Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 2.9e-54 214.9 105 100.0
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.3e-25 119.8 108 62.0
Haze_23519 Corylus avellana HOM05D005304 ORTHO05D004438 1.0e-22 110.2 150 48.7
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 3.8e-22 108.2 113 56.6
Cfa010131 Carpinus fangiana HOM05D005304 ORTHO05D004438 8.0e-20 100.5 145 46.2
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 8.8e-19 97.1 115 50.4
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 2.0e-18 95.9 93 53.8
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 4.4e-18 94.7 77 61.0
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 6.3e-17 90.9 114 54.4
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.1e-16 90.1 121 49.6
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.4e-16 89.7 122 49.2
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 1.8e-16 89.4 77 57.1
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 3.1e-16 88.6 76 60.5
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.2e-15 86.7 124 46.0
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.6e-15 86.3 103 47.6
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 2.0e-15 85.9 118 48.3
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 2.0e-15 85.9 121 46.3
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 7.7e-15 84.0 110 45.5
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 1.7e-14 82.8 98 54.1
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 2.2e-14 82.4 73 60.3
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 5.0e-14 81.3 90 51.1
FAN16G1536 Fragaria x ananassa HOM05D025255 ORTHO05D004438 5.0e-14 81.3 72 62.5
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 8.5e-14 80.5 95 49.5
FAN11G2118 Fragaria x ananassa HOM05D025255 ORTHO05D004438 8.5e-14 80.5 114 45.6
RcHm_v2.0_Chr5g0056381 Rosa chinensis HOM05D025255 ORTHO05D004438 1.5e-13 79.7 115 44.3
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 3.2e-13 78.6 101 49.5
Eucgr.J00398 Eucalyptus grandis HOM05D005304 ORTHO05D004438 3.2e-13 78.6 84 58.3
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 3.2e-13 78.6 78 59.0
Eucgr.B03916 Eucalyptus grandis HOM05D005304 ORTHO05D004438 9.5e-13 77.0 114 50.0
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 9.5e-13 77.0 81 46.9
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 9.5e-13 77.0 81 53.1
PGR102G2181 Punica granatum HOM05D005304 ORTHO05D004438 3.6e-12 75.1 120 41.7
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 4.7e-12 74.7 79 55.7
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 4.7e-12 74.7 75 52.0
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 4.7e-12 74.7 80 50.0
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.1e-12 74.3 79 54.4
FAN21G1648 Fragaria x ananassa HOM05D025255 ORTHO05D004438 8.0e-12 73.9 60 65.0
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 8.0e-12 73.9 72 52.8
FvH4_3g30440 Fragaria vesca HOM05D025255 ORTHO05D004438 1.4e-11 73.2 102 46.1
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 1.8e-11 72.8 80 50.0
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 4.0e-11 71.6 68 51.5
ClCG01G013950 Citrullus lanatus HOM05D026992 ORTHO05D004438 6.8e-11 70.9 79 57.0
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 6.8e-11 70.9 78 44.9
Atru.chr3.3495 Acer truncatum HOM05D005304 ORTHO05D004438 8.8e-11 70.5 102 50.0
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 8.8e-11 70.5 78 47.4
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 2.0e-10 69.3 71 50.7
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.0e-10 69.3 83 45.8
Gorai.001G117700 Gossypium raimondii HOM05D005304 ORTHO05D004438 3.4e-10 68.6 79 51.9
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 3.4e-10 68.6 82 46.3
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 4.4e-10 68.2 93 48.4
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 4.4e-10 68.2 80 53.8
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 7.5e-10 67.4 79 49.4
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 9.8e-10 67.0 80 48.8
MELO3C035553.2 Cucumis melo HOM05D026992 ORTHO05D004438 9.8e-10 67.0 80 56.2
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 9.8e-10 67.0 74 48.6
Potri.001G212300 Populus trichocarpa HOM05D005304 ORTHO05D004438 9.8e-10 67.0 148 39.9
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 1.7e-09 66.2 59 64.4
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 2.2e-09 65.9 110 40.9
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 2.8e-09 65.5 88 37.5
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 2.8e-09 65.5 76 42.1
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 2.8e-09 65.5 101 42.6
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 4.9e-09 64.7 110 40.9
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 6.3e-09 64.3 82 47.6
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.3e-09 64.3 79 48.1
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 6.3e-09 64.3 65 49.2
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 6.3e-09 64.3 62 46.8
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 6.3e-09 64.3 77 45.5
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 8.3e-09 63.9 75 48.0
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 8.3e-09 63.9 79 48.1
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 8.3e-09 63.9 79 48.1
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 8.3e-09 63.9 80 42.5
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 1.1e-08 63.5 74 45.9
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 1.4e-08 63.2 90 46.7
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 1.4e-08 63.2 74 45.9
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 1.4e-08 63.2 86 43.0
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.8e-08 62.8 76 48.7
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.8e-08 62.8 96 47.9
Oeu026982.1 Olea europaea HOM05D047474 ORTHO05D004438 2.4e-08 62.4 100 44.0
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 3.1e-08 62.0 80 46.2
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 3.1e-08 62.0 77 44.2
CsaV3_1G014250 Cucumis sativus L. HOM05D026992 ORTHO05D004438 4.1e-08 61.6 55 61.8
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 4.1e-08 61.6 65 44.6
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 4.1e-08 61.6 77 41.6
Glyma.10G199500 Glycine max HOM05D005304 ORTHO05D004438 4.1e-08 61.6 65 43.1
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 5.4e-08 61.2 77 45.5
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 5.4e-08 61.2 77 49.4
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 5.4e-08 61.2 61 49.2
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 7.0e-08 60.8 77 49.4
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 7.0e-08 60.8 64 46.9
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 9.2e-08 60.5 80 42.5
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 9.2e-08 60.5 76 43.4
Migut.F01597 Erythranthe guttata HOM05D005304 ORTHO05D004438 1.2e-07 60.1 82 46.3
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.2e-07 60.1 78 47.4
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 1.2e-07 60.1 81 45.7
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 1.6e-07 59.7 84 41.7
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.6e-07 59.7 66 51.5
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.0e-07 59.3 78 47.4
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 2.0e-07 59.3 65 50.8
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 2.0e-07 59.3 72 48.6
Oeu026980.1 Olea europaea HOM05D047474 ORTHO05D004438 3.5e-07 58.5 100 43.0
Lalb_Chr06g0170051 Lupinus albus HOM05D005304 ORTHO05D004438 4.5e-07 58.2 61 47.5
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 4.5e-07 58.2 101 41.6
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 5.9e-07 57.8 96 37.5
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 5.9e-07 57.8 66 48.5
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 5.9e-07 57.8 79 50.6
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 5.9e-07 57.8 90 38.9
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 5.9e-07 57.8 90 38.9
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 7.7e-07 57.4 72 43.1
Eucgr.J01032 Eucalyptus grandis HOM05D005304 ORTHO05D004438 7.7e-07 57.4 64 45.3
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 1.3e-06 56.6 72 47.2
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 1.7e-06 56.2 66 45.5
TPR.G37843 Trifolium pratense HOM05D005304 ORTHO05D004438 1.7e-06 56.2 63 46.0
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.3e-06 55.8 118 36.4
VMungo1127G0478 Vigna mungo HOM05D014522 ORTHO05D004438 2.3e-06 55.8 83 43.4
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.9e-06 55.5 118 36.4
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 2.9e-06 55.5 118 36.4
Sed0006013 Sechium edule HOM05D005304 ORTHO05D004438 2.9e-06 55.5 79 39.2
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 3.8e-06 55.1 85 38.8
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 3.8e-06 55.1 109 33.9
Nitab4.5_0001163g0010 Nicotiana tabacum HOM05D005304 ORTHO05D004438 5.0e-06 54.7 60 56.7
Sabra08G0019700 Salix brachista HOM05D005304 ORTHO05D004438 5.0e-06 54.7 92 46.7
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 5.0e-06 54.7 109 41.3
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 6.6e-06 54.3 89 42.7
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 6.6e-06 54.3 54 53.7
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 6.6e-06 54.3 68 44.1
THA.LOC104827410 Tarenaya hassleriana HOM05D010843 ORTHO05D012975 6.6e-06 54.3 88 42.0
MSTRG.9124 Avicennia marina HOM05D005304 ORTHO05D004438 8.6e-06 53.9 66 45.5
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 8.6e-06 53.9 50 54.0
Sopen06g031160 Solanum pennellii HOM05D005304 ORTHO05D004438 8.6e-06 53.9 73 46.6
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 8.6e-06 53.9 99 36.4


User provided reference genes

Program Settings