Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p011630 Quercus lobata HOM05D021165 ORTHO05D006261 2.2e-82 308.9 157 100.0
QL01p011372 Quercus lobata HOM05D021165 ORTHO05D006261 1.6e-80 302.8 157 98.1
Haze_23331 Corylus avellana HOM05D021165 ORTHO05D006261 5.9e-35 151.4 155 53.5
CiPaw.13G131800 Carya illinoinensis HOM05D006872 ORTHO05D006261 2.0e-27 126.3 139 54.7
Thecc.09G276100 Theobroma cacao HOM05D006872 ORTHO05D006261 5.9e-19 98.2 146 39.7
Ciclev10029945m.g Citrus clementina HOM05D021165 ORTHO05D006261 3.0e-15 85.9 103 42.7
Cfa009970 Carpinus fangiana HOM05D021165 ORTHO05D006261 4.0e-15 85.5 119 44.5
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 5.7e-14 81.6 139 42.4
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 3.7e-13 79.0 140 42.1
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 4.9e-13 78.6 138 41.3
Prupe.6G139500 Prunus persica HOM05D021165 ORTHO05D006261 1.8e-12 76.6 138 40.6
Sabra04G0135800 Salix brachista HOM05D065446 ORTHO05D050541 4.1e-12 75.5 148 36.5
Potri.006G205200 Populus trichocarpa HOM05D006872 ORTHO05D006261 9.2e-12 74.3 113 44.2
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 1.7e-10 70.1 136 36.8
Sabra06G0158200 Salix brachista HOM05D006872 ORTHO05D006261 1.7e-10 70.1 113 43.4
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 3.8e-10 68.9 140 38.6
MBI17_g00990_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 6.6e-10 68.2 136 36.8
Potri.016G072500 Populus trichocarpa HOM05D006872 ORTHO05D006261 8.6e-10 67.8 108 42.6
ClCG10G018510 Citrullus lanatus HOM05D006872 ORTHO05D006261 1.9e-09 66.6 112 38.4
Manes.08G031500 Manihot esculenta HOM05D006872 ORTHO05D006261 1.9e-09 66.6 105 42.9
Sabra16G0075400 Salix brachista HOM05D006872 ORTHO05D006261 1.2e-08 63.9 109 42.2
Manes.09G048400 Manihot esculenta HOM05D006872 ORTHO05D006261 1.6e-08 63.5 105 39.0
PGR004G0970 Punica granatum HOM05D006872 ORTHO05D006261 2.1e-08 63.2 107 38.3
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 4.7e-08 62.0 152 36.2
MELO3C009518.2 Cucumis melo HOM05D006872 ORTHO05D006261 6.1e-08 61.6 113 36.3
PSO339G3041 Papaver somniferum HOM05D006872 ORTHO05D006261 6.1e-08 61.6 115 35.7
CsaV3_3G037750 Cucumis sativus L. HOM05D006872 ORTHO05D006261 8.0e-08 61.2 113 37.2
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 1.0e-07 60.8 105 37.1
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 1.4e-07 60.5 104 41.3
PSO384G3916 Papaver somniferum HOM05D006872 ORTHO05D006261 1.4e-07 60.5 112 36.6
CiPaw.09G018900 Carya illinoinensis HOM05D006872 ORTHO05D006261 1.8e-07 60.1 132 36.4
Sed0000741 Sechium edule HOM05D006872 ORTHO05D006261 1.8e-07 60.1 108 34.3
CsaV3_6G040990 Cucumis sativus L. HOM05D006872 ORTHO05D006261 6.8e-07 58.2 113 35.4
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 6.8e-07 58.2 106 40.6
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 1.2e-06 57.4 103 39.8
CANSAT64G1977 Cannabis sativa HOM05D006872 ORTHO05D006261 1.5e-06 57.0 150 34.7
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 1.5e-06 57.0 105 36.2
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 1.5e-06 57.0 105 36.2
Sed0018559 Sechium edule HOM05D006872 ORTHO05D006261 2.0e-06 56.6 102 39.2
CiPaw.10G015400 Carya illinoinensis HOM05D006872 ORTHO05D006261 4.4e-06 55.5 134 38.1
MELO3C024577.2 Cucumis melo HOM05D006872 ORTHO05D006261 4.4e-06 55.5 113 36.3
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 5.8e-06 55.1 137 33.6
Rhsim04G0129900 Rhododendron simsii HOM05D006872 ORTHO05D006261 5.8e-06 55.1 103 35.9
Sed0014477 Sechium edule HOM05D006872 ORTHO05D006261 5.8e-06 55.1 106 35.8
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 5.8e-06 55.1 113 37.2
Lsat_1_v5_gn_6_35120 Lactuca sativa HOM05D006872 ORTHO05D006261 7.5e-06 54.7 103 37.9
Lalb_Chr20g0111461 Lupinus albus HOM05D006872 ORTHO05D006261 7.5e-06 54.7 115 34.8


User provided reference genes

Program Settings