Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p012505 Quercus lobata HOM05D001448 ORTHO05D007592 2.2e-49 198.7 105 100.0
Haze_23395 Corylus avellana HOM05D001448 ORTHO05D007592 4.2e-21 104.8 78 80.8
Phvul.011G093100 Phaseolus vulgaris HOM05D001448 ORTHO05D007592 1.3e-17 93.2 76 67.1
Prupe.6G127600 Prunus persica HOM05D001448 ORTHO05D007592 1.7e-17 92.8 73 67.1
VMungo1127G0024 Vigna mungo HOM05D001448 ORTHO05D007592 8.3e-17 90.5 76 64.5
Glyma.11G184100 Glycine max HOM05D001448 ORTHO05D007592 4.1e-16 88.2 76 64.5
Glyma.12G088300 Glycine max HOM05D001448 ORTHO05D007592 9.1e-16 87.0 76 64.5
Manes.11G160900 Manihot esculenta HOM05D001448 ORTHO05D007592 1.2e-15 86.7 75 65.3
Nitab4.5_0000234g0160 Nicotiana tabacum HOM05D001448 ORTHO05D007592 2.0e-15 85.9 77 68.8
Sed0012598 Sechium edule HOM05D001448 ORTHO05D007592 2.7e-15 85.5 81 65.4
Psat7g189040 Pisum sativum HOM05D001448 ORTHO05D007592 4.5e-15 84.7 77 63.6
Peaxi162Scf01281g00019 Petunia axillaris HOM05D001448 ORTHO05D007592 5.9e-15 84.3 76 61.8
SGA_v2.0_scaffold22G09874 Striga asiatica HOM05D001448 ORTHO05D007592 7.7e-15 84.0 78 66.7
Gorai.009G086300 Gossypium raimondii HOM05D001448 ORTHO05D007592 1.7e-14 82.8 77 61.0
GSVIVG01036149001 Vitis vinifera HOM05D001448 ORTHO05D007592 1.7e-14 82.8 79 63.3
MD03G1142500 Malus domestica HOM05D001448 ORTHO05D007592 2.2e-14 82.4 73 63.0
Gohir.A05G081400 Gossypium hirsutum HOM05D001448 ORTHO05D007592 3.8e-14 81.6 77 59.7
PGR119G1891 Punica granatum HOM05D001448 ORTHO05D007592 6.5e-14 80.9 93 59.1
Oeu002382.1 Olea europaea HOM05D001448 ORTHO05D007592 1.1e-13 80.1 79 60.8
Lalb_Chr19g0136551 Lupinus albus HOM05D001448 ORTHO05D007592 1.9e-13 79.3 77 64.9
Ciclev10027891m.g Citrus clementina HOM05D001448 ORTHO05D007592 3.2e-13 78.6 76 64.5
Eucgr.J00484 Eucalyptus grandis HOM05D001448 ORTHO05D007592 4.2e-13 78.2 76 57.9
Actinidia24207 Actinidia chinensis HOM05D001448 ORTHO05D007592 7.2e-13 77.4 78 61.5
Ca_19400_v3 Cicer arietinum L. HOM05D001448 ORTHO05D007592 7.2e-13 77.4 77 62.3
Medtr4g053530 Medicago truncatula HOM05D001448 ORTHO05D007592 2.7e-12 75.5 79 62.0
AL6G33490 Arabidopsis lyrata HOM05D001448 ORTHO05D007592 8.0e-12 73.9 77 59.7
Nitab4.5_0002914g0020 Nicotiana tabacum HOM05D001448 ORTHO05D007592 8.0e-12 73.9 76 59.2
Potri.009G143900 Populus trichocarpa HOM05D001448 ORTHO05D007592 5.2e-11 71.2 78 55.1
FAN25G3414 Fragaria x ananassa HOM05D001448 ORTHO05D007592 8.8e-11 70.5 75 60.0
Carub.0006s2021 Capsella rubella HOM05D001448 ORTHO05D007592 1.2e-10 70.1 78 57.7
CsaV3_6G015040 Cucumis sativus L. HOM05D001448 ORTHO05D007592 1.2e-10 70.1 58 69.0
FAN11G3386 Fragaria x ananassa HOM05D001448 ORTHO05D007592 1.2e-10 70.1 75 61.3
CSS0038139 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D007592 2.0e-10 69.3 56 62.5
Sabra09G0111600 Salix brachista HOM05D001448 ORTHO05D007592 2.6e-10 68.9 79 53.2
Sabra09G0114300 Salix brachista HOM05D001448 ORTHO05D007592 2.6e-10 68.9 79 53.2
TWI31G0173 Tripterygium wilfordii HOM05D001448 ORTHO05D007592 2.6e-10 68.9 57 63.2
FAN21G2771 Fragaria x ananassa HOM05D001448 ORTHO05D007592 3.4e-10 68.6 75 60.0
Cpa.g.sc32.96 Carica papaya HOM05D001448 ORTHO05D007592 4.4e-10 68.2 89 51.7
Sopen11g026940 Solanum pennellii HOM05D001448 ORTHO05D007592 4.4e-10 68.2 80 55.0
Thhalv10015477m.g Eutrema salsugineum HOM05D001448 ORTHO05D007592 7.5e-10 67.4 77 55.8
FAN16G1878 Fragaria x ananassa HOM05D001448 ORTHO05D007592 7.5e-10 67.4 75 60.0
Nitab4.5_0017202g0010 Nicotiana tabacum HOM05D001448 ORTHO05D007592 7.5e-10 67.4 78 57.7
CARHR191060 Cardamine hirsuta HOM05D001448 ORTHO05D007592 9.8e-10 67.0 77 55.8
CAN.G942.10 Capsicum annuum HOM05D001448 ORTHO05D007592 2.2e-09 65.9 81 53.1
Nitab4.5_0000227g0200 Nicotiana tabacum HOM05D001448 ORTHO05D007592 2.8e-09 65.5 76 53.9
Solyc11g067250.3 Solanum lycopersicum HOM05D001448 ORTHO05D007592 2.8e-09 65.5 79 54.4
AT5G22470 Arabidopsis thaliana HOM05D001448 ORTHO05D007592 3.7e-09 65.1 78 56.4
THA.LOC104799546 Tarenaya hassleriana HOM05D001448 ORTHO05D007592 3.7e-09 65.1 76 53.9
Sp6g22780 Schrenkiella parvula HOM05D001448 ORTHO05D007592 4.9e-09 64.7 77 55.8
Aa31LG1G13100 Aethionema arabicum HOM05D001448 ORTHO05D007592 8.3e-09 63.9 77 54.5
PGSC0003DMG400007402 Solanum tuberosum HOM05D001448 ORTHO05D007592 1.4e-08 63.2 80 51.2
Gohir.D05G084400 Gossypium hirsutum HOM05D001448 ORTHO05D007592 1.8e-08 62.8 56 60.7
TPR.G17213 Trifolium pratense HOM05D001448 ORTHO05D007592 4.1e-08 61.6 58 56.9
BraA10t43915Z Brassica rapa HOM05D001448 ORTHO05D007592 9.2e-08 60.5 77 53.2
SalBow6G6699 Salvia bowleyana HOM05D001448 ORTHO05D007592 2.0e-07 59.3 93 48.4
BcaB08g36428 Brassica carinata HOM05D001448 ORTHO05D007592 3.5e-07 58.5 77 53.2
BcaC04g19576 Brassica carinata HOM05D001448 ORTHO05D007592 4.5e-07 58.2 77 51.9
C09p54120 Brassica napus HOM05D001448 ORTHO05D007592 4.5e-07 58.2 77 51.9
BolC9t58283H Brassica oleracea HOM05D001448 ORTHO05D007592 4.5e-07 58.2 77 51.9
Peaxi162Scf00757g00223 Petunia axillaris HOM05D001448 ORTHO05D007592 7.7e-07 57.4 78 55.1
Atru.chr3.3289 Acer truncatum HOM05D001448 ORTHO05D007592 1.3e-06 56.6 78 51.3
HanXRQChr13g0397241 Helianthus annuus HOM05D001448 ORTHO05D007592 1.7e-06 56.2 78 50.0
ClCG02G022180 Citrullus lanatus HOM05D001448 ORTHO05D007592 2.3e-06 55.8 78 47.4
TAR623G0709 Trochodendron aralioides HOM05D001448 ORTHO05D007592 2.3e-06 55.8 67 50.7
A10p18350 Brassica napus HOM05D001448 ORTHO05D007592 2.9e-06 55.5 103 41.7
RcHm_v2.0_Chr5g0044231 Rosa chinensis HOM05D001448 ORTHO05D007592 6.6e-06 54.3 54 57.4


User provided reference genes

Program Settings