Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p011372 Quercus lobata HOM05D021165 ORTHO05D006261 6.4e-82 307.4 157 100.0
QL01p011630 Quercus lobata HOM05D021165 ORTHO05D006261 2.1e-80 302.4 157 98.1
Haze_23331 Corylus avellana HOM05D021165 ORTHO05D006261 2.9e-34 149.1 155 52.9
CiPaw.13G131800 Carya illinoinensis HOM05D006872 ORTHO05D006261 7.7e-27 124.4 139 54.0
Thecc.09G276100 Theobroma cacao HOM05D006872 ORTHO05D006261 8.6e-18 94.4 146 38.4
Ciclev10029945m.g Citrus clementina HOM05D021165 ORTHO05D006261 3.0e-15 85.9 103 42.7
Cfa009970 Carpinus fangiana HOM05D021165 ORTHO05D006261 1.5e-14 83.6 119 43.7
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 2.2e-13 79.7 139 41.7
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 1.4e-12 77.0 138 41.3
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.4e-12 77.0 140 41.4
Prupe.6G139500 Prunus persica HOM05D021165 ORTHO05D006261 5.4e-12 75.1 138 39.9
Sabra04G0135800 Salix brachista HOM05D065446 ORTHO05D050541 5.4e-12 75.1 148 36.5
Potri.006G205200 Populus trichocarpa HOM05D006872 ORTHO05D006261 9.2e-12 74.3 113 44.2
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 1.3e-10 70.5 136 37.5
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 3.8e-10 68.9 140 38.6
Sabra06G0158200 Salix brachista HOM05D006872 ORTHO05D006261 6.6e-10 68.2 134 40.3
MBI17_g00990_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 8.6e-10 67.8 136 36.8
Potri.016G072500 Populus trichocarpa HOM05D006872 ORTHO05D006261 1.1e-09 67.4 108 42.6
ClCG10G018510 Citrullus lanatus HOM05D006872 ORTHO05D006261 1.9e-09 66.6 112 38.4
Manes.08G031500 Manihot esculenta HOM05D006872 ORTHO05D006261 1.9e-09 66.6 105 42.9
Sabra16G0075400 Salix brachista HOM05D006872 ORTHO05D006261 1.2e-08 63.9 109 42.2
Manes.09G048400 Manihot esculenta HOM05D006872 ORTHO05D006261 1.6e-08 63.5 105 39.0
PGR004G0970 Punica granatum HOM05D006872 ORTHO05D006261 2.8e-08 62.8 107 38.3
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 4.7e-08 62.0 152 36.2
MELO3C009518.2 Cucumis melo HOM05D006872 ORTHO05D006261 6.1e-08 61.6 113 36.3
PSO339G3041 Papaver somniferum HOM05D006872 ORTHO05D006261 6.1e-08 61.6 115 35.7
CsaV3_3G037750 Cucumis sativus L. HOM05D006872 ORTHO05D006261 8.0e-08 61.2 113 37.2
MBI01_g17601_MAGBIO Magnolia biondii HOM05D006872 ORTHO05D006261 1.4e-07 60.5 104 41.3
PSO384G3916 Papaver somniferum HOM05D006872 ORTHO05D006261 1.4e-07 60.5 112 36.6
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 1.4e-07 60.5 105 37.1
Sed0000741 Sechium edule HOM05D006872 ORTHO05D006261 2.3e-07 59.7 108 34.3
CiPaw.09G018900 Carya illinoinensis HOM05D006872 ORTHO05D006261 4.0e-07 58.9 140 36.4
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 6.8e-07 58.2 106 40.6
CsaV3_6G040990 Cucumis sativus L. HOM05D006872 ORTHO05D006261 8.9e-07 57.8 113 35.4
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 1.2e-06 57.4 103 39.8
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 2.0e-06 56.6 105 36.2
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 2.0e-06 56.6 105 36.2
Sed0018559 Sechium edule HOM05D006872 ORTHO05D006261 2.6e-06 56.2 102 39.2
CANSAT64G1977 Cannabis sativa HOM05D006872 ORTHO05D006261 4.4e-06 55.5 147 34.7
MELO3C024577.2 Cucumis melo HOM05D006872 ORTHO05D006261 5.8e-06 55.1 113 36.3
Rhsim04G0129900 Rhododendron simsii HOM05D006872 ORTHO05D006261 5.8e-06 55.1 103 35.9
Sed0014477 Sechium edule HOM05D006872 ORTHO05D006261 5.8e-06 55.1 106 35.8
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 5.8e-06 55.1 113 37.2
Lsat_1_v5_gn_6_35120 Lactuca sativa HOM05D006872 ORTHO05D006261 7.5e-06 54.7 103 37.9
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 7.5e-06 54.7 137 33.6
CiPaw.10G015400 Carya illinoinensis HOM05D006872 ORTHO05D006261 9.8e-06 54.3 141 36.9
Lalb_Chr20g0111461 Lupinus albus HOM05D006872 ORTHO05D006261 9.8e-06 54.3 115 34.8


User provided reference genes

Program Settings