107 57.9
Duzib168G1166 Durio zibethinus HOM05D000085 ORTHO05D006184 3.1e-25 119.0 107 57.9
Potri.001G224800 Populus trichocarpa HOM05D000085 ORTHO05D006184 5.8e-24 114.8 109 59.6
MBI19_g24735_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D006184 1.3e-23 113.6 105 58.1
Aqoxy2G00032 Aquilegia oxysepala HOM05D000085 ORTHO05D006184 3.7e-23 112.1 111 54.1
Cpa.g.sc33.152 Carica papaya HOM05D000085 ORTHO05D006184 6.4e-23 111.3 106 55.7
COL.COLO4_32861 Corchorus olitorius HOM05D000085 ORTHO05D006184 1.4e-22 110.2 107 54.2
PSO675G2913 Papaver somniferum HOM05D000085 ORTHO05D006184 1.4e-22 110.2 111 53.2
Duzib128G0691 Durio zibethinus HOM05D000085 ORTHO05D006184 4.1e-22 108.6 130 48.5
TWI79G0144 Tripterygium wilfordii HOM05D000085 ORTHO05D006184 7.0e-22 107.8 111 49.5
Actinidia01698 Actinidia chinensis HOM05D000085 ORTHO05D006184 9.2e-22 107.5 99 54.5
Gohir.A07G036650 Gossypium hirsutum HOM05D000085 ORTHO05D006184 6.0e-21 104.8 108 52.8
Gohir.A10G191900 Gossypium hirsutum HOM05D000085 ORTHO05D006184 7.8e-21 104.4 106 50.0
Gorai.001G043200 Gossypium raimondii HOM05D000085 ORTHO05D006184 1.0e-20 104.0 108 52.8
Atru.chr3.2934 Acer truncatum HOM05D000003 ORTHO05D000006 1.7e-20 103.2 109 52.3
Lj2A829G58 Lonicera japonica HOM05D000085 ORTHO05D006184 2.3e-20 102.8 111 50.5
Lj9A652T57 Lonicera japonica HOM05D000085 ORTHO05D006184 2.5e-19 99.4 101 55.4
Lj6g0021794 Lotus japonicus HOM05D000085 ORTHO05D015977 2.5e-19 99.4 132 43.2
MBI19_g24736_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D006184 4.3e-19 98.6 106 54.7
Duzib114G0039 Durio zibethinus HOM05D000085 ORTHO05D006184 5.6e-19 98.2 102 51.0
Cpa.g.sc34.209 Carica papaya HOM05D000085 ORTHO05D006184 3.6e-18 95.5 105 52.4
Thecc.10G132100 Theobroma cacao HOM05D000085 ORTHO05D006184 2.3e-17 92.8 100 50.0
LjContig00564g0025361 Lotus japonicus HOM05D000085 ORTHO05D006184 6.8e-17 91.3 106 50.9
TWI63G1428 Tripterygium wilfordii HOM05D000085 ORTHO05D006184 1.2e-16 90.5 176 35.2
Potri.003G189850 Populus trichocarpa HOM05D000085 ORTHO05D006184 3.4e-16 89.0 104 48.1
PGR119G1958 Punica granatum HOM05D000085 ORTHO05D006184 4.4e-16 88.6 120 44.2
VMungo0647G1792 Vigna mungo HOM05D000085 ORTHO05D006184 4.4e-16 88.6 137 37.2
TPR.G16401 Trifolium pratense HOM05D000085 ORTHO05D006184 7.5e-16 87.8 107 48.6
Phvul.008G204900 Phaseolus vulgaris HOM05D000085 ORTHO05D006184 9.9e-16 87.4 137 38.0
Potri.001G035900 Populus trichocarpa HOM05D000085 ORTHO05D006184 9.9e-16 87.4 106 45.3
DCAR_018970 Daucus carota HOM05D000085 ORTHO05D006184 1.3e-15 87.0 109 45.9
Manes.04G153800 Manihot esculenta HOM05D000085 ORTHO05D006184 2.2e-15 86.3 106 44.3
Medtr4g128180 Medicago truncatula HOM05D000085 ORTHO05D006184 2.2e-15 86.3 105 47.6
Psat0s2703g0120 Pisum sativum HOM05D000085 ORTHO05D006184 2.9e-15 85.9 105 48.6
Hma1.2p1_1711F.1_g298710 Hydrangea macrophylla HOM05D000085 ORTHO05D006184 8.3e-15 84.3 56 75.0
Ca_13661_v3 Cicer arietinum L. HOM05D000085 ORTHO05D015977 1.9e-14 83.2 137 36.5
Ca_13663_v3 Cicer arietinum L. HOM05D000085 ORTHO05D015977 1.9e-14 83.2 137 36.5
Gorai.011G223900 Gossypium raimondii HOM05D000085 ORTHO05D006184 1.9e-14 83.2 106 42.5
Medtr0205s0040 Medicago truncatula HOM05D000085 ORTHO05D015977 2.4e-14 82.8 110 40.9
Gohir.D10G199700 Gossypium hirsutum HOM05D000085 ORTHO05D006184 5.4e-14 81.6 106 41.5
FAN03G0175 Fragaria x ananassa HOM05D000085 ORTHO05D006184 7.1e-14 81.3 105 42.9
arahy.Tifrunner.gnm1.ann1.XR6IRG Arachis hypogaea HOM05D000085 ORTHO05D015977 9.2e-14 80.9 112 42.0
FAN06G0172 Fragaria x ananassa HOM05D000085 ORTHO05D006184 1.6e-13 80.1 105 42.9
FAN06G0213 Fragaria x ananassa HOM05D000085 ORTHO05D006184 1.6e-13 80.1 105 42.9
FAN10G2237 Fragaria x ananassa HOM05D000085 ORTHO05D006184 1.6e-13 80.1 121 38.0
FAN01G1090 Fragaria x ananassa HOM05D000085 ORTHO05D006184 2.1e-13 79.7 105 42.9
Lsat_1_v5_gn_2_96380 Lactuca sativa HOM05D000085 ORTHO05D006184 2.1e-13 79.7 109 39.4
arahy.Tifrunner.gnm1.ann1.F9JT0R Arachis hypogaea HOM05D000085 ORTHO05D006184 3.5e-13 79.0 107 42.1
Dinv03760 Davidia involucrata HOM05D000085 ORTHO05D006184 4.6e-13 78.6 106 43.4
TWI38G0146 Tripterygium wilfordii HOM05D000085 ORTHO05D006184 4.6e-13 78.6 107 47.7
arahy.Tifrunner.gnm1.ann1.T5TB3S Arachis hypogaea HOM05D000085 ORTHO05D015977 1.3e-12 77.0 112 40.2
CsaV3_5G029350 Cucumis sativus L. HOM05D000085 ORTHO05D006184 1.7e-12 76.6 111 42.3
arahy.Tifrunner.gnm1.ann1.RDL00W Arachis hypogaea HOM05D000085 ORTHO05D006184 2.3e-12 76.3 107 41.1
Haze_02957 Corylus avellana HOM05D000085 ORTHO05D006184 2.3e-12 76.3 100 45.0
MELO3C011783.2 Cucumis melo HOM05D000085 ORTHO05D006184 3.0e-12 75.9 143 37.1
PGR031G0712 Punica granatum HOM05D000085 ORTHO05D006184 1.5e-11 73.6 106 42.5
VMungo1080G0919 Vigna mungo HOM05D000085 ORTHO05D006184 2.5e-11 72.8 100 44.0
Glyma.04G126000 Glycine max HOM05D000085 ORTHO05D006184 4.3e-11 72.0 106 41.5
Glyma.06G312600 Glycine max HOM05D000085 ORTHO05D006184 1.6e-10 70.1 99 40.4
VMungo1127G0217 Vigna mungo HOM05D000085 ORTHO05D006184 2.8e-10 69.3 104 40.4
DCAR_029721 Daucus carota HOM05D000085 ORTHO05D006184 8.1e-10 67.8 108 39.8
Lj1A1080T28 Lonicera japonica HOM05D000085 ORTHO05D006184 1.8e-09 66.6 154 32.5
CiPaw.13G018100 Carya illinoinensis HOM05D000085 ORTHO05D006184 2.4e-09 66.2 105 40.0
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 4.0e-09 65.5 105 37.1
PGR044G1330 Punica granatum HOM05D000085 ORTHO05D006184 4.0e-09 65.5 99 33.3
TPR.G16382 Trifolium pratense HOM05D000085 ORTHO05D006184 4.0e-09 65.5 107 36.4
Sed0020592 Sechium edule HOM05D000085 ORTHO05D006184 5.2e-09 65.1 131 35.9
Sed0014409 Sechium edule HOM05D000085 ORTHO05D006184 6.8e-09 64.7 119 37.8
Glyma.13G187600 Glycine max HOM05D000085 ORTHO05D006184 8.9e-09 64.3 145 31.7
Ca_24049_v3 Cicer arietinum L. HOM05D000085 ORTHO05D006184 4.4e-08 62.0 106 34.0
Nitab4.5_0007610g0030 Nicotiana tabacum HOM05D000085 ORTHO05D006184 4.4e-08 62.0 108 36.1
Phvul.005G013200 Phaseolus vulgaris HOM05D000085 ORTHO05D006184 4.4e-08 62.0 106 37.7
RcHm_v2.0_Chr1g0329671 Rosa chinensis HOM05D000085 ORTHO05D006184 4.4e-08 62.0 94 40.4
DCAR_020608 Daucus carota HOM05D000085 ORTHO05D006184 7.6e-08 61.2 105 35.2
Lj3g0006871 Lotus japonicus HOM05D000085 ORTHO05D006184 9.9e-08 60.8 90 41.1
Medtr3g011730 Medicago truncatula HOM05D000085 ORTHO05D006184 1.3e-07 60.5 99 36.4
Nitab4.5_0004168g0020 Nicotiana tabacum HOM05D000085 ORTHO05D006184 1.3e-07 60.5 108 34.3
TPR.G30402 Trifolium pratense HOM05D000085 ORTHO05D006184 1.3e-07 60.5 100 35.0
Phvul.011G191900 Phaseolus vulgaris HOM05D000085 ORTHO05D006184 2.2e-07 59.7 104 33.7
SEGI_07503 Sequoiadendron giganteum HOM05D008363 ORTHO05D006184 1.1e-06 57.4 105 37.1
PGR044G1040 Punica granatum HOM05D000085 ORTHO05D006184 1.4e-06 57.0 100 36.0
AagrBONN_evm.TU.Sc2ySwM_228.2886 Anthoceros agrestis HOM05D000085 ORTHO05D001756 2.4e-06 56.2 91 37.4
Pp3c11_18470 Physcomitrium patens HOM05D000085 ORTHO05D001756 9.2e-06 54.3 95 32.6


User provided reference genes

Program Settings