Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 1.3e-209 733.4 554 100.0
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 2.3e-65 254.2 556 60.6
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 1.4e-54 218.4 559 53.5
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 4.0e-54 216.9 417 39.3
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 2.5e-48 197.6 516 59.5
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 1.8e-46 191.4 557 45.1
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 4.5e-45 186.8 560 50.2
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 1.3e-44 185.3 557 53.9
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 6.0e-42 176.4 422 36.0
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 1.9e-40 171.4 556 49.8
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.6e-39 168.3 560 50.2
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.1e-38 165.6 350 34.9
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.1e-38 165.6 350 34.9
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 5.0e-36 156.8 559 47.8
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 6.1e-34 149.8 556 50.9
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 6.1e-34 149.8 555 51.0
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 7.9e-34 149.4 561 47.4
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 7.9e-34 149.4 556 47.3
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 1.3e-33 148.7 554 50.9
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 5.1e-33 146.7 348 33.6
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 6.7e-33 146.4 347 32.3
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.5e-32 144.4 554 50.5
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 7.4e-32 142.9 556 50.2
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 1.3e-31 142.1 556 48.4
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.7e-31 140.6 347 35.2
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 6.3e-31 139.8 423 30.3
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 8.2e-31 139.4 556 43.9
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 8.2e-31 139.4 558 50.9
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 1.1e-30 139.0 344 36.3
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 2.4e-30 137.9 556 49.1
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 2.4e-30 137.9 554 45.3
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 1.3e-28 132.1 556 47.7
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 2.2e-28 131.3 414 28.3
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 5.0e-28 130.2 555 45.2
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 1.1e-27 129.0 414 38.4
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 9.4e-27 125.9 414 30.0
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 2.1e-26 124.8 200 42.5
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 2.7e-26 124.4 414 28.5
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 2.7e-26 124.4 551 46.8
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 1.8e-25 121.7 555 36.0
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 1.8e-25 121.7 350 32.0
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 8.8e-25 119.4 417 28.8
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 2.0e-24 118.2 554 49.6
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 9.7e-24 115.9 556 42.6
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 1.7e-23 115.2 555 47.4
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 6.3e-23 113.2 559 48.7
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 1.8e-22 111.7 350 29.7
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 2.4e-22 111.3 555 46.1
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 3.1e-22 110.9 554 48.6
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 3.1e-22 110.9 556 48.2
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 5.3e-22 110.2 554 47.3
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 1.2e-21 109.0 557 48.3
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 2.6e-21 107.8 558 45.9
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 3.4e-21 107.5 348 31.3
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 5.9e-21 106.7 562 44.1
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 7.7e-21 106.3 562 41.5
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 2.9e-20 104.4 349 30.1
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 6.5e-20 103.2 348 28.4
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 1.4e-19 102.1 558 45.5
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 1.9e-19 101.7 347 29.1
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 5.5e-19 100.1 350 29.1
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 9.4e-19 99.4 564 36.3
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 2.7e-18 97.8 557 37.3
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 7.9e-18 96.3 131 43.5
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.0e-17 94.4 346 28.0
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 5.1e-17 93.6 559 45.3
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.6e-16 91.3 343 29.7
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 2.6e-16 91.3 432 46.5
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 7.4e-16 89.7 291 44.3
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 9.7e-16 89.4 561 47.2
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.8e-15 87.8 555 44.3
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 2.8e-15 87.8 345 28.7
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 6.3e-15 86.7 407 48.4
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 1.1e-14 85.9 265 29.1
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 1.4e-14 85.5 554 34.8
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 1.8e-14 85.1 190 36.3
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 5.3e-14 83.6 189 35.4
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 2.6e-13 81.3 345 28.4
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 1.7e-12 78.6 152 36.2
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.7e-12 78.6 394 58.1
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 1.1e-11 75.9 564 44.1
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 9.4e-11 72.8 298 57.7
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 9.4e-11 72.8 145 58.6
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 1.2e-10 72.4 119 50.4
COL.COLO4_22633 Corchorus olitorius HOM05D007535 ORTHO05D008520 1.6e-10 72.0 204 32.4
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 8.0e-10 69.7 350 25.7
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 1.4e-09 68.9 101 41.6
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 1.8e-09 68.6 390 47.2
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 4.0e-09 67.4 80 46.2
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 6.7e-09 66.6 264 43.6
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 2.6e-08 64.7 342 27.8
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.7e-07 60.8 99 37.4
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 4.1e-06 57.4 94 38.3
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 5.3e-06 57.0 407 42.0
Thhalv10013516m.g Eutrema salsugineum HOM05D012474 ORTHO05D008520 7.0e-06 56.6 84 40.5


User provided reference genes

Program Settings