Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 1.8e-81 305.8 152 100.0
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 4.2e-62 241.5 150 76.7
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 5.5e-62 241.1 145 83.4
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 3.6e-61 238.4 148 77.7
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 7.9e-61 237.3 147 79.6
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 5.1e-60 234.6 148 78.4
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 1.1e-59 233.4 152 73.7
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.5e-59 233.0 148 75.0
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.9e-59 232.6 148 75.0
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 2.5e-59 232.3 146 80.1
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 3.3e-59 231.9 150 77.3
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 5.7e-59 231.1 150 75.3
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 2.2e-58 229.2 148 75.0
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 2.8e-58 228.8 148 79.1
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 3.7e-58 228.4 148 76.4
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 1.4e-57 226.5 146 76.0
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.8e-57 226.1 147 76.2
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 5.3e-57 224.6 150 74.0
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 5.3e-57 224.6 148 73.6
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 6.9e-57 224.2 147 74.8
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 6.9e-57 224.2 147 74.8
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 4.5e-56 221.5 148 74.3
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 5.9e-56 221.1 150 72.7
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 5.9e-56 221.1 150 72.7
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 1.3e-55 219.9 146 76.0
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 2.9e-55 218.8 145 77.2
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 2.9e-55 218.8 148 73.6
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 5.0e-55 218.0 148 72.3
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 5.0e-55 218.0 148 72.3
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 8.5e-55 217.2 150 72.0
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 8.5e-55 217.2 148 70.9
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 1.1e-54 216.9 149 72.5
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 5.5e-54 214.5 147 70.1
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 9.4e-54 213.8 146 71.9
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 9.4e-54 213.8 147 71.4
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 1.6e-53 213.0 147 71.4
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 2.1e-53 212.6 149 69.1
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 3.6e-53 211.8 149 69.8
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 6.1e-53 211.1 147 72.1
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 1.8e-52 209.5 148 73.0
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 2.3e-52 209.1 147 68.0
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 3.0e-52 208.8 147 71.4
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 3.9e-52 208.4 147 69.4
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 3.9e-52 208.4 147 70.7
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 5.1e-52 208.0 152 68.4
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 6.7e-52 207.6 147 70.1
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 8.8e-52 207.2 147 69.4
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 8.8e-52 207.2 148 70.3
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 8.8e-52 207.2 147 68.7
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 2.0e-51 206.1 147 66.7
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 2.0e-51 206.1 147 71.4
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 2.6e-51 205.7 148 69.6
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 3.3e-51 205.3 148 68.9
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 4.4e-51 204.9 148 70.3
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 5.7e-51 204.5 145 69.7
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 5.7e-51 204.5 145 71.7
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 7.4e-51 204.1 147 68.0
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 7.4e-51 204.1 147 68.0
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 7.4e-51 204.1 147 68.0
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 7.4e-51 204.1 147 68.0
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 7.4e-51 204.1 147 68.0
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 9.7e-51 203.8 147 68.0
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 9.7e-51 203.8 147 67.3
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 2.8e-50 202.2 141 70.9
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 6.3e-50 201.1 147 66.7
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 2.4e-49 199.1 150 66.0
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 3.1e-49 198.7 145 69.7
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 6.9e-49 197.6 136 74.3
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 9.1e-49 197.2 146 68.5
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.2e-48 196.8 161 64.0
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 5.9e-48 194.5 145 66.9
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 1.0e-47 193.7 145 69.0
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 2.2e-47 192.6 145 66.9
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 2.9e-47 192.2 148 67.6
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 2.9e-47 192.2 150 64.7
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 3.2e-46 188.7 145 64.1
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 9.4e-46 187.2 149 65.1
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 1.4e-44 183.3 147 64.6
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 4.4e-43 178.3 144 61.8
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 9.7e-43 177.2 150 58.7
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 3.7e-42 175.3 152 61.8
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 6.3e-42 174.5 182 54.4
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 8.2e-42 174.1 146 59.6
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 9.1e-41 170.6 148 58.1
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 1.2e-40 170.2 150 58.7
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 3.8e-39 165.2 146 61.0
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 3.8e-39 165.2 146 58.2
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 6.5e-39 164.5 167 54.5
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 2.5e-38 162.5 129 62.8
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 1.2e-37 160.2 149 59.7
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 1.8e-36 156.4 190 46.8
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 6.7e-36 154.5 148 50.0
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 5.3e-33 144.8 114 61.4
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 7.0e-33 144.4 93 76.3
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 9.1e-33 144.1 151 51.7
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 5.9e-32 141.4 97 71.1
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 7.2e-30 134.4 95 71.6
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 2.1e-29 132.9 94 69.1
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 2.7e-29 132.5 148 52.0
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 2.7e-29 132.5 148 52.0
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 3.4e-27 125.6 82 75.6
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 2.7e-24 115.9 124 54.8
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 1.0e-23 114.0 157 39.5
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 5.5e-22 108.2 103 52.4
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 1.2e-21 107.1 91 65.9
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 3.6e-21 105.5 112 52.7
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 1.0e-20 104.0 155 40.6
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 1.4e-20 103.6 147 42.9
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 3.0e-20 102.4 52 90.4
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 4.0e-20 102.1 97 53.6
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.2e-19 100.5 63 77.8
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.5e-19 100.1 93 59.1
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 2.0e-19 99.8 55 80.0
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 1.4e-17 93.6 98 54.1
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 2.4e-17 92.8 66 74.2
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 5.0e-15 85.1 54 74.1
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 8.6e-15 84.3 62 66.1
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 1.9e-14 83.2 150 37.3
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 4.7e-13 78.6 53 66.0
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 4.4e-11 72.0 120 40.8
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 2.4e-09 66.2 75 52.0


User provided reference genes

Program Settings