Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 7.3e-89 330.5 161 100.0
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 1.2e-67 260.0 156 80.8
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 3.3e-65 251.9 164 76.2
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 3.3e-65 251.9 163 74.8
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 9.6e-65 250.4 160 76.2
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.2e-64 250.0 160 76.9
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 8.1e-64 247.3 158 73.4
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.1e-63 246.9 159 76.1
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 3.1e-63 245.4 163 72.4
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 6.9e-63 244.2 158 72.8
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 6.9e-63 244.2 164 72.6
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 9.0e-63 243.8 170 71.2
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 4.4e-62 241.5 160 70.6
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 5.8e-62 241.1 156 71.8
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 7.6e-62 240.7 160 68.1
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.1e-60 236.9 156 70.5
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.4e-60 236.5 172 66.3
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 5.4e-60 234.6 156 74.4
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 4.6e-59 231.5 160 70.6
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 7.8e-59 230.7 156 70.5
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 1.0e-58 230.3 156 71.2
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 2.3e-58 229.2 157 71.3
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 1.1e-57 226.9 165 64.8
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 1.9e-57 226.1 169 66.3
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 4.3e-57 224.9 156 69.2
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 4.3e-57 224.9 159 67.3
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 5.6e-57 224.6 169 66.3
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 7.3e-57 224.2 149 71.1
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 3.6e-56 221.9 157 69.4
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 1.4e-55 219.9 173 64.2
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 3.4e-54 215.3 157 68.2
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 4.5e-54 214.9 170 63.5
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 5.8e-54 214.5 157 68.2
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 8.4e-53 210.7 165 64.2
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 8.4e-53 210.7 156 65.4
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.9e-52 209.5 154 64.3
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 3.2e-52 208.8 201 54.7
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 5.4e-52 208.0 156 64.7
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.6e-51 206.5 155 63.9
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 1.6e-51 206.5 156 65.4
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 6.0e-51 204.5 156 64.7
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 3.9e-50 201.8 172 59.3
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 8.7e-50 200.7 156 65.4
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.5e-49 199.9 170 60.6
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 1.9e-49 199.5 172 59.9
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 2.5e-49 199.1 171 60.2
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 4.3e-49 198.4 173 59.5
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 5.6e-49 198.0 169 60.4
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 9.6e-49 197.2 154 64.9
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 2.8e-48 195.7 160 59.4
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 3.7e-48 195.3 156 60.3
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 2.4e-47 192.6 190 53.7
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 3.1e-47 192.2 126 70.6
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 4.0e-47 191.8 158 58.2
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 6.9e-47 191.0 172 57.6
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 9.0e-47 190.7 174 56.9
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 4.5e-46 188.3 160 60.6
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 1.7e-45 186.4 155 57.4
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 2.2e-45 186.0 154 61.7
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 8.4e-45 184.1 155 58.1
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 2.4e-44 182.6 155 58.7
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 5.5e-44 181.4 147 57.1
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 3.0e-42 175.6 167 54.5
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 5.1e-42 174.9 156 55.1
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 1.3e-40 170.2 155 55.5
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 1.3e-40 170.2 156 53.8
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 4.8e-40 168.3 163 53.4
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 6.2e-40 167.9 158 54.4
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 6.2e-40 167.9 158 54.4
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 8.2e-40 167.5 158 55.1
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.1e-39 167.2 158 53.8
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 1.4e-39 166.8 153 55.6
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.4e-39 166.8 151 56.3
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 1.8e-39 166.4 158 53.8
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 2.4e-39 166.0 161 52.2
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.4e-39 166.0 163 53.4
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 3.1e-39 165.6 158 54.4
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 3.1e-39 165.6 158 54.4
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.2e-38 163.7 169 49.1
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.9e-37 159.1 155 52.9
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.9e-37 159.1 159 50.9
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 6.5e-37 157.9 155 50.3
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.2e-35 153.7 115 66.1
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 2.1e-35 152.9 154 48.7
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 2.1e-35 152.9 146 50.7
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 6.0e-35 151.4 154 47.4
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 6.7e-34 147.9 154 47.4
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 2.5e-33 146.0 136 53.7
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 2.4e-31 139.4 101 65.3
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 3.1e-31 139.0 153 45.8
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 9.0e-31 137.5 137 48.2
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 2.6e-30 136.0 80 80.0
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 7.2e-28 127.9 150 41.3
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 2.8e-24 115.9 106 50.9
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 3.4e-22 109.0 91 58.2
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 3.4e-22 109.0 119 48.7
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 2.2e-21 106.3 104 52.9
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.0e-18 97.4 76 63.2
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 3.0e-18 95.9 129 37.2
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 3.9e-18 95.5 95 47.4
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 8.5e-13 77.8 47 76.6
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 1.5e-09 67.0 50 58.0
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 1.8e-07 60.1 36 69.4


User provided reference genes

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