Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 1.9e-72 275.8 144 100.0
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 8.3e-52 207.2 154 74.0
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 3.3e-48 195.3 134 78.4
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 2.1e-47 192.6 126 80.2
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 2.1e-47 192.6 164 65.2
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 6.2e-47 191.0 126 80.2
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.4e-46 189.9 165 63.6
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 1.8e-46 189.5 122 79.5
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.8e-46 189.5 134 73.9
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 5.2e-46 188.0 137 69.3
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 8.9e-46 187.2 143 70.6
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 3.4e-45 185.3 143 68.5
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 3.4e-45 185.3 143 68.5
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 3.4e-45 185.3 164 63.4
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 5.8e-45 184.5 164 62.8
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 9.8e-45 183.7 128 75.8
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 9.8e-45 183.7 139 69.1
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 1.3e-44 183.3 148 68.2
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 1.3e-44 183.3 133 76.7
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 1.7e-44 183.0 136 71.3
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.2e-44 182.6 143 67.1
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 2.9e-44 182.2 162 62.3
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 4.9e-44 181.4 163 62.6
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 6.4e-44 181.0 161 63.4
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 6.4e-44 181.0 139 70.5
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 1.4e-43 179.9 126 73.0
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 7.0e-43 177.6 139 66.2
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 7.0e-43 177.6 120 75.0
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 9.2e-43 177.2 123 77.2
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.6e-42 176.4 163 59.5
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 4.6e-42 174.9 139 68.3
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 4.6e-42 174.9 129 66.7
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 4.6e-42 174.9 125 71.2
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 4.6e-42 174.9 127 71.7
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 6.0e-42 174.5 164 59.8
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 6.0e-42 174.5 143 65.0
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 6.0e-42 174.5 144 64.6
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 7.8e-42 174.1 113 77.9
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.0e-41 173.7 138 65.9
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 3.0e-41 172.2 128 66.4
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 5.0e-41 171.4 139 67.6
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 5.0e-41 171.4 138 66.7
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 6.6e-41 171.0 133 68.4
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 6.6e-41 171.0 133 68.4
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 6.6e-41 171.0 133 68.4
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 6.6e-41 171.0 164 58.5
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 8.6e-41 170.6 133 68.4
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 8.6e-41 170.6 133 68.4
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 8.6e-41 170.6 151 58.9
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 1.1e-40 170.2 135 66.7
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.1e-40 170.2 126 71.4
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.9e-40 169.5 127 68.5
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 2.5e-40 169.1 115 74.8
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 4.3e-40 168.3 130 69.2
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 5.6e-40 167.9 151 58.3
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 7.3e-40 167.5 116 74.1
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 1.6e-39 166.4 143 65.0
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 2.1e-39 166.0 159 57.9
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 2.1e-39 166.0 112 73.2
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 2.1e-39 166.0 127 68.5
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 3.6e-39 165.2 126 63.5
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 3.6e-39 165.2 141 64.5
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 6.2e-39 164.5 148 63.5
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 8.1e-39 164.1 162 58.6
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 6.8e-38 161.0 157 60.5
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 6.8e-38 161.0 103 76.7
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 1.5e-37 159.8 142 63.4
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 3.4e-37 158.7 148 59.5
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 4.4e-37 158.3 152 59.9
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 1.7e-36 156.4 154 57.1
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 2.2e-36 156.0 121 66.9
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 3.2e-35 152.1 124 65.3
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 7.1e-35 151.0 148 57.4
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.6e-34 149.8 115 65.2
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 1.0e-33 147.1 127 60.6
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 2.3e-33 146.0 122 61.5
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 1.1e-32 143.7 139 57.6
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 9.5e-32 140.6 96 72.9
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 4.7e-31 138.3 119 66.4
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 3.1e-30 135.6 132 59.1
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 4.0e-30 135.2 138 58.7
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 4.0e-30 135.2 125 57.6
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 4.0e-30 135.2 137 58.4
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.5e-29 133.3 104 70.2
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 1.3e-28 130.2 103 65.0
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 2.9e-28 129.0 123 54.5
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 3.8e-28 128.6 101 72.3
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 3.2e-27 125.6 96 70.8
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 3.2e-27 125.6 93 69.9
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 5.4e-27 124.8 101 66.3
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 3.0e-25 119.0 118 59.3
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 5.6e-24 114.8 120 50.8
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 9.0e-22 107.5 130 47.7
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 2.0e-21 106.3 71 63.4
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 4.4e-21 105.1 115 51.3
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 7.6e-21 104.4 159 45.3
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 2.7e-18 95.9 137 45.3
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 1.0e-17 94.0 115 45.2
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 1.7e-17 93.2 145 42.8
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 1.6e-15 86.7 109 46.8
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 6.9e-14 81.3 124 41.1
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 1.5e-13 80.1 124 40.3
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 2.2e-12 76.3 61 62.3
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 5.4e-11 71.6 134 37.3
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 7.1e-11 71.2 124 37.1


User provided reference genes

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