Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p014911 Quercus lobata HOM05D009482 ORTHO05D011588 2.0e-54 215.3 96 100.0
Haze_23534 Corylus avellana HOM05D004783 ORTHO05D005581 6.8e-26 120.6 88 59.1
Thecc.04G235400 Theobroma cacao HOM05D009482 ORTHO05D011588 8.9e-26 120.2 85 65.9
Haze_23529 Corylus avellana HOM05D009482 ORTHO05D011588 3.4e-25 118.2 85 61.2
Haze_23531 Corylus avellana HOM05D009482 ORTHO05D011588 7.5e-25 117.1 85 61.2
COL.COLO4_21519 Corchorus olitorius HOM05D009482 ORTHO05D011588 6.4e-24 114.0 65 70.8
Ciclev10033959m.g Citrus clementina HOM05D009482 ORTHO05D011588 7.1e-23 110.5 92 57.6
Gohir.D09G056000 Gossypium hirsutum HOM05D009482 ORTHO05D011588 9.2e-23 110.2 89 57.3
Gorai.006G069500 Gossypium raimondii HOM05D009482 ORTHO05D011588 9.2e-23 110.2 89 57.3
Gohir.A09G056800 Gossypium hirsutum HOM05D009482 ORTHO05D011588 1.3e-21 106.3 90 55.6
Glyma.20G146400 Glycine max HOM05D009482 ORTHO05D011588 3.9e-21 104.8 87 52.9
Ciclev10007023m.g Citrus clementina HOM05D009482 ORTHO05D011588 8.6e-21 103.6 83 57.8
Nitab4.5_0002307g0050 Nicotiana tabacum HOM05D009482 ORTHO05D011588 1.5e-20 102.8 85 51.8
Prupe.1G017600 Prunus persica HOM05D009482 ORTHO05D011588 1.5e-20 102.8 96 49.0
TWI09G1056 Tripterygium wilfordii HOM05D009482 ORTHO05D011588 1.5e-20 102.8 94 48.9
CANSAT78G2285 Cannabis sativa HOM05D009482 ORTHO05D011588 1.9e-20 102.4 82 53.7
Nitab4.5_0004062g0040 Nicotiana tabacum HOM05D009482 ORTHO05D011588 4.3e-20 101.3 85 51.8
Dinv44557 Davidia involucrata HOM05D009482 ORTHO05D011588 7.3e-20 100.5 96 52.1
Atru.chr4.2425 Acer truncatum HOM05D009482 ORTHO05D011588 1.6e-19 99.4 86 50.0
Dinv44558 Davidia involucrata HOM05D009482 ORTHO05D011588 1.5e-17 92.8 96 50.0
Psat5g033040 Pisum sativum HOM05D009482 ORTHO05D011588 9.9e-17 90.1 93 48.4
Nitab4.5_0004062g0020 Nicotiana tabacum HOM05D009482 ORTHO05D011588 2.9e-16 88.6 80 48.8
Potri.010G084600 Populus trichocarpa HOM05D009482 ORTHO05D011588 4.6e-14 81.3 96 45.8
Medtr1g042770 Medicago truncatula HOM05D009482 ORTHO05D011588 6.6e-13 77.4 94 40.4
Prupe.1G017500 Prunus persica HOM05D009482 ORTHO05D011588 6.6e-13 77.4 86 44.2
DCAR_024175 Daucus carota HOM05D000011 ORTHO05D000018 9.6e-12 73.6 84 39.3
Medtr3g105840 Medicago truncatula HOM05D009482 ORTHO05D011588 1.1e-10 70.1 73 41.1
Haze_11467 Corylus avellana HOM05D009482 ORTHO05D011588 2.4e-10 68.9 57 56.1


User provided reference genes

Program Settings