Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p018797 Quercus lobata HOM05D011240 ORTHO05D014254 1.3e-205 719.5 375 100.0
QL02p014124 Quercus lobata HOM05D011240 ORTHO05D014254 1.4e-146 523.5 380 72.6
QL01p052883 Quercus lobata HOM05D011240 ORTHO05D005201 9.5e-124 447.6 316 73.1
QL09p017343 Quercus lobata HOM05D011240 ORTHO05D014254 3.1e-122 442.6 317 72.2
QL10p033821 Quercus lobata HOM05D011240 ORTHO05D014254 1.5e-121 440.3 318 70.8
QL05p031451 Quercus lobata HOM05D011240 ORTHO05D014254 8.3e-120 434.5 325 70.2
QL06p005531 Quercus lobata HOM05D011240 ORTHO05D014254 4.4e-113 412.1 291 75.9
QL06p001256 Quercus lobata HOM05D011240 ORTHO05D002032 1.7e-101 373.6 309 65.4
QL01p015673 Quercus lobata HOM05D011240 ORTHO05D014254 5.3e-90 335.5 253 70.0
QL06p003940 Quercus lobata HOM05D002900 ORTHO05D014254 2.3e-85 320.1 342 56.4
QL01p048139 Quercus lobata HOM05D011240 ORTHO05D014254 3.4e-81 306.2 342 53.2
QL05p035913 Quercus lobata HOM05D011240 ORTHO05D014254 2.3e-77 293.5 281 59.4
QL01p052098 Quercus lobata HOM05D000403 ORTHO05D000350 6.9e-74 282.0 226 67.3
QL02p016300 Quercus lobata HOM05D005978 ORTHO05D007472 1.9e-71 273.9 219 68.5
QL01p034814 Quercus lobata HOM05D011240 ORTHO05D014254 7.0e-50 202.2 217 52.5
QL10p048098 Quercus lobata HOM05D011240 ORTHO05D014254 3.3e-44 183.3 143 69.9
QL06p027729 Quercus lobata HOM05D004739 ORTHO05D005784 3.5e-25 120.2 163 48.5
QL12p001784 Quercus lobata HOM05D001402 ORTHO05D001302 5.7e-20 102.8 97 58.8
QL04p080867 Quercus lobata HOM05D011240 ORTHO05D014254 1.7e-19 101.3 132 50.0
QL03p012098 Quercus lobata HOM05D000555 ORTHO05D000646 2.4e-18 97.4 104 56.7
QL06p032463 Quercus lobata HOM05D000033 ORTHO05D001614 7.0e-18 95.9 86 60.5
QL08p017220 Quercus lobata HOM05D004364 ORTHO05D006299 1.0e-16 92.0 98 57.1
QL04p096233 Quercus lobata HOM05D000032 ORTHO05D003522 3.9e-16 90.1 96 56.2
QL09p054819 Quercus lobata HOM05D011240 ORTHO05D014254 3.9e-16 90.1 79 59.5
QL04p064377 Quercus lobata HOM05D000013 ORTHO05D000646 2.1e-14 84.3 92 57.6
QL10p058180 Quercus lobata HOM05D000555 ORTHO05D000646 8.0e-14 82.4 87 55.2
QL04p037144 Quercus lobata HOM05D000555 ORTHO05D000646 1.0e-13 82.0 114 46.5
QL06p006644 Quercus lobata HOM05D000205 ORTHO05D000438 4.0e-13 80.1 92 53.3
QL11p056075 Quercus lobata HOM05D011240 ORTHO05D014254 4.0e-13 80.1 138 39.9
QL01p015808 Quercus lobata HOM05D000004 ORTHO05D000002 6.8e-13 79.3 93 41.9
QL03p069728 Quercus lobata HOM05D000004 ORTHO05D000002 6.8e-13 79.3 93 41.9
QL04p013037 Quercus lobata HOM05D000004 ORTHO05D000002 6.8e-13 79.3 93 41.9
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 6.8e-13 79.3 93 41.9
QL11p032775 Quercus lobata HOM05D000004 ORTHO05D000002 6.8e-13 79.3 93 41.9
QL05p022806 Quercus lobata HOM05D000004 ORTHO05D000002 8.9e-13 79.0 93 41.9
Hma1.2p1_0001F.1_g001750 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 7.5e-12 75.9 93 38.7
Hma1.2p1_1176F.1_g264230 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.8e-12 75.5 94 42.6
QL04p063674 Quercus lobata HOM05D000004 ORTHO05D000002 3.7e-11 73.6 93 39.8
QL10p033188 Quercus lobata HOM05D001644 ORTHO05D001641 8.3e-11 72.4 212 30.7
QL12p020786 Quercus lobata HOM05D004770 ORTHO05D005572 4.1e-10 70.1 84 47.6
QL04p035257 Quercus lobata HOM05D000555 ORTHO05D000646 1.2e-09 68.6 68 55.9
MBI15_g29726_MAGBIO Magnolia biondii HOM05D015713 ORTHO05D014643 1.6e-09 68.2 96 34.4
QL07p037988 Quercus lobata HOM05D043625 ORTHO05D000646 2.7e-09 67.4 147 36.1
QL93p1999_0051 Quercus lobata HOM05D043625 ORTHO05D000646 2.7e-09 67.4 147 36.1
Hma1.2p1_1811F.1_g303630 Hydrangea macrophylla HOM05D011119 ORTHO05D011737 3.5e-09 67.0 87 35.6
QL05p006270 Quercus lobata HOM05D000004 ORTHO05D000002 3.5e-09 67.0 93 34.4
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 3.5e-09 67.0 82 37.8
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 3.5e-09 67.0 82 37.8
QL12p018079 Quercus lobata HOM05D000555 ORTHO05D000646 3.5e-09 67.0 161 34.2
SHI47288 Sapria himalayana HOM05D001397 ORTHO05D000002 4.6e-09 66.6 88 35.2
Hma1.2p1_1483F.1_g286280 Hydrangea macrophylla HOM05D000004 ORTHO05D011737 7.8e-09 65.9 93 34.4
CSS0030845 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-08 65.5 93 35.5
SHI48626 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-08 65.5 88 34.1
SHI20505 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-08 65.1 88 34.1
TWI77G0626 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.3e-08 65.1 96 32.3
MBI06_g28844_MAGBIO Magnolia biondii HOM05D012572 ORTHO05D011737 1.7e-08 64.7 95 33.7
QL02p103579 Quercus lobata HOM05D000004 ORTHO05D000002 1.7e-08 64.7 185 24.9
SHI50854 Sapria himalayana HOM05D000004 ORTHO05D000002 2.3e-08 64.3 88 33.0
QL05p044227 Quercus lobata HOM05D000004 ORTHO05D000002 3.0e-08 63.9 93 33.3
QL05p084077 Quercus lobata HOM05D000004 ORTHO05D000002 3.0e-08 63.9 93 33.3
QL93p0053_0688 Quercus lobata HOM05D000004 ORTHO05D000002 3.0e-08 63.9 93 33.3
SHI00352 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-08 63.9 88 33.0
SHI03109 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-08 63.9 88 33.0
SHI50378 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-08 63.9 88 33.0
SHI50831 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-08 63.9 88 33.0
SHI50872 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-08 63.9 88 33.0
SHI51873 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-08 63.9 88 33.0
SHI54723 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-08 63.9 88 33.0
SHI54655 Sapria himalayana HOM05D000004 ORTHO05D000002 5.0e-08 63.2 88 33.0
SHI55032 Sapria himalayana HOM05D000004 ORTHO05D000002 5.0e-08 63.2 88 33.0
SHI54675 Sapria himalayana HOM05D000004 ORTHO05D000002 6.6e-08 62.8 93 35.5
Hma1.2p1_1832F.1_g304590 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 8.6e-08 62.4 87 36.8
CSS0041784 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-07 61.6 89 33.7
Rhsim03G0243100 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.5e-07 61.6 93 33.3
QL04p062379 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-07 61.2 72 40.3
QL09p002786 Quercus lobata HOM05D000004 ORTHO05D000002 1.9e-07 61.2 72 40.3
TWI09G1040 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.9e-07 61.2 77 36.4
SHI55000 Sapria himalayana HOM05D000004 ORTHO05D000002 2.5e-07 60.8 93 35.5
Rhsim04G0004700 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.3e-07 60.5 101 31.7
FvH4_3g23752 Fragaria vesca HOM05D000004 ORTHO05D014643 5.6e-07 59.7 95 29.5
FvH4_5g27471 Fragaria vesca HOM05D000004 ORTHO05D000563 5.6e-07 59.7 95 29.5
FvH4_5g28291 Fragaria vesca HOM05D000004 ORTHO05D000563 5.6e-07 59.7 95 29.5
FvH4_c2g00053 Fragaria vesca HOM05D000004 ORTHO05D000563 5.6e-07 59.7 95 29.5
Hund23938 Selenicereus undatus HOM05D000004 ORTHO05D000563 7.3e-07 59.3 119 29.4
FvH4_2g12101 Fragaria vesca HOM05D001125 ORTHO05D003189 9.5e-07 58.9 97 29.9
SEGI_38234 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 1.2e-06 58.5 77 36.4
TWI14G0868 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.6e-06 58.2 159 25.2
TWI34G1438 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.1e-06 57.8 88 30.7
Prupe.7G034800 Prunus persica HOM05D000004 ORTHO05D000563 2.8e-06 57.4 81 34.6
Thecc.08G159800 Theobroma cacao HOM05D000004 ORTHO05D000563 2.8e-06 57.4 88 30.7
ECA238G0032 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-06 57.0 93 31.2
PSO063G0930 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-06 57.0 93 30.1
TWI63G0248 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.6e-06 57.0 87 31.0
Hund10392 Selenicereus undatus HOM05D013854 ORTHO05D000563 4.7e-06 56.6 82 35.4
Hund19909 Selenicereus undatus HOM05D008634 ORTHO05D000695 6.2e-06 56.2 82 34.1
MBI01_g38636_MAGBIO Magnolia biondii HOM05D012572 ORTHO05D011737 8.1e-06 55.8 82 34.1
Medtr7g056297 Medicago truncatula HOM05D000004 ORTHO05D000002 8.1e-06 55.8 77 36.4
Hund14794 Selenicereus undatus HOM05D001165 ORTHO05D010360 8.1e-06 55.8 80 33.8


User provided reference genes

Program Settings