Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 1.1e-60 236.5 119 100.0
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 7.9e-48 193.7 117 82.1
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 2.3e-47 192.2 115 82.6
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 8.7e-47 190.3 115 83.5
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 4.3e-46 188.0 115 83.5
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 1.5e-43 179.5 115 77.4
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.6e-43 178.7 115 77.4
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 3.4e-43 178.3 116 79.3
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 9.9e-43 176.8 117 79.5
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 9.9e-43 176.8 115 77.4
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 1.3e-42 176.4 116 80.2
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 4.9e-42 174.5 115 78.3
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 8.4e-42 173.7 118 75.4
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 1.1e-41 173.3 115 75.7
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 3.2e-41 171.8 115 74.8
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 5.4e-41 171.0 115 74.8
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 1.6e-40 169.5 115 78.3
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.7e-40 168.7 115 76.5
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 3.5e-40 168.3 121 73.6
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 3.5e-40 168.3 119 70.6
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 3.5e-40 168.3 120 74.2
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 6.0e-40 167.5 117 75.2
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 6.0e-40 167.5 115 73.9
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 1.3e-39 166.4 117 73.5
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 1.3e-39 166.4 117 73.5
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.8e-39 166.0 122 73.8
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.8e-39 166.0 115 74.8
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 2.3e-39 165.6 117 74.4
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 2.3e-39 165.6 117 73.5
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 3.9e-39 164.9 117 73.5
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 5.1e-39 164.5 115 73.0
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 1.1e-38 163.3 115 75.7
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 3.3e-38 161.8 117 70.9
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 3.3e-38 161.8 120 70.8
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 4.3e-38 161.4 117 71.8
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 4.3e-38 161.4 116 72.4
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 4.3e-38 161.4 115 73.9
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 7.4e-38 160.6 115 73.9
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 7.4e-38 160.6 115 70.4
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 1.3e-37 159.8 117 71.8
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 1.6e-37 159.5 116 71.6
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 2.8e-37 158.7 115 70.4
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 2.8e-37 158.7 114 71.9
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 3.7e-37 158.3 116 69.8
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 4.8e-37 157.9 120 70.8
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 4.8e-37 157.9 120 70.8
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 4.8e-37 157.9 119 69.7
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 4.8e-37 157.9 117 74.4
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 6.2e-37 157.5 115 67.8
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 8.1e-37 157.1 115 67.8
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 1.1e-36 156.8 118 69.5
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 1.1e-36 156.8 115 71.3
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.8e-36 156.0 120 70.8
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.8e-36 156.0 121 71.9
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 1.8e-36 156.0 115 67.8
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 2.4e-36 155.6 114 71.1
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 2.4e-36 155.6 114 71.1
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 2.4e-36 155.6 115 72.2
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 4.0e-36 154.8 115 71.3
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 4.0e-36 154.8 113 72.6
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 4.0e-36 154.8 116 70.7
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 5.3e-36 154.5 121 71.9
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 5.3e-36 154.5 116 70.7
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 6.9e-36 154.1 115 69.6
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 6.9e-36 154.1 115 69.6
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 6.9e-36 154.1 115 69.6
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 6.9e-36 154.1 116 70.7
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 9.0e-36 153.7 115 70.4
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 9.0e-36 153.7 115 69.6
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 1.2e-35 153.3 115 67.8
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 1.5e-35 152.9 116 70.7
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 2.0e-35 152.5 90 81.1
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.6e-35 152.1 116 69.8
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 2.6e-35 152.1 119 69.7
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 3.4e-35 151.8 118 68.6
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 4.5e-35 151.4 119 68.1
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 4.5e-35 151.4 119 68.1
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 4.5e-35 151.4 115 67.8
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 5.8e-35 151.0 116 69.8
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 5.8e-35 151.0 115 69.6
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.0e-34 150.2 119 67.2
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 1.3e-34 149.8 116 68.1
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 1.3e-34 149.8 119 66.4
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.2e-34 149.1 116 68.1
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 2.2e-34 149.1 118 68.6
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 2.9e-34 148.7 119 67.2
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 3.8e-34 148.3 117 65.0
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 3.8e-34 148.3 115 67.8
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 4.9e-34 147.9 142 58.5
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 4.9e-34 147.9 85 83.5
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 4.9e-34 147.9 120 66.7
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 8.4e-34 147.1 121 66.9
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 8.4e-34 147.1 119 63.9
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 1.1e-33 146.7 116 65.5
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 1.4e-33 146.4 119 66.4
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.4e-33 146.4 109 68.8
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.4e-33 146.4 117 67.5
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.9e-33 146.0 117 66.7
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 2.5e-33 145.6 117 67.5
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.5e-33 145.6 117 67.5
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 3.5e-32 141.7 84 77.4
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 3.5e-32 141.7 114 66.7
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 7.9e-32 140.6 117 62.4
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 1.8e-31 139.4 116 68.1
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.5e-30 136.3 113 63.7
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 1.9e-30 136.0 109 67.0
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.9e-30 136.0 117 63.2
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 7.4e-30 134.0 113 63.7
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 6.2e-29 131.0 86 74.4
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 1.1e-28 130.2 84 73.8
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.1e-28 130.2 115 63.5
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 3.4e-27 125.2 114 63.2
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 4.5e-27 124.8 87 72.4
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 8.4e-26 120.6 116 56.0
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 8.4e-26 120.6 91 62.6
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 4.6e-24 114.8 114 56.1
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.0e-23 113.6 110 59.1
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.3e-23 112.5 114 57.9
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 3.0e-23 112.1 66 75.8
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 5.1e-23 111.3 56 89.3
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 5.7e-22 107.8 110 57.3
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 2.4e-20 102.4 60 80.0
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 3.1e-20 102.1 94 57.4
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.5e-19 99.8 54 83.3
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 7.9e-16 87.4 88 53.4
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 2.0e-14 82.8 73 61.6
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 7.4e-14 80.9 83 60.2
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 2.2e-13 79.3 74 60.8
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.0e-11 72.8 75 62.7
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 7.7e-11 70.9 58 60.3
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 2.1e-08 62.8 105 41.9
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 3.6e-08 62.0 114 40.4
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 2.3e-07 59.3 84 47.6


User provided reference genes

Program Settings