Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p011158 Quercus lobata HOM05D008514 ORTHO05D010490 2.1e-61 238.8 118 100.0
Haze_23309 Corylus avellana HOM05D008514 ORTHO05D010490 6.4e-26 120.9 79 72.2
CiPaw.14G094900 Carya illinoinensis HOM05D008514 ORTHO05D010490 7.8e-24 114.0 85 64.7
CiPaw.13G130800 Carya illinoinensis HOM05D008514 ORTHO05D010490 1.1e-22 110.2 97 58.8
QL01p020143 Quercus lobata HOM05D008514 ORTHO05D010490 2.5e-22 109.0 100 56.0
Cfa009942 Carpinus fangiana HOM05D008514 ORTHO05D010490 9.0e-20 100.5 75 66.7
Dinv17092 Davidia involucrata HOM05D002527 ORTHO05D002865 2.8e-13 79.0 91 46.2
Lalb_Chr24g0393401 Lupinus albus HOM05D008514 ORTHO05D010490 3.1e-12 75.5 79 46.8
Thecc.09G274000 Theobroma cacao HOM05D008514 ORTHO05D010490 4.0e-12 75.1 81 53.1
Duzib170G0491 Durio zibethinus HOM05D008514 ORTHO05D010490 6.9e-12 74.3 80 52.5
TAR623G0293 Trochodendron aralioides HOM05D008514 ORTHO05D010490 1.2e-11 73.6 79 49.4
Phvul.005G120600 Phaseolus vulgaris HOM05D008514 ORTHO05D010490 2.6e-11 72.4 78 46.2
Glyma.12G187800 Glycine max HOM05D008514 ORTHO05D010490 4.5e-11 71.6 79 46.8
Gohir.A09G098550 Gossypium hirsutum HOM05D008514 ORTHO05D010490 4.5e-11 71.6 82 52.4
Gohir.D09G097950 Gossypium hirsutum HOM05D008514 ORTHO05D010490 4.5e-11 71.6 81 50.6
Gorai.006G114900 Gossypium raimondii HOM05D008514 ORTHO05D010490 4.5e-11 71.6 81 50.6
Nn2g14299 Nelumbo nucifera HOM05D008514 ORTHO05D010490 1.7e-10 69.7 86 45.3
Nn6g34697 Nelumbo nucifera HOM05D008514 ORTHO05D010490 2.2e-10 69.3 78 47.4
VMungo1080G0611 Vigna mungo HOM05D008514 ORTHO05D010490 2.9e-10 68.9 78 46.2
Actinidia37064 Actinidia chinensis HOM05D008514 ORTHO05D010490 6.4e-10 67.8 83 47.0
Glyma.13G313400 Glycine max HOM05D008514 ORTHO05D010490 6.4e-10 67.8 79 44.3
TAR633G2191 Trochodendron aralioides HOM05D008514 ORTHO05D010490 8.4e-10 67.4 79 44.3
Actinidia35477 Actinidia chinensis HOM05D008514 ORTHO05D010490 1.4e-09 66.6 84 50.0
Prupe.6G143500 Prunus persica HOM05D008514 ORTHO05D010490 1.4e-09 66.6 86 48.8
arahy.Tifrunner.gnm1.ann1.14V2F6 Arachis hypogaea HOM05D008514 ORTHO05D010490 3.2e-09 65.5 110 40.0
Lj3g0020405 Lotus japonicus HOM05D008514 ORTHO05D010490 5.5e-09 64.7 96 44.8
arahy.Tifrunner.gnm1.ann1.UQY7KW Arachis hypogaea HOM05D008514 ORTHO05D010490 7.1e-09 64.3 83 45.8
Potri.001G217500 Populus trichocarpa HOM05D008514 ORTHO05D010490 1.2e-08 63.5 109 39.4
FAN09G3467 Fragaria x ananassa HOM05D022265 ORTHO05D010490 2.7e-08 62.4 79 45.6
Manes.11G165600 Manihot esculenta HOM05D008514 ORTHO05D010490 2.7e-08 62.4 82 43.9
TPR.G4224 Trifolium pratense HOM05D008514 ORTHO05D010490 3.5e-08 62.0 97 44.3
FvH4_6g16343 Fragaria vesca HOM05D022265 ORTHO05D010490 4.6e-08 61.6 79 45.6
Psat5g260000 Pisum sativum HOM05D008514 ORTHO05D010490 6.0e-08 61.2 80 42.5
Hma1.2p1_0101F.1_g049390 Hydrangea macrophylla HOM05D008514 ORTHO05D010490 1.0e-07 60.5 43 62.8
Potri.009G020300 Populus trichocarpa HOM05D008514 ORTHO05D010490 1.3e-07 60.1 108 41.7
Sabra16G0126400 Salix brachista HOM05D008514 ORTHO05D010490 1.3e-07 60.1 114 39.5
Nitab4.5_0003419g0020 Nicotiana tabacum HOM05D008514 ORTHO05D010490 8.7e-07 57.4 74 43.2
Psat5g259960 Pisum sativum HOM05D008514 ORTHO05D010490 8.7e-07 57.4 80 41.2
COL.COLO4_10193 Corchorus olitorius HOM05D008514 ORTHO05D010490 1.9e-06 56.2 87 42.5
Sabra09G0012000 Salix brachista HOM05D008514 ORTHO05D010490 3.3e-06 55.5 107 38.3


User provided reference genes

Program Settings