Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL01p010206 Quercus lobata HOM05D002613 ORTHO05D337184 1.2e-89 333.2 173 100.0
QL01p010147 Quercus lobata HOM05D002613 ORTHO05D003140 7.7e-44 181.0 130 75.4
CiPaw.13G171200 Carya illinoinensis HOM05D002613 ORTHO05D003140 1.6e-33 146.7 131 63.4
Haze_22997 Corylus avellana HOM05D002613 ORTHO05D003140 6.1e-33 144.8 130 63.8
Hma1.2p1_0972F.1_g242880 Hydrangea macrophylla HOM05D002613 ORTHO05D003140 1.5e-31 140.2 128 62.5
Cfa009628 Carpinus fangiana HOM05D002613 ORTHO05D003140 7.4e-31 137.9 130 60.0
Thecc.01G283400 Theobroma cacao HOM05D002613 ORTHO05D003140 2.2e-30 136.3 127 59.1
Atru.chr3.2189 Acer truncatum HOM05D002613 ORTHO05D003140 2.8e-30 136.0 131 56.5
TWI34G1355 Tripterygium wilfordii HOM05D002613 ORTHO05D003140 4.8e-30 135.2 125 58.4
TAR626G0637 Trochodendron aralioides HOM05D002613 ORTHO05D003140 8.2e-30 134.4 131 55.0
GSVIVG01025382001 Vitis vinifera HOM05D002613 ORTHO05D003140 8.2e-30 134.4 122 58.2
Eucgr.B02614 Eucalyptus grandis HOM05D002613 ORTHO05D003140 1.1e-29 134.0 133 57.9
MD03G1012100 Malus domestica HOM05D002613 ORTHO05D003140 2.4e-29 132.9 124 58.9
Prupe.6G012300 Prunus persica HOM05D002613 ORTHO05D003140 2.4e-29 132.9 124 60.5
Ciclev10014661m.g Citrus clementina HOM05D002613 ORTHO05D003140 3.1e-29 132.5 142 54.2
HanXRQChr01g0021171 Helianthus annuus HOM05D002613 ORTHO05D003140 7.0e-29 131.3 129 52.7
MD11G1014800 Malus domestica HOM05D002613 ORTHO05D003140 7.0e-29 131.3 125 57.6
PGR119G0585 Punica granatum HOM05D002613 ORTHO05D003140 9.1e-29 131.0 131 58.0
Potri.001G010400 Populus trichocarpa HOM05D002613 ORTHO05D003140 1.2e-28 130.6 127 56.7
Manes.03G089300 Manihot esculenta HOM05D002613 ORTHO05D003140 2.6e-28 129.4 124 58.1
Sabra01G0008200 Salix brachista HOM05D002613 ORTHO05D003140 2.6e-28 129.4 127 57.5
TPR.G32322 Trifolium pratense HOM05D002613 ORTHO05D003140 3.5e-28 129.0 135 56.3
CsaV3_4G023560 Cucumis sativus L. HOM05D002613 ORTHO05D003140 4.5e-28 128.6 127 54.3
Nn5g27657 Nelumbo nucifera HOM05D002613 ORTHO05D003140 4.5e-28 128.6 129 55.0
CSS0038007 Camellia sinensis var. sinensis HOM05D002613 ORTHO05D003140 5.9e-28 128.3 124 58.1
Cc01_g00960 Coffea canephora HOM05D002613 ORTHO05D003140 5.9e-28 128.3 128 53.9
COL.COLO4_36417 Corchorus olitorius HOM05D002613 ORTHO05D003140 7.7e-28 127.9 127 55.1
arahy.Tifrunner.gnm1.ann1.QWKW36 Arachis hypogaea HOM05D002613 ORTHO05D003140 1.0e-27 127.5 125 55.2
Actinidia39365 Actinidia chinensis HOM05D002613 ORTHO05D003140 1.3e-27 127.1 126 57.1
ClCG02G023810 Citrullus lanatus HOM05D002613 ORTHO05D003140 1.3e-27 127.1 128 54.7
arahy.Tifrunner.gnm1.ann1.64XXL3 Arachis hypogaea HOM05D002613 ORTHO05D003140 2.9e-27 125.9 125 54.4
Cpa.g.sc119.93 Carica papaya HOM05D002613 ORTHO05D003140 2.9e-27 125.9 126 55.6
Medtr4g074870 Medicago truncatula HOM05D002613 ORTHO05D003140 2.9e-27 125.9 132 53.0
MBI01_g09941_MAGBIO Magnolia biondii HOM05D002613 ORTHO05D003140 3.8e-27 125.6 133 53.4
Nitab4.5_0005477g0010 Nicotiana tabacum HOM05D002613 ORTHO05D003140 5.0e-27 125.2 129 53.5
RcHm_v2.0_Chr5g0081231 Rosa chinensis HOM05D002613 ORTHO05D003140 5.0e-27 125.2 119 57.1
Ca_19031_v3 Cicer arietinum L. HOM05D002613 ORTHO05D003140 6.5e-27 124.8 134 56.0
Duzib133G0550 Durio zibethinus HOM05D002613 ORTHO05D003140 6.5e-27 124.8 125 54.4
FAN11G0610 Fragaria x ananassa HOM05D002613 ORTHO05D003140 6.5e-27 124.8 119 58.0
Actinidia06299 Actinidia chinensis HOM05D002613 ORTHO05D003140 1.1e-26 124.0 126 56.3
TPR.G4363 Trifolium pratense HOM05D002613 ORTHO05D003140 1.1e-26 124.0 135 54.8
Sopen01g002190 Solanum pennellii HOM05D002613 ORTHO05D003140 1.9e-26 123.2 126 54.0
Solyc01g006180.4 Solanum lycopersicum HOM05D002613 ORTHO05D003140 3.2e-26 122.5 126 53.2
Lj2A687G20 Lonicera japonica HOM05D002613 ORTHO05D003140 4.2e-26 122.1 125 56.0
Lsat_1_v5_gn_1_68301 Lactuca sativa HOM05D002613 ORTHO05D003140 5.5e-26 121.7 108 58.3
Lj3g0010476 Lotus japonicus HOM05D002613 ORTHO05D003140 5.5e-26 121.7 124 54.8
MELO3C014660.2 Cucumis melo HOM05D002613 ORTHO05D003140 7.2e-26 121.3 125 52.0
FAN21G1366 Fragaria x ananassa HOM05D002613 ORTHO05D003140 9.4e-26 120.9 119 57.1
Peaxi162Scf00441g00056 Petunia axillaris HOM05D002613 ORTHO05D003140 9.4e-26 120.9 126 53.2
PGSC0003DMG400032193 Solanum tuberosum HOM05D002613 ORTHO05D003140 9.4e-26 120.9 125 53.6
Aqoxy7G01203 Aquilegia oxysepala HOM05D002613 ORTHO05D003140 1.2e-25 120.6 132 49.2
ECA248G0452 Erigeron canadensis HOM05D002613 ORTHO05D003140 1.2e-25 120.6 123 50.4
FvH4_3g44540 Fragaria vesca HOM05D002613 ORTHO05D003140 1.6e-25 120.2 118 55.1
FAN16G0803 Fragaria x ananassa HOM05D002613 ORTHO05D003140 1.6e-25 120.2 118 55.1
Lalb_Chr01g0001471 Lupinus albus HOM05D002613 ORTHO05D003140 1.6e-25 120.2 130 52.3
Nitab4.5_0001568g0020 Nicotiana tabacum HOM05D002613 ORTHO05D003140 1.6e-25 120.2 126 51.6
ECA246G0761 Erigeron canadensis HOM05D002613 ORTHO05D003140 2.1e-25 119.8 123 50.4
Rhsim01G0186200 Rhododendron simsii HOM05D002613 ORTHO05D003140 2.1e-25 119.8 129 51.2
FAN25G0100 Fragaria x ananassa HOM05D002613 ORTHO05D003140 4.7e-25 118.6 119 56.3
Phvul.011G030900 Phaseolus vulgaris HOM05D002613 ORTHO05D003140 6.1e-25 118.2 140 52.1
Sed0009746 Sechium edule HOM05D002613 ORTHO05D003140 1.0e-24 117.5 127 51.2
Aa31LG9G14560 Aethionema arabicum HOM05D002613 ORTHO05D003140 1.4e-24 117.1 144 45.1
Gorai.007G134900 Gossypium raimondii HOM05D002613 ORTHO05D003140 1.8e-24 116.7 124 50.8
Oeu023942.3 Olea europaea HOM05D002613 ORTHO05D003140 1.8e-24 116.7 144 47.9
PSO478G3133 Papaver somniferum HOM05D002613 ORTHO05D003140 4.0e-24 115.5 129 49.6
VMungo1080G0556 Vigna mungo HOM05D002613 ORTHO05D003140 4.0e-24 115.5 126 56.3
Gohir.A11G121100 Gossypium hirsutum HOM05D002613 ORTHO05D003140 8.8e-24 114.4 124 50.8
Carub.0006s2943 Capsella rubella HOM05D002613 ORTHO05D003140 1.5e-23 113.6 120 50.0
COL.COLO4_09136 Corchorus olitorius HOM05D002613 ORTHO05D003140 1.5e-23 113.6 106 56.6
SGA_v2.0_scaffold3G01651 Striga asiatica HOM05D002613 ORTHO05D003140 1.5e-23 113.6 113 53.1
A09p28590 Brassica napus HOM05D002613 ORTHO05D003140 2.6e-23 112.8 122 50.8
PSO782G3240 Papaver somniferum HOM05D002613 ORTHO05D003140 2.6e-23 112.8 128 49.2
BcaB01g01493 Brassica carinata HOM05D002613 ORTHO05D003140 3.3e-23 112.5 120 50.0
Gohir.D11G126200 Gossypium hirsutum HOM05D002613 ORTHO05D003140 3.3e-23 112.5 124 50.0
CARHR255950 Cardamine hirsuta HOM05D002613 ORTHO05D003140 4.4e-23 112.1 120 49.2
AT4G10620 Arabidopsis thaliana HOM05D002613 ORTHO05D003140 9.7e-23 110.9 118 48.3
Sp6g06830 Schrenkiella parvula HOM05D002613 ORTHO05D003140 9.7e-23 110.9 125 48.8
BraA09t38420Z Brassica rapa HOM05D002613 ORTHO05D003140 2.2e-22 109.8 122 50.0
MSTRG.20954 Avicennia marina HOM05D002613 ORTHO05D003140 2.8e-22 109.4 104 55.8
AL6G44690 Arabidopsis lyrata HOM05D002613 ORTHO05D003140 3.7e-22 109.0 120 48.3
DCAR_018990 Daucus carota HOM05D002613 ORTHO05D003140 4.8e-22 108.6 122 50.8
Migut.N00611 Erythranthe guttata HOM05D002613 ORTHO05D003140 4.8e-22 108.6 136 45.6
Thhalv10028526m.g Eutrema salsugineum HOM05D002613 ORTHO05D003140 6.3e-22 108.2 120 50.0
ATR0749G082 Amborella trichopoda HOM05D002613 ORTHO05D003140 8.2e-22 107.8 108 53.7
BcaC04g21051 Brassica carinata HOM05D002613 ORTHO05D003140 2.4e-21 106.3 123 48.8
C09p36220 Brassica napus HOM05D002613 ORTHO05D003140 2.4e-21 106.3 123 48.8
BolC9t56460H Brassica oleracea HOM05D002613 ORTHO05D003140 2.4e-21 106.3 123 48.8
Zm00001eb311090 Zea mays HOM05D002613 ORTHO05D003140 9.1e-21 104.4 120 46.7
Ah.09g232210 Amaranthus hybridus HOM05D002613 ORTHO05D003140 1.6e-20 103.6 102 51.0
Sc25g0002890 Simmondsia chinensis HOM05D002613 ORTHO05D003140 1.6e-20 103.6 131 45.8
AUR62015924 Chenopodium quinoa HOM05D002613 ORTHO05D003140 2.6e-20 102.8 116 45.7
Os09g0364500 Oryza sativa ssp. japonica HOM05D002613 ORTHO05D003140 1.0e-19 100.9 137 43.1
CDE02G1852 Ceratophyllum demersum HOM05D002613 ORTHO05D003140 2.2e-19 99.8 123 47.2
SHI30469 Sapria himalayana HOM05D002613 ORTHO05D003140 2.2e-19 99.8 122 47.5
SalBow3G1390 Salvia bowleyana HOM05D002613 ORTHO05D003140 2.9e-19 99.4 113 49.6
unitig_26.g9582 Utricularia gibba HOM05D002613 ORTHO05D003140 1.9e-18 96.7 129 42.6
HPP92_007660 Vanilla planifolia HOM05D002613 ORTHO05D003140 3.2e-18 95.9 123 42.3
Migut.D02537 Erythranthe guttata HOM05D002613 ORTHO05D003140 7.2e-18 94.7 103 47.6
EL10Ac1g01558 Beta vulgaris HOM05D002613 ORTHO05D003140 1.2e-17 94.0 128 42.2
Hund21651 Selenicereus undatus HOM05D002613 ORTHO05D003140 1.2e-17 94.0 129 41.9
RcHm_v2.0_Chr5g0081271 Rosa chinensis HOM05D002613 ORTHO05D003140 1.6e-17 93.6 97 48.5
CAN.G140.36 Capsicum annuum HOM05D002613 ORTHO05D003140 1.0e-16 90.9 127 44.1
CDE01G0616 Ceratophyllum demersum HOM05D002613 ORTHO05D003140 2.3e-16 89.7 121 43.8
Lj2C680G1 Lonicera japonica HOM05D002613 ORTHO05D003140 4.0e-16 89.0 105 51.4
QL01p010229 Quercus lobata HOM05D002613 ORTHO05D337000 1.5e-15 87.0 44 100.0
vmacro20877 Vaccinium macrocarpon HOM05D002613 ORTHO05D003140 3.4e-15 85.9 102 52.0
SEGI_02585 Sequoiadendron giganteum HOM05D002613 ORTHO05D003140 1.7e-14 83.6 102 42.2
PSO173G0120 Papaver somniferum HOM05D002613 ORTHO05D003140 3.5e-12 75.9 102 43.1
COL.COLO4_21284 Corchorus olitorius HOM05D002613 ORTHO05D003140 7.2e-10 68.2 120 32.5
Dinv36334 Davidia involucrata HOM05D002613 ORTHO05D003140 1.2e-09 67.4 71 50.7
Eucgr.A02292 Eucalyptus grandis HOM05D002613 ORTHO05D003140 1.2e-09 67.4 114 34.2
Aqoxy3G02142 Aquilegia oxysepala HOM05D002613 ORTHO05D003140 3.6e-09 65.9 120 31.7
Gorai.006G134200 Gossypium raimondii HOM05D002613 ORTHO05D003140 6.1e-09 65.1 112 33.9
Thecc.05G144500 Theobroma cacao HOM05D002613 ORTHO05D003140 6.1e-09 65.1 113 32.7
A09p50120 Brassica napus HOM05D002613 ORTHO05D003140 8.0e-09 64.7 117 34.2
BraA09t40463Z Brassica rapa HOM05D002613 ORTHO05D003140 8.0e-09 64.7 117 34.2
Gohir.A09G119700 Gossypium hirsutum HOM05D002613 ORTHO05D003140 1.0e-08 64.3 112 33.9
BcaC07g40038 Brassica carinata HOM05D002613 ORTHO05D003140 1.4e-08 63.9 120 32.5
BcaC07g40067 Brassica carinata HOM05D002613 ORTHO05D003140 1.4e-08 63.9 120 32.5
C08p32490 Brassica napus HOM05D002613 ORTHO05D003140 1.4e-08 63.9 120 32.5
BolC8t50865H Brassica oleracea HOM05D002613 ORTHO05D003140 1.4e-08 63.9 120 32.5
Thhalv10005825m.g Eutrema salsugineum HOM05D002613 ORTHO05D003140 1.8e-08 63.5 115 33.9
Sp5g05390 Schrenkiella parvula HOM05D002613 ORTHO05D003140 1.8e-08 63.5 118 33.1
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 2.3e-08 63.2 112 34.8
Carub.0005s2400 Capsella rubella HOM05D002613 ORTHO05D003140 4.0e-08 62.4 115 33.0
Duzib128G0525 Durio zibethinus HOM05D002613 ORTHO05D003140 4.0e-08 62.4 111 33.3
SGA_v2.0_scaffold5G03102 Striga asiatica HOM05D002613 ORTHO05D003140 4.0e-08 62.4 114 34.2
Haze_19756 Corylus avellana HOM05D002613 ORTHO05D003140 5.2e-08 62.0 112 33.9
MBI16_g23766_MAGBIO Magnolia biondii HOM05D002613 ORTHO05D003140 8.8e-08 61.2 98 34.7
PSO063G3737 Papaver somniferum HOM05D002613 ORTHO05D003140 8.8e-08 61.2 111 31.5
unitig_22.g5420 Utricularia gibba HOM05D002613 ORTHO05D003140 8.8e-08 61.2 115 28.7
Sabra06G0030900 Salix brachista HOM05D002613 ORTHO05D003140 1.2e-07 60.8 98 33.7
TWI74G1367 Tripterygium wilfordii HOM05D002613 ORTHO05D003140 1.2e-07 60.8 125 34.4
Aa31LG10G12090 Aethionema arabicum HOM05D002613 ORTHO05D003140 1.5e-07 60.5 115 33.0
FAN05G3619 Fragaria x ananassa HOM05D002613 ORTHO05D003140 1.5e-07 60.5 110 30.9
FAN14G3278 Fragaria x ananassa HOM05D002613 ORTHO05D003140 1.5e-07 60.5 110 30.9
MD12G1089400 Malus domestica HOM05D002613 ORTHO05D003140 1.5e-07 60.5 110 30.9
Potri.006G044700 Populus trichocarpa HOM05D002613 ORTHO05D003140 1.5e-07 60.5 114 31.6
CARHR167360 Cardamine hirsuta HOM05D002613 ORTHO05D003140 2.0e-07 60.1 115 31.3
CDE10G0807 Ceratophyllum demersum HOM05D002613 ORTHO05D003140 2.0e-07 60.1 121 32.2
AL5G38670 Arabidopsis lyrata HOM05D002613 ORTHO05D003140 3.4e-07 59.3 118 30.5
Sopen04g004400 Solanum pennellii HOM05D002613 ORTHO05D003140 3.4e-07 59.3 115 30.4
vmacro21953 Vaccinium macrocarpon HOM05D002613 ORTHO05D003140 3.4e-07 59.3 118 32.2
GSVIVG01033559001 Vitis vinifera HOM05D002613 ORTHO05D003140 3.4e-07 59.3 120 30.0
arahy.Tifrunner.gnm1.ann1.TE5HJ9 Arachis hypogaea HOM05D002613 ORTHO05D003140 4.4e-07 58.9 114 31.6
CSS0039271 Camellia sinensis var. sinensis HOM05D002613 ORTHO05D003140 4.4e-07 58.9 115 32.2
Migut.B01406 Erythranthe guttata HOM05D002613 ORTHO05D003140 4.4e-07 58.9 115 32.2
Lsat_1_v5_gn_8_83061 Lactuca sativa HOM05D002613 ORTHO05D003140 4.4e-07 58.9 109 34.9
CiPaw.09G043000 Carya illinoinensis HOM05D002613 ORTHO05D003140 5.7e-07 58.5 110 30.9
Cc06_g18460 Coffea canephora HOM05D002613 ORTHO05D003140 5.7e-07 58.5 113 31.9
FAN02G3333 Fragaria x ananassa HOM05D002613 ORTHO05D003140 5.7e-07 58.5 110 30.0
Lalb_Chr25g0287031 Lupinus albus HOM05D002613 ORTHO05D003140 5.7e-07 58.5 125 28.8
Nitab4.5_0000771g0170 Nicotiana tabacum HOM05D002613 ORTHO05D003140 5.7e-07 58.5 118 29.7
Solyc04g009300.4 Solanum lycopersicum HOM05D002613 ORTHO05D003140 5.7e-07 58.5 115 30.4
Ca_08422_v3 Cicer arietinum L. HOM05D002613 ORTHO05D003140 7.5e-07 58.2 122 29.5
Dinv30285 Davidia involucrata HOM05D002613 ORTHO05D003140 7.5e-07 58.2 120 30.8
VMungo1383G0401 Vigna mungo HOM05D002613 ORTHO05D003140 7.5e-07 58.2 115 32.2
Zm00001eb196080 Zea mays HOM05D002613 ORTHO05D003140 7.5e-07 58.2 98 31.6
RcHm_v2.0_Chr3g0484591 Rosa chinensis HOM05D002613 ORTHO05D003140 9.8e-07 57.8 110 30.9
ATR0693G257 Amborella trichopoda HOM05D002613 ORTHO05D003140 1.7e-06 57.0 127 27.6
arahy.Tifrunner.gnm1.ann1.5ZDB9J Arachis hypogaea HOM05D002613 ORTHO05D003140 1.7e-06 57.0 114 29.8
arahy.Tifrunner.gnm1.ann1.9G159B Arachis hypogaea HOM05D002613 ORTHO05D003140 1.7e-06 57.0 114 29.8
Ciclev10004493m.g Citrus clementina HOM05D002613 ORTHO05D003140 1.7e-06 57.0 114 31.6
Rhsim03G0031300 Rhododendron simsii HOM05D002613 ORTHO05D003140 1.7e-06 57.0 113 31.9
DCAR_020533 Daucus carota HOM05D002613 ORTHO05D003140 2.2e-06 56.6 103 32.0
HanXRQChr04g0124961 Helianthus annuus HOM05D002613 ORTHO05D003140 2.2e-06 56.6 103 32.0
Manes.08G054900 Manihot esculenta HOM05D002613 ORTHO05D003140 2.2e-06 56.6 112 30.4
ECA236G1356 Erigeron canadensis HOM05D002613 ORTHO05D003140 2.8e-06 56.2 103 32.0
Oeu042057.1 Olea europaea HOM05D002613 ORTHO05D003140 2.8e-06 56.2 115 28.7
Os06g0498900 Oryza sativa ssp. japonica HOM05D002613 ORTHO05D003140 2.8e-06 56.2 98 29.6
Phvul.001G128000 Phaseolus vulgaris HOM05D002613 ORTHO05D003140 2.8e-06 56.2 115 30.4
Psat3g075680 Pisum sativum HOM05D002613 ORTHO05D003140 2.8e-06 56.2 114 28.9
Prupe.7G049400 Prunus persica HOM05D002613 ORTHO05D003140 2.8e-06 56.2 110 30.0
Atru.chr1.1250 Acer truncatum HOM05D002613 ORTHO05D003140 3.7e-06 55.8 121 28.9
MSTRG.17075 Avicennia marina HOM05D002613 ORTHO05D003140 3.7e-06 55.8 97 30.9
HanXRQChr04g0121301 Helianthus annuus HOM05D002613 ORTHO05D003140 3.7e-06 55.8 97 32.0
Ah.13g076720 Amaranthus hybridus HOM05D002613 ORTHO05D003140 4.9e-06 55.5 113 31.0
AUR62026142 Chenopodium quinoa HOM05D002613 ORTHO05D003140 4.9e-06 55.5 115 29.6
Nitab4.5_0005356g0070 Nicotiana tabacum HOM05D002613 ORTHO05D003140 4.9e-06 55.5 100 31.0
PGSC0003DMG400032543 Solanum tuberosum HOM05D002613 ORTHO05D003140 8.3e-06 54.7 132 28.0


User provided reference genes

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