Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 2.0e-75 286.2 206 100.0
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 4.2e-33 145.6 109 79.8
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 2.1e-32 143.3 113 74.3
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 8.0e-32 141.4 110 80.0
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 1.4e-31 140.6 109 77.1
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.3e-31 139.8 113 77.0
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 5.2e-31 138.7 113 76.1
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 6.8e-31 138.3 105 79.0
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 1.2e-30 137.5 115 72.2
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 3.4e-30 136.0 99 79.8
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 3.4e-30 136.0 99 79.8
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 4.4e-30 135.6 108 75.0
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 7.5e-30 134.8 105 71.4
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 7.5e-30 134.8 105 71.4
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 7.5e-30 134.8 94 76.6
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 7.5e-30 134.8 99 79.8
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 7.5e-30 134.8 115 70.4
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 9.8e-30 134.4 105 76.2
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 9.8e-30 134.4 113 72.6
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 9.8e-30 134.4 105 75.2
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 1.3e-29 134.0 99 80.8
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 1.3e-29 134.0 99 80.8
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 2.2e-29 133.3 90 73.3
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 2.2e-29 133.3 99 80.8
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 2.8e-29 132.9 105 75.2
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 2.8e-29 132.9 95 73.7
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 2.8e-29 132.9 113 70.8
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 3.7e-29 132.5 106 71.7
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 3.7e-29 132.5 105 74.3
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 3.7e-29 132.5 105 75.2
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 3.7e-29 132.5 105 75.2
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 4.9e-29 132.1 93 69.9
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 8.3e-29 131.3 98 79.6
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 8.3e-29 131.3 99 79.8
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 8.3e-29 131.3 95 72.6
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 8.3e-29 131.3 99 78.8
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 1.1e-28 131.0 95 72.6
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 1.4e-28 130.6 113 68.1
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 1.8e-28 130.2 99 77.8
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 1.8e-28 130.2 110 73.6
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 3.1e-28 129.4 172 52.3
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 3.1e-28 129.4 99 74.7
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 4.1e-28 129.0 99 76.8
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 4.1e-28 129.0 172 52.9
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 5.4e-28 128.6 112 67.9
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 5.4e-28 128.6 106 71.7
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 5.4e-28 128.6 99 77.8
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 9.2e-28 127.9 106 68.9
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 9.2e-28 127.9 99 78.8
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 1.2e-27 127.5 81 76.5
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 1.6e-27 127.1 88 78.4
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 2.0e-27 126.7 106 68.9
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 2.7e-27 126.3 99 75.8
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 2.7e-27 126.3 99 74.7
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 2.7e-27 126.3 109 70.6
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 3.5e-27 125.9 102 68.6
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 7.8e-27 124.8 99 69.7
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 1.7e-26 123.6 99 72.7
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 2.3e-26 123.2 115 67.8
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 1.1e-25 120.9 81 77.8
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 1.1e-25 120.9 87 66.7
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 1.9e-25 120.2 82 70.7
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 2.5e-25 119.8 85 78.8
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 3.3e-25 119.4 117 63.2
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 3.3e-25 119.4 93 62.4
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 4.3e-25 119.0 99 71.7
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 7.3e-25 118.2 115 67.0
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 9.5e-25 117.9 99 73.7
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 2.8e-24 116.3 82 81.7
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 1.0e-23 114.4 82 79.3
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 1.8e-23 113.6 82 75.6
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 2.3e-23 113.2 82 76.8
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 3.0e-23 112.8 82 78.0
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 3.0e-23 112.8 82 75.6
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 4.0e-23 112.5 82 76.8
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 4.0e-23 112.5 110 63.6
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 4.0e-23 112.5 110 63.6
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 4.0e-23 112.5 110 63.6
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 4.0e-23 112.5 110 63.6
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 4.0e-23 112.5 110 63.6
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 2.0e-22 110.2 79 73.4
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 3.4e-22 109.4 94 57.4
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 4.9e-21 105.5 82 76.8
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 1.1e-20 104.4 107 63.6
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 3.2e-20 102.8 81 63.0
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 5.4e-20 102.1 171 39.8
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 3.0e-18 96.3 79 73.4
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 3.9e-18 95.9 79 73.4
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 1.2e-16 90.9 107 62.6
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 6.8e-15 85.1 40 85.0
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 5.8e-14 82.0 64 68.8
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 3.7e-13 79.3 67 70.1
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 2.4e-12 76.6 81 55.6
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 1.2e-11 74.3 54 70.4
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 4.6e-11 72.4 61 65.6
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 1.1e-09 67.8 73 52.1
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 4.0e-07 59.3 35 82.9
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 1.5e-06 57.4 29 75.9


User provided reference genes

Program Settings