Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 1.2e-97 359.8 173 100.0
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 1.9e-34 149.8 173 48.0
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 1.6e-33 146.7 173 45.7
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 3.6e-33 145.6 173 46.8
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 6.1e-33 144.8 168 46.4
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 7.9e-33 144.4 173 45.7
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.4e-32 143.7 168 45.2
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 1.8e-32 143.3 170 45.3
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 2.3e-32 142.9 79 77.2
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 3.0e-32 142.5 161 49.1
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 6.7e-32 141.4 173 43.9
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 6.7e-32 141.4 171 45.0
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 8.8e-32 141.0 161 47.8
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.1e-31 140.6 168 45.2
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 1.1e-31 140.6 168 44.6
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 1.1e-31 140.6 165 47.3
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 2.6e-31 139.4 161 46.0
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 4.4e-31 138.7 83 74.7
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 5.7e-31 138.3 85 72.9
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 7.4e-31 137.9 171 45.0
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 9.7e-31 137.5 77 76.6
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 9.7e-31 137.5 161 45.3
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.3e-30 137.1 160 46.2
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.3e-30 137.1 77 74.0
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 2.2e-30 136.3 170 44.7
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 3.7e-30 135.6 75 76.0
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 3.7e-30 135.6 173 42.8
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 8.2e-30 134.4 90 70.0
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.1e-29 134.0 77 74.0
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 1.1e-29 134.0 173 42.2
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 1.8e-29 133.3 173 41.6
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 2.4e-29 132.9 74 75.7
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 3.1e-29 132.5 170 43.5
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 3.1e-29 132.5 76 76.3
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 3.1e-29 132.5 173 42.2
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.1e-29 132.1 74 75.7
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 5.3e-29 131.7 79 69.6
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 5.3e-29 131.7 77 72.7
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 5.3e-29 131.7 77 72.7
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 9.1e-29 131.0 173 42.2
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 1.2e-28 130.6 79 69.6
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 1.5e-28 130.2 118 53.4
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 1.5e-28 130.2 157 43.3
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 2.0e-28 129.8 77 72.7
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 2.6e-28 129.4 79 69.6
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 2.6e-28 129.4 173 41.6
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 5.9e-28 128.3 102 59.8
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 5.9e-28 128.3 79 67.1
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 5.9e-28 128.3 82 73.2
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 1.0e-27 127.5 79 69.6
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.7e-27 126.7 77 67.5
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 2.2e-27 126.3 79 67.1
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 2.2e-27 126.3 79 67.1
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 2.2e-27 126.3 171 41.5
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 2.2e-27 126.3 79 65.8
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 2.9e-27 125.9 175 40.6
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 2.9e-27 125.9 74 75.7
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 2.9e-27 125.9 161 44.7
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 6.5e-27 124.8 172 41.3
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 8.5e-27 124.4 171 40.4
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-26 124.0 173 41.0
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.1e-26 124.0 173 41.0
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.5e-26 123.6 77 70.1
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 1.9e-26 123.2 77 67.5
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.9e-26 123.2 77 70.1
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 2.5e-26 122.9 165 41.2
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 3.2e-26 122.5 79 65.8
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 4.2e-26 122.1 76 73.7
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.6e-25 120.2 173 40.5
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 2.7e-25 119.4 93 60.2
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 2.7e-25 119.4 173 39.9
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 4.7e-25 118.6 74 70.3
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 6.1e-25 118.2 76 69.7
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 6.1e-25 118.2 79 65.8
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.0e-25 117.9 173 39.9
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 8.0e-25 117.9 173 39.9
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 1.4e-24 117.1 98 55.1
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 2.3e-24 116.3 79 63.3
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 3.0e-24 115.9 76 64.5
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 4.0e-24 115.5 177 39.5
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 4.0e-24 115.5 83 62.7
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 5.2e-24 115.2 174 40.2
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.1e-23 114.0 69 73.9
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 1.5e-23 113.6 77 66.2
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 2.6e-23 112.8 156 40.4
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 3.3e-23 112.5 174 37.9
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 4.4e-23 112.1 174 37.9
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 4.4e-23 112.1 174 37.9
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 4.4e-23 112.1 174 37.9
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 4.4e-23 112.1 174 37.9
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 4.4e-23 112.1 174 37.4
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 5.7e-23 111.7 174 37.9
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 7.5e-23 111.3 174 39.1
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 1.3e-22 110.5 174 37.4
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 1.3e-22 110.5 83 56.6
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.3e-22 110.5 83 57.8
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.3e-22 110.5 83 57.8
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 1.3e-22 110.5 174 38.5
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 1.7e-22 110.2 174 36.8
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.7e-22 110.2 72 65.3
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.8e-22 109.4 79 62.0
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.7e-22 109.0 173 38.2
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 4.8e-22 108.6 174 37.4
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 6.3e-22 108.2 174 37.4
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 8.2e-22 107.8 174 37.4
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 1.8e-21 106.7 74 67.6
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 3.1e-21 105.9 174 37.4
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 3.1e-21 105.9 174 36.8
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 5.3e-21 105.1 72 65.3
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 1.2e-20 104.0 77 61.0
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 1.2e-20 104.0 72 61.1
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.6e-20 103.6 174 37.4
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 3.5e-20 102.4 75 57.3
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 2.2e-19 99.8 82 50.0
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 2.2e-19 99.8 74 59.5
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 1.9e-18 96.7 83 48.2
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 2.4e-13 79.7 136 34.6
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 2.7e-12 76.3 174 31.0
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 2.7e-12 76.3 136 33.8
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 3.8e-11 72.4 125 35.2
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 5.0e-11 72.0 56 60.7
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 4.2e-10 68.9 39 79.5
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 4.2e-10 68.9 39 74.4
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 1.6e-09 67.0 81 35.8
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 2.1e-09 66.6 39 66.7
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 3.4e-07 59.3 119 33.6
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 7.5e-07 58.2 37 67.6


User provided reference genes

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