Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p016614 Quercus lobata HOM05D008349 ORTHO05D010116 1.6e-39 165.6 84 100.0
CiPaw.13G148400 Carya illinoinensis HOM05D008349 ORTHO05D010116 1.1e-24 116.3 83 73.5
Dinv22212 Davidia involucrata HOM05D008349 ORTHO05D010116 6.8e-22 107.1 83 66.3
Potri.009G068800 Populus trichocarpa HOM05D008349 ORTHO05D010116 2.7e-18 95.1 84 63.1
Sabra09G0051800 Salix brachista HOM05D008349 ORTHO05D010116 1.7e-17 92.4 81 63.0
Cfa009902 Carpinus fangiana HOM05D008349 ORTHO05D010116 6.6e-17 90.5 85 62.4
QL07p011743 Quercus lobata HOM05D008349 ORTHO05D010116 1.5e-16 89.4 83 59.0
Nn7g36871 Nelumbo nucifera HOM05D008349 ORTHO05D010116 1.9e-16 89.0 84 60.7
Potri.001G274200 Populus trichocarpa HOM05D008349 ORTHO05D010116 1.9e-16 89.0 84 58.3
CiPaw.09G049400 Carya illinoinensis HOM05D008349 ORTHO05D010116 8.1e-15 83.6 85 56.5
Hma1.2p1_0460F.1_g157620 Hydrangea macrophylla HOM05D008349 ORTHO05D010116 8.1e-15 83.6 88 56.8
Eucgr.B03753 Eucalyptus grandis HOM05D008349 ORTHO05D010116 2.4e-14 82.0 83 59.0
Manes.02G138100 Manihot esculenta HOM05D008349 ORTHO05D010116 1.5e-13 79.3 86 58.1
TAR622G0427 Trochodendron aralioides HOM05D008349 ORTHO05D010116 2.6e-13 78.6 74 59.5
TAR633G0966 Trochodendron aralioides HOM05D008349 ORTHO05D010116 2.6e-13 78.6 74 59.5
CiPaw.10G041900 Carya illinoinensis HOM05D008349 ORTHO05D010116 3.4e-13 78.2 84 53.6
Haze_23263 Corylus avellana HOM05D008349 ORTHO05D010116 5.8e-13 77.4 86 58.1
Thecc.05G124300 Theobroma cacao HOM05D008349 ORTHO05D010116 5.8e-13 77.4 86 55.8
Potri.016G034950 Populus trichocarpa HOM05D008349 ORTHO05D010116 1.3e-12 76.3 89 53.9
Potri.006G036700 Populus trichocarpa HOM05D008349 ORTHO05D010116 8.4e-12 73.6 91 51.6
Manes.08G060951 Manihot esculenta HOM05D008349 ORTHO05D010116 1.4e-11 72.8 86 54.7
arahy.Tifrunner.gnm1.ann1.K04G9P Arachis hypogaea HOM05D012946 ORTHO05D010116 1.9e-11 72.4 79 55.7
arahy.Tifrunner.gnm1.ann1.Y676PW Arachis hypogaea HOM05D012946 ORTHO05D010116 1.9e-11 72.4 79 55.7
Cfa019988 Carpinus fangiana HOM05D008349 ORTHO05D010116 1.9e-11 72.4 83 51.8
COL.COLO4_23432 Corchorus olitorius HOM05D008349 ORTHO05D010116 2.4e-11 72.0 104 50.0
Prupe.7G031000 Prunus persica HOM05D008349 ORTHO05D010116 2.4e-11 72.0 87 54.0
EL10Ac3g07259 Beta vulgaris HOM05D008349 ORTHO05D010116 5.4e-11 70.9 98 44.9
Dinv36146 Davidia involucrata HOM05D000139 ORTHO05D000103 1.2e-10 69.7 53 62.3
Phvul.006G016000 Phaseolus vulgaris HOM05D012946 ORTHO05D010116 1.6e-10 69.3 78 51.3
Manes.09G003300 Manihot esculenta HOM05D008349 ORTHO05D010116 2.1e-10 68.9 96 47.9
Lj6g0008281 Lotus japonicus HOM05D012946 ORTHO05D010116 1.7e-09 65.9 85 45.9
TAR636G0649 Trochodendron aralioides HOM05D008349 ORTHO05D010116 5.1e-09 64.3 74 54.1
Dinv21476 Davidia involucrata HOM05D001268 ORTHO05D010116 1.1e-08 63.2 78 53.8
Glyma.14G036500 Glycine max HOM05D012946 ORTHO05D010116 1.1e-08 63.2 75 54.7
CiPaw.14G110800 Carya illinoinensis HOM05D008349 ORTHO05D010116 2.5e-08 62.0 85 54.1
Glyma.02G278000 Glycine max HOM05D012946 ORTHO05D010116 3.3e-08 61.6 80 51.2
Medtr7g089320 Medicago truncatula HOM05D008349 ORTHO05D010116 4.3e-08 61.2 77 48.1
Glyma.20G042900 Glycine max HOM05D012946 ORTHO05D010116 9.6e-08 60.1 81 46.9
DCAR_020585 Daucus carota HOM05D008349 ORTHO05D010116 1.2e-07 59.7 94 47.9
Thecc.09G245500 Theobroma cacao HOM05D008349 ORTHO05D010116 1.2e-07 59.7 65 58.5
TAR623G1299 Trochodendron aralioides HOM05D008349 ORTHO05D010116 2.8e-07 58.5 55 60.0
Phvul.008G203000 Phaseolus vulgaris HOM05D012946 ORTHO05D010116 3.6e-07 58.2 73 46.6
TPR.G16083 Trifolium pratense HOM05D008349 ORTHO05D010116 4.7e-07 57.8 52 55.8
Medtr5g089080 Medicago truncatula HOM05D012946 ORTHO05D010116 1.1e-06 56.6 83 47.0
Lalb_Chr22g0357621 Lupinus albus HOM05D008349 ORTHO05D010116 1.4e-06 56.2 88 44.3
HPP92_012062 Vanilla planifolia HOM05D008349 ORTHO05D010116 5.2e-06 54.3 78 42.3
Glyma.03G125900 Glycine max HOM05D008349 ORTHO05D010116 9.0e-06 53.5 65 52.3
Lj1g0021932 Lotus japonicus HOM05D008349 ORTHO05D010116 9.0e-06 53.5 59 52.5


User provided reference genes

Program Settings