Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 6.9e-262 906.7 454 100.0
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 1.2e-205 719.9 454 79.7
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 3.3e-203 711.8 451 78.5
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 7.8e-197 690.6 452 77.9
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 3.1e-177 625.5 456 70.0
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 3.7e-170 602.1 456 66.9
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 4.0e-169 598.6 467 66.2
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 2.0e-168 596.3 451 66.7
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 7.6e-168 594.3 459 66.2
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 8.4e-167 590.9 455 65.7
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 1.9e-163 579.7 457 64.6
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 1.4e-161 573.5 457 63.7
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 5.8e-160 568.2 456 65.1
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 1.9e-158 563.1 453 63.4
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 9.3e-158 560.8 457 60.6
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 1.2e-157 560.5 457 60.4
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 6.0e-157 558.1 458 63.3
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 1.3e-154 550.4 456 62.5
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 1.1e-153 547.4 457 62.6
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 1.4e-153 547.0 461 61.8
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 5.3e-153 545.0 454 59.0
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.0e-151 540.8 434 63.8
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 2.3e-148 529.6 464 61.4
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 3.0e-148 529.3 456 57.2
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 3.3e-147 525.8 455 61.3
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.3e-147 525.4 460 60.9
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 1.3e-146 523.9 460 60.7
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 2.8e-146 522.7 495 58.8
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 6.3e-146 521.5 435 61.8
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 6.3e-146 521.5 456 61.4
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 8.2e-146 521.2 459 59.7
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 3.1e-145 519.2 460 60.4
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 4.1e-145 518.8 461 60.3
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 6.9e-145 518.1 409 64.8
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 1.5e-144 516.9 457 58.6
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.2e-143 513.1 463 60.0
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 8.5e-143 511.1 458 56.8
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 8.5e-143 511.1 459 55.3
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 7.2e-142 508.1 463 55.5
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.6e-141 506.9 463 55.3
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 2.7e-141 506.1 461 54.7
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 3.6e-141 505.8 497 53.5
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 4.4e-139 498.8 449 57.2
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 5.7e-139 498.4 456 56.8
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 7.4e-139 498.0 460 56.1
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 8.2e-138 494.6 454 55.3
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 5.3e-137 491.9 456 55.9
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 9.1e-137 491.1 459 52.5
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 1.2e-136 490.7 455 54.3
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 4.5e-136 488.8 450 55.1
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 5.0e-135 485.3 461 52.7
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 5.0e-135 485.3 462 53.9
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 1.4e-134 483.8 379 65.2
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 2.5e-134 483.0 453 57.8
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 4.2e-134 482.3 453 53.0
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 1.2e-133 480.7 471 55.4
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 1.6e-133 480.3 460 56.3
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 4.7e-133 478.8 467 54.4
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 6.1e-133 478.4 459 52.1
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 8.0e-133 478.0 472 55.1
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 3.9e-132 475.7 453 54.3
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 1.5e-131 473.8 465 54.4
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 2.6e-131 473.0 453 53.0
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 1.7e-130 470.3 463 54.0
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 2.8e-130 469.5 465 54.4
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 3.7e-130 469.2 455 52.1
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 4.8e-130 468.8 445 54.6
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 1.8e-129 466.8 496 52.6
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 7.0e-129 464.9 453 52.8
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 5.9e-128 461.8 453 51.0
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 1.3e-127 460.7 454 51.3
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 1.5e-126 457.2 454 52.0
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 4.2e-126 455.7 455 51.6
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 5.2e-124 448.7 401 59.1
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 6.7e-124 448.4 453 50.6
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 8.2e-122 441.4 454 50.9
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 7.7e-120 434.9 470 49.1
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 1.5e-118 430.6 454 49.8
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 2.5e-118 429.9 457 49.7
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 1.2e-117 427.6 461 50.8
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 1.6e-117 427.2 444 53.2
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 4.7e-117 425.6 466 48.1
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 4.8e-114 415.6 561 44.9
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 3.1e-113 412.9 439 49.7
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 1.2e-112 411.0 466 47.6
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 2.0e-112 410.2 461 49.5
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 4.5e-112 409.1 467 49.0
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 1.3e-111 407.5 462 49.1
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 1.1e-110 404.4 334 61.4
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.9e-102 377.1 470 45.1
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 8.0e-101 371.7 460 46.7
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 6.0e-96 355.5 460 43.9
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 7.8e-96 355.1 369 51.8
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 3.1e-92 343.2 370 47.3
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 4.9e-90 335.9 466 42.9
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-87 327.4 478 41.0
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 9.5e-86 321.6 464 41.4
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 2.9e-82 310.1 455 40.4
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 1.2e-80 304.7 354 45.8
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 1.0e-79 301.6 479 39.2
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 1.0e-79 301.6 457 39.6
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 8.9e-76 288.5 358 45.8
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 4.4e-75 286.2 214 69.2
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 8.7e-71 271.9 375 41.3
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 3.0e-63 246.9 291 48.5
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 2.4e-52 210.7 197 56.3
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 2.9e-50 203.8 345 37.1
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 6.3e-37 159.5 438 29.0
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 1.1e-36 158.7 270 38.1
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 2.6e-35 154.1 453 26.7
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 5.0e-34 149.8 208 38.5
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 7.4e-30 136.0 115 60.0
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 6.9e-28 129.4 261 34.5
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 3.2e-25 120.6 135 49.6
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 7.9e-24 115.9 180 38.3
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 5.7e-22 109.8 133 47.4
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 3.1e-20 104.0 90 57.8
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 1.2e-19 102.1 310 24.5
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 5.9e-19 99.8 428 25.7
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-18 98.2 108 47.2
CBR_g12009 Chara braunii HOM05D006101 ORTHO05D007422 2.8e-13 80.9 489 20.7
SEGI_15616 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 1.0e-07 62.4 77 41.6
Glyma.09G075800 Glycine max HOM05D006101 ORTHO05D007422 8.8e-07 59.3 57 52.6
arahy.Tifrunner.gnm1.ann1.AAV4SA Arachis hypogaea HOM05D006101 ORTHO05D007422 2.0e-06 58.2 93 38.7


User provided reference genes

Program Settings