Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p018092 Quercus lobata HOM05D006549 ORTHO05D008080 2.4e-255 885.2 497 100.0
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 2.2e-128 463.4 329 89.7
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 4.8e-115 419.1 336 71.4
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 5.1e-109 399.1 402 61.2
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 3.7e-99 366.3 335 67.8
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 1.8e-98 364.0 336 63.7
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 5.3e-98 362.5 339 64.9
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 5.3e-98 362.5 341 62.5
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 1.6e-97 360.9 338 64.8
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 1.6e-97 360.9 335 60.3
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 3.5e-97 359.8 338 64.5
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 1.3e-96 357.8 339 64.3
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 5.0e-96 355.9 338 61.8
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 1.5e-95 354.4 338 63.3
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 9.4e-95 351.7 338 63.3
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 9.4e-95 351.7 338 62.7
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 2.3e-93 347.1 393 55.7
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 1.5e-92 344.4 345 60.6
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 4.4e-92 342.8 342 58.8
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 9.7e-92 341.7 338 58.9
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 9.7e-92 341.7 397 56.9
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.3e-91 341.3 338 58.9
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 1.4e-90 337.8 343 59.5
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 1.8e-90 337.4 350 59.4
Lju41A40T23 Lonicera japonica HOM05D006549 ORTHO05D008080 7.7e-89 332.0 339 61.4
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 1.3e-88 331.3 402 54.0
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 2.9e-88 330.1 337 59.1
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 6.5e-88 328.9 347 58.8
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 1.9e-87 327.4 335 61.8
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 1.9e-87 327.4 335 60.0
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 3.2e-87 326.6 209 77.0
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 5.5e-87 325.9 338 60.9
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 5.5e-87 325.9 337 58.5
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 9.4e-87 325.1 335 63.0
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 1.2e-86 324.7 349 57.9
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 3.6e-86 323.2 334 54.8
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 3.6e-86 323.2 334 54.8
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 4.7e-86 322.8 338 57.7
Ah.06g193800 Amaranthus hybridus HOM05D006549 ORTHO05D008080 4.7e-86 322.8 337 52.8
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 2.3e-85 320.5 343 55.7
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 6.8e-85 318.9 334 57.5
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 6.8e-85 318.9 336 58.3
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 8.8e-85 318.5 334 61.4
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 2.0e-84 317.4 332 62.3
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 4.4e-84 316.2 330 53.0
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 5.7e-84 315.8 337 55.5
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 9.8e-84 315.1 336 56.8
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 9.8e-84 315.1 334 54.8
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 4.8e-83 312.8 333 57.4
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 6.3e-83 312.4 335 59.7
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 6.3e-83 312.4 341 55.1
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 8.3e-83 312.0 318 57.5
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 1.1e-82 311.6 341 53.1
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 1.4e-82 311.2 341 55.1
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 1.6e-81 307.8 332 58.4
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 1.6e-81 307.8 340 52.4
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 1.6e-81 307.8 338 60.7
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 2.0e-81 307.4 336 53.3
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 2.0e-81 307.4 335 57.6
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 2.7e-81 307.0 338 55.6
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 2.7e-81 307.0 336 54.8
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 4.5e-81 306.2 342 58.5
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 7.7e-81 305.4 333 56.8
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 1.0e-80 305.1 351 55.8
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 1.7e-80 304.3 330 53.3
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 2.9e-80 303.5 334 55.1
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 2.9e-80 303.5 338 58.0
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 5.0e-80 302.8 337 55.5
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 5.0e-80 302.8 351 55.0
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 1.5e-79 301.2 338 56.8
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 1.5e-79 301.2 345 54.2
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 1.5e-79 301.2 204 72.5
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 3.2e-79 300.1 336 54.8
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 5.5e-79 299.3 337 55.5
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 9.5e-79 298.5 332 55.4
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 1.6e-78 297.7 334 58.1
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 3.6e-78 296.6 361 53.7
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 4.7e-78 296.2 334 55.1
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 4.7e-78 296.2 334 56.9
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 2.3e-77 293.9 334 52.7
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 4.0e-77 293.1 338 56.5
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 8.8e-77 292.0 196 73.5
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 1.2e-76 291.6 333 57.4
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 2.0e-76 290.8 349 50.4
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 2.0e-76 290.8 343 52.5
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 2.6e-76 290.4 348 58.0
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 8.3e-75 285.4 350 54.6
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 1.1e-74 285.0 329 57.8
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 1.4e-74 284.6 334 53.6
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 1.4e-74 284.6 206 68.9
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 5.4e-74 282.7 333 49.5
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 9.2e-74 282.0 335 51.9
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 2.9e-72 276.9 273 58.2
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 6.6e-72 275.8 207 66.2
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 9.5e-71 271.9 345 56.2
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 9.5e-71 271.9 332 47.6
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 1.0e-69 268.5 335 50.4
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 2.3e-69 267.3 341 51.0
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 3.4e-68 263.5 177 72.9
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 2.9e-67 260.4 204 63.7
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 8.3e-67 258.8 176 72.2
FAN16G0297 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.4e-66 258.1 165 75.2
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 3.5e-65 253.4 372 48.1
TAR633G0410 Trochodendron aralioides HOM05D006549 ORTHO05D008080 1.5e-60 238.0 144 79.2
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 3.4e-60 236.9 213 57.3
Duzib168G0228 Durio zibethinus HOM05D006549 ORTHO05D008080 3.3e-55 220.3 314 50.0
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla HOM05D006549 ORTHO05D008080 1.6e-54 218.0 135 74.8
BcaB08g37001 Brassica carinata HOM05D006549 ORTHO05D008080 8.1e-54 215.7 202 60.4
SHI46597 Sapria himalayana HOM05D006549 ORTHO05D008080 6.6e-48 196.1 363 35.8
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 1.8e-45 188.0 192 50.0
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 3.8e-43 180.3 196 48.0
Cc01_g06170 Coffea canephora HOM05D006549 ORTHO05D008080 3.2e-42 177.2 112 76.8
Pp3c3_2270 Physcomitrium patens HOM05D006549 ORTHO05D008080 4.1e-42 176.8 204 44.6
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 2.7e-41 174.1 207 43.5
CBR_g300 Chara braunii HOM05D006549 ORTHO05D008080 1.4e-29 135.2 233 33.5
PRCOL_00001563 Prasinoderma coloniale HOM05D006549 ORTHO05D008080 9.3e-26 122.5 178 37.6
MCO09G159 Micromonas commoda HOM05D006549 ORTHO05D008080 3.1e-21 107.5 208 33.7
Cpa.g.sc84.3 Carica papaya HOM05D006549 ORTHO05D008080 6.9e-21 106.3 56 91.1
MELO3C029487.2 Cucumis melo HOM05D006549 ORTHO05D008080 6.9e-21 106.3 64 79.7
Cre14.g629550 Chlamydomonas reinhardtii HOM05D006549 ORTHO05D008080 2.2e-19 101.3 182 34.1
CSS0036252 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 1.5e-15 88.6 59 74.6


User provided reference genes

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