Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p011344 Quercus lobata HOM05D003975 ORTHO05D009899 4.5e-51 204.1 93 100.0
Thecc.09G275700 Theobroma cacao HOM05D003975 ORTHO05D009899 9.8e-38 159.8 78 87.2
Haze_23328 Corylus avellana HOM05D003975 ORTHO05D009899 3.7e-37 157.9 78 89.7
Thecc.09G155000 Theobroma cacao HOM05D003975 ORTHO05D009899 3.7e-37 157.9 79 86.1
GSVIVG01036058001 Vitis vinifera HOM05D003975 ORTHO05D009899 8.3e-37 156.8 87 79.3
Cfa009967 Carpinus fangiana HOM05D003975 ORTHO05D009899 2.4e-36 155.2 78 87.2
Gorai.001G124000 Gossypium raimondii HOM05D003975 ORTHO05D009899 2.4e-36 155.2 78 83.3
Gohir.D07G115700 Gossypium hirsutum HOM05D003975 ORTHO05D009899 7.0e-36 153.7 78 82.1
Atru.chr3.3141 Acer truncatum HOM05D003975 ORTHO05D009899 2.0e-35 152.1 88 79.5
Hma1.2p1_0793F.1_g218650 Hydrangea macrophylla HOM05D003975 ORTHO05D009899 6.0e-35 150.6 78 85.9
Dinv08130 Davidia involucrata HOM05D003975 ORTHO05D009899 7.8e-35 150.2 80 83.8
Gohir.A07G112200 Gossypium hirsutum HOM05D003975 ORTHO05D009899 7.8e-35 150.2 78 80.8
Duzib150G1666 Durio zibethinus HOM05D003975 ORTHO05D009899 1.0e-34 149.8 78 80.8
Eucgr.J00540 Eucalyptus grandis HOM05D003975 ORTHO05D009899 1.7e-34 149.1 78 84.6
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.7e-34 149.1 79 86.1
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 2.3e-34 148.7 79 86.1
RcHm_v2.0_Chr5g0047291 Rosa chinensis HOM05D003975 ORTHO05D009899 2.3e-34 148.7 78 85.9
MD03G1152900 Malus domestica HOM05D003975 ORTHO05D009899 3.9e-34 147.9 79 84.8
ClCG02G022390 Citrullus lanatus HOM05D003975 ORTHO05D009899 5.0e-34 147.5 80 80.0
Sed0002680 Sechium edule HOM05D003975 ORTHO05D009899 1.5e-33 146.0 79 82.3
PSO339G0200 Papaver somniferum HOM05D003975 ORTHO05D009899 2.5e-33 145.2 80 78.8
PSO384G0061 Papaver somniferum HOM05D003975 ORTHO05D009899 2.5e-33 145.2 80 78.8
SalBow6G3564 Salvia bowleyana HOM05D003975 ORTHO05D009899 7.3e-33 143.7 81 70.4
CSS0027551 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009899 1.2e-32 142.9 78 79.5
Migut.D02414 Erythranthe guttata HOM05D003975 ORTHO05D009899 1.6e-32 142.5 80 72.5
Solyc11g068810.2 Solanum lycopersicum HOM05D003975 ORTHO05D009899 1.6e-32 142.5 78 78.2
Sopen11g027530 Solanum pennellii HOM05D003975 ORTHO05D009899 1.6e-32 142.5 78 78.2
TAR633G2299 Trochodendron aralioides HOM05D003975 ORTHO05D009899 2.1e-32 142.1 71 87.3
Prupe.6G140000 Prunus persica HOM05D003975 ORTHO05D009899 3.6e-32 141.4 78 82.1
MBI01_g04527_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 6.2e-32 140.6 78 75.6
Potri.009G162200 Populus trichocarpa HOM05D003975 ORTHO05D009899 6.2e-32 140.6 86 74.4
CANSAT54G1521 Cannabis sativa HOM05D003975 ORTHO05D009899 1.4e-31 139.4 77 77.9
PGSC0003DMG400019630 Solanum tuberosum HOM05D003975 ORTHO05D009899 1.4e-31 139.4 78 76.9
Potri.004G201000 Populus trichocarpa HOM05D003975 ORTHO05D009899 3.1e-31 138.3 86 72.1
Cc01_g08600 Coffea canephora HOM05D003975 ORTHO05D009899 4.0e-31 137.9 80 72.5
Aqoxy4G02677 Aquilegia oxysepala HOM05D003975 ORTHO05D009899 6.8e-31 137.1 84 71.4
COL.COLO4_22656 Corchorus olitorius HOM05D003975 ORTHO05D009899 6.8e-31 137.1 85 71.8
MELO3C014515.2 Cucumis melo HOM05D003975 ORTHO05D009899 6.8e-31 137.1 78 76.9
Nitab4.5_0000893g0020 Nicotiana tabacum HOM05D003975 ORTHO05D009899 1.2e-30 136.3 78 75.6
Nitab4.5_0001135g0190 Nicotiana tabacum HOM05D003975 ORTHO05D009899 2.6e-30 135.2 78 74.4
TWI31G0968 Tripterygium wilfordii HOM05D003975 ORTHO05D009899 2.6e-30 135.2 77 76.6
CAN.G745.37 Capsicum annuum HOM05D003975 ORTHO05D009899 5.8e-30 134.0 78 73.1
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 7.5e-30 133.7 86 69.8
Lsat_1_v5_gn_2_56181 Lactuca sativa HOM05D000240 ORTHO05D001153 9.8e-30 133.3 85 63.5
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 1.3e-29 132.9 86 68.6
Sabra15G0031600 Salix brachista HOM05D003975 ORTHO05D009899 1.3e-29 132.9 86 69.8
Sabra15G0048400 Salix brachista HOM05D003975 ORTHO05D009899 1.3e-29 132.9 86 69.8
Sabra15G0060100 Salix brachista HOM05D003975 ORTHO05D009899 1.3e-29 132.9 86 69.8
HanXRQChr09g0248811 Helianthus annuus HOM05D003975 ORTHO05D009899 1.7e-29 132.5 77 72.7
CAN.G745.38 Capsicum annuum HOM05D003975 ORTHO05D009899 2.2e-29 132.1 78 71.8
Nn6g34748 Nelumbo nucifera HOM05D003975 ORTHO05D009899 2.2e-29 132.1 80 72.5
Sabra15G0053200 Salix brachista HOM05D003975 ORTHO05D009899 3.7e-29 131.3 87 67.8
DCAR_013070 Daucus carota HOM05D003975 ORTHO05D009899 4.9e-29 131.0 79 72.2
ATR0772G086 Amborella trichopoda HOM05D003975 ORTHO05D009899 6.4e-29 130.6 82 67.1
Sabra15G0046300 Salix brachista HOM05D003975 ORTHO05D009899 6.4e-29 130.6 85 69.4
Sabra15G0052000 Salix brachista HOM05D003975 ORTHO05D009899 6.4e-29 130.6 85 69.4
Sabra15G0053900 Salix brachista HOM05D003975 ORTHO05D009899 6.4e-29 130.6 85 69.4
Ciclev10029713m.g Citrus clementina HOM05D003975 ORTHO05D009899 8.3e-29 130.2 82 75.6
CsaV3_6G038520 Cucumis sativus L. HOM05D003975 ORTHO05D009899 1.1e-28 129.8 74 77.0
Lalb_Chr09g0335081 Lupinus albus HOM05D003975 ORTHO05D009899 1.4e-28 129.4 78 71.8
Peaxi162Scf00224g00092 Petunia axillaris HOM05D003975 ORTHO05D009899 4.1e-28 127.9 69 75.4
THA.LOC104799562 Tarenaya hassleriana HOM05D003975 ORTHO05D009899 1.2e-27 126.3 80 70.0
ECA238G1997 Erigeron canadensis HOM05D003975 ORTHO05D009899 2.7e-27 125.2 77 68.8
AUR62011465 Chenopodium quinoa HOM05D003975 ORTHO05D009899 4.6e-27 124.4 78 65.4
unitig_0.g1469 Utricularia gibba HOM05D003975 ORTHO05D009899 6.0e-27 124.0 78 66.7
Glyma.08G290000 Glycine max HOM05D003975 ORTHO05D009899 7.8e-27 123.6 77 67.5
arahy.Tifrunner.gnm1.ann1.QQFJ2J Arachis hypogaea HOM05D003975 ORTHO05D009899 2.3e-26 122.1 78 67.9
arahy.Tifrunner.gnm1.ann1.V52YDZ Arachis hypogaea HOM05D003975 ORTHO05D009899 2.3e-26 122.1 78 67.9
Phvul.003G054000 Phaseolus vulgaris HOM05D003975 ORTHO05D009899 2.3e-26 122.1 77 64.9
EL10Ac9g21860 Beta vulgaris HOM05D003975 ORTHO05D009899 1.1e-25 119.8 78 65.4
A10p18580 Brassica napus HOM05D003975 ORTHO05D009899 1.1e-25 119.8 80 67.5
Glyma.18G134500 Glycine max HOM05D003975 ORTHO05D009899 1.1e-25 119.8 77 64.9
Ah.01g020290 Amaranthus hybridus HOM05D003975 ORTHO05D009899 1.5e-25 119.4 79 64.6
BcaC04g19558 Brassica carinata HOM05D003975 ORTHO05D009899 2.5e-25 118.6 80 66.2
C09p54430 Brassica napus HOM05D003975 ORTHO05D009899 2.5e-25 118.6 80 66.2
BolC9t58312H Brassica oleracea HOM05D003975 ORTHO05D009899 2.5e-25 118.6 80 66.2
AUR62016590 Chenopodium quinoa HOM05D003975 ORTHO05D009899 3.3e-25 118.2 78 62.8
CARHR191340 Cardamine hirsuta HOM05D003975 ORTHO05D009899 4.3e-25 117.9 80 67.5
Sc03g0003650 Simmondsia chinensis HOM05D003975 ORTHO05D009899 4.3e-25 117.9 77 67.5
Sp6g23020 Schrenkiella parvula HOM05D003975 ORTHO05D009899 5.6e-25 117.5 80 67.5
AL6G33210 Arabidopsis lyrata HOM05D003975 ORTHO05D009899 7.3e-25 117.1 80 67.5
HPP92_009773 Vanilla planifolia HOM05D000917 ORTHO05D009899 7.3e-25 117.1 80 58.8
AT5G22210 Arabidopsis thaliana HOM05D003975 ORTHO05D009899 9.5e-25 116.7 80 66.2
BraA10t43938Z Brassica rapa HOM05D003975 ORTHO05D009899 9.5e-25 116.7 80 66.2
TAR268G0001 Trochodendron aralioides HOM05D001423 ORTHO05D001412 6.2e-24 114.0 72 76.4
HPP92_009742 Vanilla planifolia HOM05D000917 ORTHO05D000764 6.2e-24 114.0 80 57.5
BcaB08g36448 Brassica carinata HOM05D003975 ORTHO05D009899 1.1e-23 113.2 80 65.0
Carub.0006s1995 Capsella rubella HOM05D003975 ORTHO05D009899 1.4e-23 112.8 80 65.0
MBI04_g20761_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 3.3e-09 65.1 47 57.4
SEGI_31848 Sequoiadendron giganteum HOM05D003975 ORTHO05D009899 1.5e-06 56.2 40 55.0
MBI18_g28520_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 2.6e-06 55.5 36 61.1


User provided reference genes

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