Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p020611 Quercus lobata HOM05D000085 ORTHO05D006184 1.5e-50 202.6 106 100.0
QL01p020653 Quercus lobata HOM05D000085 ORTHO05D006184 1.9e-37 159.1 107 81.3
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 2.0e-34 149.1 109 75.2
TAR633G0957 Trochodendron aralioides HOM05D000085 ORTHO05D006184 1.7e-30 136.0 113 66.4
Potri.001G224800 Populus trichocarpa HOM05D000085 ORTHO05D006184 3.1e-27 125.2 96 69.8
Aqoxy2G00032 Aquilegia oxysepala HOM05D000085 ORTHO05D006184 4.0e-27 124.8 98 65.3
Manes.01G176300 Manihot esculenta HOM05D000085 ORTHO05D006184 5.8e-26 120.9 109 58.7
PSO675G2913 Papaver somniferum HOM05D000085 ORTHO05D006184 1.7e-25 119.4 92 66.3
TWI79G0144 Tripterygium wilfordii HOM05D000085 ORTHO05D006184 4.9e-25 117.9 98 59.2
Lj2A829G58 Lonicera japonica HOM05D000085 ORTHO05D006184 1.1e-24 116.7 98 62.2
Actinidia24490 Actinidia chinensis HOM05D000085 ORTHO05D006184 2.4e-24 115.5 107 60.7
PSO541G3755 Papaver somniferum HOM05D000085 ORTHO05D006184 3.0e-22 108.6 101 58.4
Lj6g0021794 Lotus japonicus HOM05D000085 ORTHO05D015977 3.9e-22 108.2 91 57.1
Potri.003G189850 Populus trichocarpa HOM05D000085 ORTHO05D006184 1.1e-21 106.7 95 57.9
Thecc.10G132100 Theobroma cacao HOM05D000085 ORTHO05D006184 2.5e-21 105.5 97 57.7
Thecc.09G256900 Theobroma cacao HOM05D000085 ORTHO05D006184 2.1e-20 102.4 109 51.4
VMungo0647G1792 Vigna mungo HOM05D000085 ORTHO05D006184 2.1e-20 102.4 96 52.1
FAN03G0175 Fragaria x ananassa HOM05D000085 ORTHO05D006184 2.8e-20 102.1 103 51.5
LjContig00564g0025361 Lotus japonicus HOM05D000085 ORTHO05D006184 3.6e-20 101.7 105 54.3
FAN01G1090 Fragaria x ananassa HOM05D000085 ORTHO05D006184 8.1e-20 100.5 103 51.5
Duzib168G1166 Durio zibethinus HOM05D000085 ORTHO05D006184 1.4e-19 99.8 109 51.4
FAN06G0172 Fragaria x ananassa HOM05D000085 ORTHO05D006184 1.4e-19 99.8 103 50.5
FAN06G0213 Fragaria x ananassa HOM05D000085 ORTHO05D006184 1.4e-19 99.8 103 50.5
MBI19_g24735_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D006184 1.4e-19 99.8 107 54.2
Phvul.008G204900 Phaseolus vulgaris HOM05D000085 ORTHO05D006184 1.4e-19 99.8 96 52.1
Manes.04G153800 Manihot esculenta HOM05D000085 ORTHO05D006184 8.9e-19 97.1 97 52.6
Atru.chr3.2934 Acer truncatum HOM05D000003 ORTHO05D000006 1.2e-18 96.7 112 50.0
Gorai.011G223900 Gossypium raimondii HOM05D000085 ORTHO05D006184 1.5e-18 96.3 102 49.0
Cpa.g.sc33.152 Carica papaya HOM05D000085 ORTHO05D006184 2.0e-18 95.9 108 49.1
Medtr4g128180 Medicago truncatula HOM05D000085 ORTHO05D006184 2.6e-18 95.5 94 55.3
Actinidia01698 Actinidia chinensis HOM05D000085 ORTHO05D006184 4.4e-18 94.7 99 52.5
Gohir.D10G199700 Gossypium hirsutum HOM05D000085 ORTHO05D006184 4.4e-18 94.7 102 48.0
TPR.G16401 Trifolium pratense HOM05D000085 ORTHO05D006184 4.4e-18 94.7 96 54.2
COL.COLO4_32861 Corchorus olitorius HOM05D000085 ORTHO05D006184 7.5e-18 94.0 109 50.5
PGR119G1958 Punica granatum HOM05D000085 ORTHO05D006184 7.5e-18 94.0 99 51.5
Duzib128G0691 Durio zibethinus HOM05D000085 ORTHO05D006184 9.8e-18 93.6 107 49.5
Ca_13661_v3 Cicer arietinum L. HOM05D000085 ORTHO05D015977 1.7e-17 92.8 96 46.9
Ca_13663_v3 Cicer arietinum L. HOM05D000085 ORTHO05D015977 1.7e-17 92.8 96 46.9
arahy.Tifrunner.gnm1.ann1.F9JT0R Arachis hypogaea HOM05D000085 ORTHO05D006184 2.2e-17 92.4 98 51.0
Medtr0205s0040 Medicago truncatula HOM05D000085 ORTHO05D015977 2.2e-17 92.4 95 50.5
Psat0s2703g0120 Pisum sativum HOM05D000085 ORTHO05D006184 2.2e-17 92.4 94 54.3
arahy.Tifrunner.gnm1.ann1.RDL00W Arachis hypogaea HOM05D000085 ORTHO05D006184 1.4e-16 89.7 98 50.0
Gohir.A07G036650 Gossypium hirsutum HOM05D000085 ORTHO05D006184 4.1e-16 88.2 110 48.2
Gohir.A10G191900 Gossypium hirsutum HOM05D000085 ORTHO05D006184 5.4e-16 87.8 108 46.3
Lsat_1_v5_gn_2_96380 Lactuca sativa HOM05D000085 ORTHO05D006184 5.4e-16 87.8 94 46.8
Gorai.001G043200 Gossypium raimondii HOM05D000085 ORTHO05D006184 7.1e-16 87.4 110 48.2
Duzib114G0039 Durio zibethinus HOM05D000085 ORTHO05D006184 1.6e-15 86.3 106 48.1
FAN10G2237 Fragaria x ananassa HOM05D000085 ORTHO05D006184 2.7e-15 85.5 130 40.0
Lj9A652T57 Lonicera japonica HOM05D000085 ORTHO05D006184 2.7e-15 85.5 101 49.5
Cpa.g.sc34.209 Carica papaya HOM05D000085 ORTHO05D006184 4.6e-15 84.7 101 52.5
DCAR_029721 Daucus carota HOM05D000085 ORTHO05D006184 6.0e-15 84.3 101 45.5
arahy.Tifrunner.gnm1.ann1.XR6IRG Arachis hypogaea HOM05D000085 ORTHO05D015977 7.8e-15 84.0 97 47.4
Haze_02957 Corylus avellana HOM05D000085 ORTHO05D006184 7.8e-15 84.0 97 48.5
MBI19_g24736_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D006184 1.7e-14 82.8 106 47.2
Potri.001G035900 Populus trichocarpa HOM05D000085 ORTHO05D006184 3.0e-14 82.0 105 43.8
Glyma.04G126000 Glycine max HOM05D000085 ORTHO05D006184 3.9e-14 81.6 95 48.4
PGR031G0712 Punica granatum HOM05D000085 ORTHO05D006184 3.9e-14 81.6 102 45.1
VMungo1080G0919 Vigna mungo HOM05D000085 ORTHO05D006184 3.9e-14 81.6 89 52.8
Glyma.06G312600 Glycine max HOM05D000085 ORTHO05D006184 6.6e-14 80.9 88 47.7
TWI38G0146 Tripterygium wilfordii HOM05D000085 ORTHO05D006184 8.6e-14 80.5 96 53.1
arahy.Tifrunner.gnm1.ann1.T5TB3S Arachis hypogaea HOM05D000085 ORTHO05D015977 1.1e-13 80.1 97 45.4
PGR044G1330 Punica granatum HOM05D000085 ORTHO05D006184 9.5e-13 77.0 88 42.0
TWI63G1428 Tripterygium wilfordii HOM05D000085 ORTHO05D006184 6.2e-12 74.3 176 33.0
TPR.G30402 Trifolium pratense HOM05D000085 ORTHO05D006184 1.4e-11 73.2 103 36.9
Lj3g0006871 Lotus japonicus HOM05D000085 ORTHO05D006184 1.8e-11 72.8 97 42.3
Phvul.005G013200 Phaseolus vulgaris HOM05D000085 ORTHO05D006184 1.8e-11 72.8 95 45.3
Medtr3g011730 Medicago truncatula HOM05D000085 ORTHO05D006184 2.3e-11 72.4 97 40.2
PGR044G1040 Punica granatum HOM05D000085 ORTHO05D006184 2.3e-11 72.4 89 44.9
DCAR_018970 Daucus carota HOM05D000085 ORTHO05D006184 3.1e-11 72.0 107 43.9
Hma1.2p1_1711F.1_g298710 Hydrangea macrophylla HOM05D000085 ORTHO05D006184 5.2e-11 71.2 48 77.1
Sed0014409 Sechium edule HOM05D000085 ORTHO05D006184 5.2e-11 71.2 96 41.7
Sed0020592 Sechium edule HOM05D000085 ORTHO05D006184 6.8e-11 70.9 91 40.7
CiPaw.13G018100 Carya illinoinensis HOM05D000085 ORTHO05D006184 1.2e-10 70.1 97 43.3
RcHm_v2.0_Chr1g0329671 Rosa chinensis HOM05D000085 ORTHO05D006184 1.5e-10 69.7 90 47.8
Dinv03760 Davidia involucrata HOM05D000085 ORTHO05D006184 2.6e-10 68.9 108 42.6
MELO3C011783.2 Cucumis melo HOM05D000085 ORTHO05D006184 9.9e-10 67.0 106 38.7
TPR.G16382 Trifolium pratense HOM05D000085 ORTHO05D006184 9.9e-10 67.0 99 40.4
CsaV3_5G029350 Cucumis sativus L. HOM05D000085 ORTHO05D006184 1.3e-09 66.6 106 38.7
Ca_24049_v3 Cicer arietinum L. HOM05D000085 ORTHO05D006184 3.8e-09 65.1 102 36.3
SEGI_07503 Sequoiadendron giganteum HOM05D008363 ORTHO05D006184 4.9e-09 64.7 96 39.6
Cpa.g.sc26.71 Carica papaya HOM05D000085 ORTHO05D009791 8.4e-09 63.9 81 43.2
AagrBONN_evm.TU.Sc2ySwM_228.2886 Anthoceros agrestis HOM05D000085 ORTHO05D001756 1.4e-08 63.2 100 40.0
arahy.Tifrunner.gnm1.ann1.VTKH3T Arachis hypogaea HOM05D000085 ORTHO05D006184 4.1e-08 61.6 97 38.1
VMungo1127G0217 Vigna mungo HOM05D000085 ORTHO05D006184 7.1e-08 60.8 99 36.4
Glyma.13G187600 Glycine max HOM05D000085 ORTHO05D006184 9.2e-08 60.5 99 35.4
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 3.5e-07 58.5 102 31.4
Lj1A1080T28 Lonicera japonica HOM05D000085 ORTHO05D006184 3.5e-07 58.5 111 34.2
Phvul.011G191900 Phaseolus vulgaris HOM05D000085 ORTHO05D006184 1.0e-06 57.0 99 33.3
Pp3c8_1070 Physcomitrium patens HOM05D000085 ORTHO05D001756 1.3e-06 56.6 95 35.8
DCAR_020608 Daucus carota HOM05D000085 ORTHO05D006184 2.3e-06 55.8 107 34.6
MBI03_g20848_MAGBIO Magnolia biondii HOM05D000085 ORTHO05D009791 3.9e-06 55.1 84 38.1
Glyma.13G187700 Glycine max HOM05D000085 ORTHO05D006184 5.1e-06 54.7 98 34.7
Nitab4.5_0007610g0030 Nicotiana tabacum HOM05D000085 ORTHO05D006184 8.6e-06 53.9 102 30.4


User provided reference genes

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