Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 7.5e-98 360.5 184 100.0
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.1e-61 240.4 178 71.9
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 3.9e-46 188.7 172 60.5
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 3.7e-44 182.2 167 64.7
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 2.3e-38 162.9 179 51.4
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 1.6e-36 156.8 183 49.2
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 3.7e-36 155.6 95 81.1
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 1.8e-35 153.3 151 53.0
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 1.2e-34 150.6 142 57.7
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 5.8e-34 148.3 127 59.1
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 7.6e-34 147.9 131 56.5
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 1.3e-33 147.1 178 47.8
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 2.2e-33 146.4 162 54.9
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 5.0e-33 145.2 179 49.7
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.1e-32 144.1 141 52.5
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 3.2e-32 142.5 132 59.1
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 4.2e-32 142.1 124 62.9
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 5.5e-32 141.7 187 48.1
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 1.2e-31 140.6 108 64.8
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 2.7e-31 139.4 150 54.7
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 3.5e-31 139.0 167 48.5
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 4.6e-31 138.7 175 46.9
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 4.6e-31 138.7 131 54.2
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 1.0e-30 137.5 184 45.1
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 1.8e-30 136.7 131 56.5
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 1.8e-30 136.7 131 56.5
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.3e-30 136.3 173 42.8
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 2.3e-30 136.3 133 55.6
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 3.0e-30 136.0 104 65.4
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 3.9e-30 135.6 139 48.9
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 5.1e-30 135.2 171 48.0
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.1e-30 135.2 104 65.4
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 6.7e-30 134.8 131 51.9
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 8.7e-30 134.4 185 47.0
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 1.1e-29 134.0 143 52.4
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.1e-29 134.0 143 52.4
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.1e-29 134.0 143 52.4
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.9e-29 133.3 182 47.3
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 1.9e-29 133.3 147 51.7
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 2.5e-29 132.9 133 53.4
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 3.3e-29 132.5 123 56.9
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 3.3e-29 132.5 131 52.7
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 3.3e-29 132.5 188 43.1
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 4.3e-29 132.1 108 60.2
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 4.3e-29 132.1 96 67.7
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 4.3e-29 132.1 145 52.4
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 7.4e-29 131.3 100 62.0
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-28 130.6 143 51.7
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 1.6e-28 130.2 130 53.1
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 1.6e-28 130.2 139 51.8
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 2.2e-28 129.8 114 57.0
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 2.2e-28 129.8 131 52.7
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 3.7e-28 129.0 139 51.1
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 3.7e-28 129.0 161 47.2
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 3.7e-28 129.0 131 55.0
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 3.7e-28 129.0 100 62.0
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 4.8e-28 128.6 131 54.2
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 6.3e-28 128.3 135 49.6
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-28 127.9 129 52.7
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.1e-27 127.5 126 54.0
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 1.4e-27 127.1 166 45.8
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 1.4e-27 127.1 166 45.8
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 3.1e-27 125.9 108 58.3
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 3.1e-27 125.9 108 58.3
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 3.1e-27 125.9 116 55.2
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 4.1e-27 125.6 108 58.3
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 5.3e-27 125.2 101 60.4
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 5.3e-27 125.2 179 43.0
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 5.3e-27 125.2 131 54.2
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 6.9e-27 124.8 139 51.1
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 9.0e-27 124.4 132 52.3
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 1.2e-26 124.0 131 51.9
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 3.4e-26 122.5 131 52.7
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 3.4e-26 122.5 131 52.7
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 4.5e-26 122.1 131 53.4
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 4.5e-26 122.1 144 46.5
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 4.5e-26 122.1 131 49.6
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 7.7e-26 121.3 132 47.7
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-25 120.6 104 61.5
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 1.7e-25 120.2 139 50.4
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 3.8e-25 119.0 132 51.5
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 5.0e-25 118.6 157 41.4
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 5.0e-25 118.6 145 46.2
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 6.5e-25 118.2 182 40.1
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.5e-25 118.2 154 46.1
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 8.5e-25 117.9 132 52.3
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 8.5e-25 117.9 131 51.9
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 1.1e-24 117.5 131 48.1
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 1.9e-24 116.7 169 43.8
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 2.5e-24 116.3 99 56.6
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 5.5e-24 115.2 152 46.1
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 3.6e-23 112.5 106 57.5
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 6.1e-23 111.7 166 40.4
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 7.9e-23 111.3 107 52.3
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 1.8e-22 110.2 107 51.4
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 1.8e-22 110.2 109 59.6
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.0e-22 109.4 149 45.6
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 5.1e-22 108.6 105 50.5
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 2.0e-21 106.7 84 63.1
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 4.3e-21 105.5 178 39.3
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 9.7e-21 104.4 105 52.4
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.3e-20 104.0 98 58.2
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 1.7e-20 103.6 200 35.0
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 3.7e-20 102.4 155 42.6
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 1.4e-19 100.5 107 49.5
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 1.4e-19 100.5 87 57.5
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 4.1e-19 99.0 105 50.5
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 9.1e-19 97.8 148 41.2
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 4.5e-18 95.5 126 38.1
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 7.2e-16 88.2 79 55.7
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 2.3e-14 83.2 59 67.8
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 3.0e-14 82.8 140 33.6
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 6.7e-14 81.6 120 38.3
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 8.8e-14 81.3 68 58.8
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 1.1e-13 80.9 62 62.9
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 1.5e-13 80.5 171 36.3
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 5.7e-13 78.6 141 34.8
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 1.7e-12 77.0 170 32.9
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 1.1e-11 74.3 140 37.9
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 4.2e-08 62.4 48 56.2


User provided reference genes

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